Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25854 Sequoiadendron giganteum HOM05D000093 ORTHO05D009660 1.0e-63 246.5 122 100.0
SEGI_32128 Sequoiadendron giganteum HOM05D000093 ORTHO05D000605 1.5e-33 146.4 125 66.4
SEGI_15448 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 1.7e-29 132.9 98 66.3
SEGI_11906 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 3.2e-28 128.6 98 64.3
SEGI_16464 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 4.2e-12 75.1 120 40.8
ATR0796G215 Amborella trichopoda HOM05D000093 ORTHO05D007434 4.6e-11 71.6 123 33.3
SEGI_11748 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 7.9e-11 70.9 120 39.2
SEGI_26490 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 1.0e-10 70.5 123 39.0
SEGI_25388 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 1.3e-10 70.1 68 55.9
SEGI_07187 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 2.3e-10 69.3 120 39.2
SEGI_28870 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 3.0e-10 68.9 126 37.3
SEGI_14857 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 1.1e-09 67.0 121 38.8
SEGI_16118 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 1.9e-09 66.2 100 37.0
Nitab4.5_0000434g0110 Nicotiana tabacum HOM05D000093 ORTHO05D000605 2.5e-09 65.9 126 37.3
SEGI_06456 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 4.3e-09 65.1 70 51.4
SEGI_41499 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 4.3e-09 65.1 123 37.4
SEGI_20224 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 1.6e-08 63.2 69 50.7
SEGI_26010 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 1.6e-08 63.2 69 50.7
SEGI_03508 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 2.8e-08 62.4 68 48.5
SEGI_19521 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 2.8e-08 62.4 125 34.4
SEGI_31762 Sequoiadendron giganteum HOM05D000379 ORTHO05D000254 3.7e-08 62.0 32 84.4
SEGI_34829 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 3.7e-08 62.0 67 50.7
SEGI_37770 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 3.7e-08 62.0 67 50.7
SGA_v2.0_scaffold71G23776 Striga asiatica HOM05D000093 ORTHO05D000605 3.7e-08 62.0 95 36.8
COL.COLO4_22090 Corchorus olitorius HOM05D000093 ORTHO05D000605 4.8e-08 61.6 80 42.5
SEGI_16224 Sequoiadendron giganteum HOM05D001707 ORTHO05D001694 4.8e-08 61.6 30 86.7
SEGI_40806 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 6.2e-08 61.2 67 49.3
SEGI_02165 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 8.1e-08 60.8 28 92.9
SEGI_19943 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 8.1e-08 60.8 67 49.3
SEGI_32924 Sequoiadendron giganteum HOM05D000093 ORTHO05D000605 8.1e-08 60.8 74 44.6
SEGI_40124 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 8.1e-08 60.8 28 92.9
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 1.8e-07 59.7 123 33.3
SEGI_02366 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 2.4e-07 59.3 57 54.4
SEGI_05495 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 2.4e-07 59.3 72 44.4
SEGI_25443 Sequoiadendron giganteum HOM05D000031 ORTHO05D050962 2.4e-07 59.3 32 78.1
SEGI_29901 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.4e-07 59.3 31 80.6
COL.COLO4_13240 Corchorus olitorius HOM05D000093 ORTHO05D007434 5.3e-07 58.2 81 39.5
SEGI_25823 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 9.0e-07 57.4 28 85.7
Cpa.g.sc18.219 Carica papaya HOM05D000093 ORTHO05D000835 1.5e-06 56.6 99 35.4
Nitab4.5_0003768g0050 Nicotiana tabacum HOM05D000093 ORTHO05D000835 1.5e-06 56.6 91 33.0
SEGI_20010 Sequoiadendron giganteum HOM05D002310 ORTHO05D002326 1.5e-06 56.6 27 88.9
Haze_08939 Corylus avellana HOM05D000093 ORTHO05D000835 2.0e-06 56.2 92 35.9
MBI10_g15927_MAGBIO Magnolia biondii HOM05D000093 ORTHO05D000605 2.6e-06 55.8 95 36.8
SEGI_14589 Sequoiadendron giganteum HOM05D000026 ORTHO05D000094 2.6e-06 55.8 27 88.9
Rhsim08G0114900 Rhododendron simsii HOM05D000093 ORTHO05D000605 3.4e-06 55.5 93 38.7
SEGI_10954 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 4.5e-06 55.1 69 46.4
SEGI_14904 Sequoiadendron giganteum HOM05D000093 ORTHO05D000605 4.5e-06 55.1 74 40.5
THA.LOC104826953 Tarenaya hassleriana HOM05D000093 ORTHO05D000605 4.5e-06 55.1 123 34.1
SEGI_05642 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 5.8e-06 54.7 74 41.9
SEGI_09844 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 5.8e-06 54.7 30 83.3
PGSC0003DMG400014902 Solanum tuberosum HOM05D000093 ORTHO05D000605 5.8e-06 54.7 136 34.6
AUR62031156 Chenopodium quinoa HOM05D000093 ORTHO05D000835 7.6e-06 54.3 102 30.4
Ciclev10031449m.g Citrus clementina HOM05D000093 ORTHO05D002784 7.6e-06 54.3 130 30.0
SEGI_19576 Sequoiadendron giganteum HOM05D000093 ORTHO05D000605 7.6e-06 54.3 132 32.6
CAN.G358.100 Capsicum annuum HOM05D000093 ORTHO05D000605 1.0e-05 53.9 136 34.6


User provided reference genes

Program Settings