Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31023 Sequoiadendron giganteum HOM05D005061 ORTHO05D006001 1.9e-82 309.3 175 100.0
HPP92_021062 Vanilla planifolia HOM05D005061 ORTHO05D006001 1.3e-22 110.5 155 45.8
TAR636G2803 Trochodendron aralioides HOM05D005061 ORTHO05D006001 1.6e-20 103.6 154 40.3
Glyma.18G297700 Glycine max HOM05D005061 ORTHO05D006001 4.6e-20 102.1 155 38.7
COL.COLO4_20183 Corchorus olitorius HOM05D005061 ORTHO05D006001 6.0e-20 101.7 150 40.7
TAR624G0493 Trochodendron aralioides HOM05D002455 ORTHO05D006001 7.8e-20 101.3 155 39.4
PSO541G4502 Papaver somniferum HOM05D005061 ORTHO05D006001 1.0e-19 100.9 157 40.1
PSO675G5536 Papaver somniferum HOM05D005061 ORTHO05D006001 2.3e-19 99.8 157 38.9
Glyma.08G364400 Glycine max HOM05D005061 ORTHO05D006001 6.6e-19 98.2 155 36.8
SGA_v2.0_scaffold90G27899 Striga asiatica HOM05D005061 ORTHO05D006001 6.6e-19 98.2 153 36.6
Psat6g003280 Pisum sativum HOM05D005061 ORTHO05D006001 2.5e-18 96.3 152 39.5
CDE04G1543 Ceratophyllum demersum HOM05D005061 ORTHO05D006001 4.3e-18 95.5 155 38.7
SGA_v2.0_scaffold128G34119 Striga asiatica HOM05D005061 ORTHO05D006001 4.3e-18 95.5 153 35.9
Cpa.g.sc170.49 Carica papaya HOM05D005061 ORTHO05D006001 9.5e-18 94.4 151 39.7
TPR.G26387 Trifolium pratense HOM05D005061 ORTHO05D006001 1.2e-17 94.0 180 35.6
CDE07G0811 Ceratophyllum demersum HOM05D005061 ORTHO05D006001 2.1e-17 93.2 151 37.7
Lj8A15T45 Lonicera japonica HOM05D005061 ORTHO05D006001 2.1e-17 93.2 148 37.2
Migut.G00717 Erythranthe guttata HOM05D005061 ORTHO05D006001 4.7e-17 92.0 152 35.5
unitig_26.g9510 Utricularia gibba HOM05D005061 ORTHO05D006001 4.7e-17 92.0 154 35.1
Gohir.D10G140500 Gossypium hirsutum HOM05D005061 ORTHO05D006001 6.2e-17 91.7 143 39.2
Lj1g0023949 Lotus japonicus HOM05D005061 ORTHO05D006001 6.2e-17 91.7 149 36.9
Lj1g0014719 Lotus japonicus HOM05D005061 ORTHO05D006001 1.1e-16 90.9 149 36.9
SalBow8G4870 Salvia bowleyana HOM05D005061 ORTHO05D006001 1.8e-16 90.1 149 36.9
TPR.G1371 Trifolium pratense HOM05D005061 ORTHO05D006001 1.8e-16 90.1 180 35.0
PGR042G2541 Punica granatum HOM05D005061 ORTHO05D006001 2.3e-16 89.7 150 38.0
Os11g0148600 Oryza sativa ssp. japonica HOM05D005061 ORTHO05D006001 4.0e-16 89.0 155 38.1
CSS0003459 Camellia sinensis var. sinensis HOM05D005061 ORTHO05D006001 5.2e-16 88.6 187 32.6
Cc03_g08040 Coffea canephora HOM05D005061 ORTHO05D006001 5.2e-16 88.6 148 37.8
Prupe.1G159300 Prunus persica HOM05D005061 ORTHO05D006001 5.2e-16 88.6 155 38.1
Lalb_Chr01g0000091 Lupinus albus HOM05D005061 ORTHO05D006001 6.8e-16 88.2 148 39.2
Carub.0008s0903 Capsella rubella HOM05D005061 ORTHO05D006001 8.9e-16 87.8 149 38.9
ECA247G1905 Erigeron canadensis HOM05D005061 ORTHO05D006001 1.2e-15 87.4 144 36.8
Manes.10G081400 Manihot esculenta HOM05D005061 ORTHO05D006001 1.5e-15 87.0 148 37.8
Gorai.011G156100 Gossypium raimondii HOM05D005061 ORTHO05D006001 2.6e-15 86.3 137 38.7
Manes.02G208300 Manihot esculenta HOM05D005061 ORTHO05D006001 2.6e-15 86.3 149 37.6
Dinv38211 Davidia involucrata HOM05D005061 ORTHO05D006001 3.4e-15 85.9 150 34.0
Hund18997 Selenicereus undatus HOM05D005061 ORTHO05D006001 3.4e-15 85.9 156 35.9
MD14G1080700 Malus domestica HOM05D005061 ORTHO05D006001 9.9e-15 84.3 156 38.5
MD12G1086100 Malus domestica HOM05D005061 ORTHO05D006001 1.7e-14 83.6 155 38.1
Medtr1g025570 Medicago truncatula HOM05D005061 ORTHO05D006001 1.7e-14 83.6 152 36.8
RcHm_v2.0_Chr4g0414321 Rosa chinensis HOM05D005061 ORTHO05D006001 1.7e-14 83.6 156 37.2
AL8G22790 Arabidopsis lyrata HOM05D005061 ORTHO05D006001 2.2e-14 83.2 149 37.6
Thhalv10004918m.g Eutrema salsugineum HOM05D005061 ORTHO05D006001 2.2e-14 83.2 149 36.9
Gohir.A10G126200 Gossypium hirsutum HOM05D005061 ORTHO05D006001 2.2e-14 83.2 143 37.8
FvH4_4g13570 Fragaria vesca HOM05D005061 ORTHO05D006001 2.9e-14 82.8 155 36.8
MSTRG.9809 Avicennia marina HOM05D005061 ORTHO05D006001 3.7e-14 82.4 149 33.6
Zm00001eb092840 Zea mays HOM05D005061 ORTHO05D006001 3.7e-14 82.4 155 38.1
A06p38500 Brassica napus HOM05D005061 ORTHO05D006001 4.9e-14 82.0 150 38.7
FAN07G0218 Fragaria x ananassa HOM05D005061 ORTHO05D006001 4.9e-14 82.0 155 36.8
AT5G49210 Arabidopsis thaliana HOM05D005061 ORTHO05D006001 6.4e-14 81.6 143 37.1
CANSAT78G0571 Cannabis sativa HOM05D005061 ORTHO05D006001 6.4e-14 81.6 154 38.3
Eucgr.G02600 Eucalyptus grandis HOM05D005061 ORTHO05D006001 6.4e-14 81.6 155 33.5
BcaC06g30707 Brassica carinata HOM05D005061 ORTHO05D006001 8.4e-14 81.3 150 37.3
Phvul.008G004900 Phaseolus vulgaris HOM05D005061 ORTHO05D006001 1.4e-13 80.5 152 33.6
FAN22G0582 Fragaria x ananassa HOM05D005061 ORTHO05D006001 1.9e-13 80.1 156 35.9
Cpa.g.sc150.53 Carica papaya HOM05D005061 ORTHO05D006001 2.4e-13 79.7 143 37.1
BcaNung02589 Brassica carinata HOM05D005061 ORTHO05D006001 4.1e-13 79.0 150 38.0
C07p39760 Brassica napus HOM05D005061 ORTHO05D006001 4.1e-13 79.0 150 38.0
BraA06t26765Z Brassica rapa HOM05D005061 ORTHO05D006001 4.1e-13 79.0 150 38.0
CARHR182460 Cardamine hirsuta HOM05D005061 ORTHO05D006001 5.4e-13 78.6 146 38.4
EL10Ac9g22415 Beta vulgaris HOM05D005061 ORTHO05D006001 7.1e-13 78.2 144 36.8
FAN17G0047 Fragaria x ananassa HOM05D005061 ORTHO05D006001 3.5e-12 75.9 154 33.8
Aa31LG11G8230 Aethionema arabicum HOM05D005061 ORTHO05D006001 4.6e-12 75.5 151 37.1
Aqoxy1G01140 Aquilegia oxysepala HOM05D005061 ORTHO05D006001 4.6e-12 75.5 151 33.8
HanXRQChr13g0420931 Helianthus annuus HOM05D005061 ORTHO05D006001 6.0e-12 75.1 151 31.8
AUR62006500 Chenopodium quinoa HOM05D005061 ORTHO05D006001 7.8e-12 74.7 145 33.8
QL01p037004 Quercus lobata HOM05D005061 ORTHO05D006001 7.8e-12 74.7 154 37.7
QL07p041720 Quercus lobata HOM05D005061 ORTHO05D006001 1.0e-11 74.3 154 38.3
Hma1.2p1_0383F.1_g140630 Hydrangea macrophylla HOM05D005061 ORTHO05D006001 1.7e-11 73.6 145 33.1
BcaC03g17706 Brassica carinata HOM05D005061 ORTHO05D006001 3.0e-11 72.8 149 36.2
C02p57130 Brassica napus HOM05D005061 ORTHO05D006001 3.0e-11 72.8 149 36.2
Sc19g0007290 Simmondsia chinensis HOM05D005061 ORTHO05D006001 3.9e-11 72.4 148 35.1
Psat3g206160 Pisum sativum HOM05D005061 ORTHO05D006001 8.6e-11 71.2 152 34.9
EL10Ac9g22416 Beta vulgaris HOM05D005061 ORTHO05D006001 1.5e-10 70.5 136 36.0
Atru.chr4.1296 Acer truncatum HOM05D005061 ORTHO05D006001 1.9e-10 70.1 150 35.3
Duzib212G0867 Durio zibethinus HOM05D005061 ORTHO05D006001 1.9e-10 70.1 149 32.2
Rhsim02G0060400 Rhododendron simsii HOM05D005061 ORTHO05D006001 5.6e-10 68.6 213 27.7
Peaxi162Scf00423g00316 Petunia axillaris HOM05D005061 ORTHO05D006001 9.6e-10 67.8 157 31.8
Migut.N00403 Erythranthe guttata HOM05D005061 ORTHO05D006001 1.6e-09 67.0 160 28.1
GSVIVG01020921001 Vitis vinifera HOM05D005061 ORTHO05D006001 1.6e-09 67.0 161 31.1
Solyc05g053730.3 Solanum lycopersicum HOM05D005061 ORTHO05D006001 2.8e-09 66.2 150 30.7
Pp3c15_23810 Physcomitrium patens HOM05D024020 ORTHO05D023538 4.7e-09 65.5 132 34.8
Pp3c15_23812 Physcomitrium patens HOM05D024020 ORTHO05D023538 4.7e-09 65.5 132 34.8
Ciclev10005973m.g Citrus clementina HOM05D005061 ORTHO05D006001 8.1e-09 64.7 154 29.9
Sopen05g032210 Solanum pennellii HOM05D005061 ORTHO05D006001 8.1e-09 64.7 150 30.0
PGSC0003DMG400015756 Solanum tuberosum HOM05D005061 ORTHO05D006001 8.1e-09 64.7 150 30.0
Ca_04063_v3 Cicer arietinum L. HOM05D005061 ORTHO05D006001 1.4e-08 63.9 152 31.6
Ca_04069_v3 Cicer arietinum L. HOM05D005061 ORTHO05D006001 1.4e-08 63.9 152 31.6
BcaB07g34140 Brassica carinata HOM05D005061 ORTHO05D006001 6.8e-08 61.6 150 33.3
A02p37930 Brassica napus HOM05D005061 ORTHO05D006001 6.8e-08 61.6 149 33.6
AUR62025033 Chenopodium quinoa HOM05D005061 ORTHO05D006001 6.8e-08 61.6 187 27.8
Sp2g19580 Schrenkiella parvula HOM05D005061 ORTHO05D006001 6.8e-08 61.6 149 31.5
BraA02t08777Z Brassica rapa HOM05D005061 ORTHO05D006001 8.9e-08 61.2 149 33.6
Medtr7g407030 Medicago truncatula HOM05D005061 ORTHO05D006001 8.9e-08 61.2 152 29.6
MSTRG.4232 Avicennia marina HOM05D005061 ORTHO05D006001 1.5e-07 60.5 161 28.6
DCAR_026627 Daucus carota HOM05D005061 ORTHO05D006001 2.0e-07 60.1 123 35.0
VMungo1383G0426 Vigna mungo HOM05D005061 ORTHO05D006001 3.4e-07 59.3 141 29.8
Oeu006186.1 Olea europaea HOM05D005061 ORTHO05D006001 4.4e-07 58.9 109 37.6
THA.LOC104808705 Tarenaya hassleriana HOM05D005061 ORTHO05D006001 5.8e-07 58.5 148 29.1
arahy.Tifrunner.gnm1.ann1.B38FIW Arachis hypogaea HOM05D005061 ORTHO05D006001 2.2e-06 56.6 145 30.3
arahy.Tifrunner.gnm1.ann1.V03Z72 Arachis hypogaea HOM05D005061 ORTHO05D006001 2.2e-06 56.6 145 30.3
Sed0002608 Sechium edule HOM05D005061 ORTHO05D006001 2.9e-06 56.2 149 30.2
Nitab4.5_0003502g0080 Nicotiana tabacum HOM05D005061 ORTHO05D006001 3.8e-06 55.8 151 29.1


User provided reference genes

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