Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 2.7e-88 328.6 160 100.0
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 3.4e-30 135.6 108 58.3
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 7.6e-30 134.4 108 59.3
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 9.9e-30 134.0 129 50.4
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 1.3e-29 133.7 107 58.9
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 1.3e-29 133.7 108 56.5
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 2.9e-29 132.5 105 58.1
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 2.9e-29 132.5 107 58.9
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 8.4e-29 131.0 108 58.3
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 1.1e-28 130.6 108 57.4
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 1.4e-28 130.2 108 58.3
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 1.9e-28 129.8 107 57.9
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 2.4e-28 129.4 108 57.4
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 2.4e-28 129.4 108 55.6
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 2.4e-28 129.4 108 57.4
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 3.2e-28 129.0 108 55.6
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 3.2e-28 129.0 132 50.8
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 4.2e-28 128.6 108 57.4
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 5.4e-28 128.3 108 53.7
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 7.1e-28 127.9 108 53.7
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 7.1e-28 127.9 108 56.5
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 7.1e-28 127.9 107 56.1
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 1.2e-27 127.1 130 50.8
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 1.2e-27 127.1 132 49.2
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 1.2e-27 127.1 102 58.8
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 1.6e-27 126.7 107 55.1
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 2.7e-27 125.9 107 57.0
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 4.6e-27 125.2 108 52.8
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 4.6e-27 125.2 107 57.0
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 6.0e-27 124.8 107 57.0
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 6.0e-27 124.8 109 56.0
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 7.9e-27 124.4 108 54.6
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 1.0e-26 124.0 108 50.9
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 1.0e-26 124.0 107 56.1
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 1.0e-26 124.0 108 56.5
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 1.8e-26 123.2 107 56.1
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 1.8e-26 123.2 125 48.0
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 1.8e-26 123.2 108 55.6
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 1.8e-26 123.2 105 55.2
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 3.0e-26 122.5 125 52.0
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 3.0e-26 122.5 125 52.0
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 3.0e-26 122.5 107 55.1
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 3.0e-26 122.5 108 52.8
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 3.9e-26 122.1 108 57.4
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 3.9e-26 122.1 108 55.6
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 5.1e-26 121.7 106 53.8
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 5.1e-26 121.7 107 53.3
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 5.1e-26 121.7 108 54.6
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 6.7e-26 121.3 107 54.2
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 6.7e-26 121.3 108 52.8
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 8.7e-26 120.9 108 51.9
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 8.7e-26 120.9 108 50.0
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 1.1e-25 120.6 102 55.9
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 1.1e-25 120.6 108 53.7
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 2.5e-25 119.4 127 48.8
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 2.5e-25 119.4 107 54.2
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 2.5e-25 119.4 108 54.6
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 3.3e-25 119.0 107 57.0
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 4.3e-25 118.6 105 54.3
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 4.3e-25 118.6 100 55.0
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 4.3e-25 118.6 107 54.2
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 5.6e-25 118.2 105 54.3
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 7.4e-25 117.9 108 50.0
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 7.4e-25 117.9 107 54.2
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 9.6e-25 117.5 107 53.3
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 9.6e-25 117.5 108 51.9
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 1.3e-24 117.1 106 54.7
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 1.3e-24 117.1 118 49.2
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 1.3e-24 117.1 108 50.9
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 1.6e-24 116.7 127 48.0
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 1.6e-24 116.7 102 56.9
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 1.6e-24 116.7 102 56.9
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 1.6e-24 116.7 107 56.1
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 2.8e-24 115.9 113 49.6
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 3.7e-24 115.5 108 52.8
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 3.7e-24 115.5 108 50.9
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 6.2e-24 114.8 102 55.9
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 1.4e-23 113.6 112 49.1
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 2.4e-23 112.8 112 47.3
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 2.4e-23 112.8 112 47.3
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 3.1e-23 112.5 102 50.0
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 3.1e-23 112.5 113 49.6
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 3.1e-23 112.5 108 51.9
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 9.0e-23 110.9 110 50.0
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 9.0e-23 110.9 106 48.1
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 1.5e-22 110.2 112 48.2
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 1.5e-22 110.2 84 60.7
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 2.6e-22 109.4 105 49.5
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 2.6e-22 109.4 124 46.8
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 4.5e-22 108.6 108 50.0
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 4.5e-22 108.6 112 47.3
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 5.8e-22 108.2 136 44.9
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 9.9e-22 107.5 102 51.0
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 9.9e-22 107.5 105 48.6
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 1.3e-21 107.1 139 41.0
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 1.7e-21 106.7 105 49.5
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 2.2e-21 106.3 102 50.0
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 2.2e-21 106.3 105 49.5
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 4.2e-20 102.1 100 51.0
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 1.6e-19 100.1 77 58.4
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 1.6e-19 100.1 105 47.6
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 2.7e-19 99.4 109 45.9
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 3.5e-19 99.0 102 51.0
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 7.9e-19 97.8 73 60.3
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 5.3e-15 85.1 105 41.0
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 6.9e-15 84.7 114 40.4
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 9.3e-12 74.3 77 42.9
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 2.8e-08 62.8 129 34.1
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 3.7e-08 62.4 96 36.5


User provided reference genes

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