Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 1.0e-249 866.3 455 100.0
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 1.2e-83 314.7 363 48.2
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 1.7e-82 310.8 348 47.4
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 1.7e-82 310.8 365 44.7
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 8.4e-82 308.5 344 46.5
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.1e-81 308.1 391 44.5
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.1e-81 308.1 391 44.5
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 7.1e-81 305.4 381 43.0
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.3e-79 301.2 345 46.1
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 2.8e-77 293.5 375 42.9
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 8.1e-77 292.0 344 43.6
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 1.1e-76 291.6 344 44.8
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 1.8e-76 290.8 344 44.5
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 5.3e-76 289.3 373 42.9
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 5.3e-76 289.3 348 43.1
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 1.2e-75 288.1 382 42.4
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 2.6e-75 287.0 365 43.6
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 3.8e-74 283.1 374 41.7
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 4.9e-74 282.7 349 44.7
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 4.9e-74 282.7 347 42.7
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 6.4e-74 282.3 366 44.3
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 1.1e-73 281.6 410 40.2
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 9.3e-73 278.5 340 44.4
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 1.2e-72 278.1 375 42.4
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 2.1e-72 277.3 369 42.3
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 2.1e-72 277.3 366 41.5
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 2.7e-72 276.9 335 45.1
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 2.7e-72 276.9 366 42.1
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 3.5e-72 276.6 380 41.3
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 7.8e-72 275.4 388 41.0
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 3.9e-71 273.1 354 42.9
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 3.9e-71 273.1 354 42.9
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 8.7e-71 271.9 350 43.1
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.1e-70 271.6 347 42.9
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 1.5e-70 271.2 349 43.0
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 2.5e-70 270.4 444 38.7
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 4.3e-70 269.6 344 42.4
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 5.6e-70 269.2 354 42.4
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 2.1e-69 267.3 369 41.5
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 2.1e-69 267.3 344 41.9
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 4.8e-69 266.2 361 40.2
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 6.2e-69 265.8 356 42.1
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 6.2e-69 265.8 344 41.6
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 1.4e-68 264.6 356 41.6
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 1.4e-68 264.6 381 39.4
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 1.8e-68 264.2 377 40.6
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 6.9e-68 262.3 386 40.7
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 6.9e-68 262.3 344 41.0
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 1.5e-67 261.2 366 40.7
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 2.6e-67 260.4 404 39.4
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 9.9e-67 258.5 344 39.8
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 9.9e-67 258.5 335 41.5
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 1.7e-66 257.7 344 41.0
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 6.4e-66 255.8 352 40.3
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 8.4e-66 255.4 312 43.9
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 1.4e-65 254.6 348 42.0
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 3.2e-65 253.4 382 38.7
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 3.2e-65 253.4 344 39.0
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 9.3e-65 251.9 435 36.6
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.2e-64 251.5 435 36.6
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 1.6e-64 251.1 430 36.7
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 2.1e-64 250.8 389 39.1
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 2.7e-64 250.4 378 38.1
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 7.9e-64 248.8 381 39.6
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 2.3e-63 247.3 344 40.1
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 2.3e-63 247.3 378 37.6
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 3.3e-62 243.4 345 39.1
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 3.3e-62 243.4 313 40.3
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 4.0e-60 236.5 480 34.2
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.3e-58 231.5 369 39.0
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 1.0e-55 221.9 305 40.3
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 5.1e-55 219.5 384 38.8
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 7.4e-54 215.7 301 41.2
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.8e-52 211.1 237 47.3
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 4.0e-52 209.9 384 33.3
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 3.2e-49 200.3 346 36.1
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 2.1e-48 197.6 345 35.4
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 1.0e-47 195.3 299 38.8
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 3.9e-47 193.4 302 36.1
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 7.4e-46 189.1 280 41.4
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 2.8e-45 187.2 305 36.7
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 2.4e-44 184.1 241 39.8
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.5e-43 181.4 280 39.6
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.0e-42 178.7 279 38.7
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 6.5e-42 176.0 185 44.9
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 2.2e-34 151.0 277 35.4
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 6.5e-34 149.4 166 45.2
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 4.8e-29 133.3 209 37.8
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 5.5e-25 119.8 161 41.0
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 9.1e-20 102.4 345 27.2
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 2.2e-13 81.3 281 27.0
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 3.7e-13 80.5 111 38.7
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 6.5e-10 69.7 298 23.2
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.5e-09 68.6 94 44.7
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 5.5e-09 66.6 71 47.9
Cre07.g355550 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 1.4e-07 62.0 324 21.9
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 5.2e-07 60.1 92 37.0


User provided reference genes

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