Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16106 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 9.6e-58 226.5 104 100.0
SEGI_21889 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 5.4e-53 210.7 104 93.3
SEGI_26855 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 9.3e-53 209.9 104 92.3
SEGI_27650 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 4.8e-33 144.4 105 61.9
SEGI_32242 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 1.0e-27 126.7 108 59.3
SEGI_31567 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 1.0e-19 100.1 106 47.2
TAR362G0290 Trochodendron aralioides HOM05D001305 ORTHO05D007147 1.8e-19 99.4 107 48.6
PGR044G0094 Punica granatum HOM05D001305 ORTHO05D007147 2.3e-19 99.0 100 49.0
PGR044G1888 Punica granatum HOM05D001305 ORTHO05D007147 2.3e-19 99.0 100 49.0
CiPaw.07G092700 Carya illinoinensis HOM05D001305 ORTHO05D007147 5.1e-19 97.8 108 46.3
FvH4_2g23740 Fragaria vesca HOM05D001305 ORTHO05D007147 2.5e-18 95.5 100 48.0
FAN24G2931 Fragaria x ananassa HOM05D001305 ORTHO05D007147 2.5e-18 95.5 100 48.0
RcHm_v2.0_Chr6g0291231 Rosa chinensis HOM05D001305 ORTHO05D007147 2.5e-18 95.5 100 48.0
ATR0626G411 Amborella trichopoda HOM05D001305 ORTHO05D007147 3.3e-18 95.1 107 46.7
CSS0001600 Camellia sinensis var. sinensis HOM05D001305 ORTHO05D007147 3.3e-18 95.1 106 46.2
Dinv11244 Davidia involucrata HOM05D001305 ORTHO05D007147 3.3e-18 95.1 107 45.8
FAN15G0462 Fragaria x ananassa HOM05D001305 ORTHO05D007147 4.3e-18 94.7 100 48.0
Prupe.8G242700 Prunus persica HOM05D001305 ORTHO05D007147 4.3e-18 94.7 106 47.2
Potri.005G208200 Populus trichocarpa HOM05D001305 ORTHO05D007147 5.7e-18 94.4 107 46.7
QL12p022121 Quercus lobata HOM05D001305 ORTHO05D007147 5.7e-18 94.4 100 47.0
FAN27G1515 Fragaria x ananassa HOM05D001305 ORTHO05D007147 7.4e-18 94.0 100 47.0
HanXRQChr10g0282771 Helianthus annuus HOM05D001305 ORTHO05D007147 7.4e-18 94.0 108 45.4
MD03G1267000 Malus domestica HOM05D001305 ORTHO05D007147 7.4e-18 94.0 106 47.2
Lsat_1_v5_gn_9_4061 Lactuca sativa HOM05D001305 ORTHO05D007147 9.7e-18 93.6 107 44.9
Lj1A46T42 Lonicera japonica HOM05D001305 ORTHO05D007147 9.7e-18 93.6 108 44.4
Nn1g02184 Nelumbo nucifera HOM05D001305 ORTHO05D007147 1.3e-17 93.2 102 44.1
TAR633G1115 Trochodendron aralioides HOM05D001305 ORTHO05D007147 1.3e-17 93.2 107 44.9
Cfa006127 Carpinus fangiana HOM05D001305 ORTHO05D007147 1.6e-17 92.8 100 46.0
Haze_04727 Corylus avellana HOM05D001305 ORTHO05D007147 1.6e-17 92.8 100 46.0
FAN20G1604 Fragaria x ananassa HOM05D001305 ORTHO05D007147 2.2e-17 92.4 100 47.0
Glyma.19G154800 Glycine max HOM05D001305 ORTHO05D007147 2.2e-17 92.4 100 45.0
Glyma.03G152300 Glycine max HOM05D001305 ORTHO05D007147 2.8e-17 92.0 108 42.6
Manes.01G208700 Manihot esculenta HOM05D001305 ORTHO05D007147 4.8e-17 91.3 100 46.0
Actinidia24883 Actinidia chinensis HOM05D001305 ORTHO05D007147 6.3e-17 90.9 100 45.0
MBI17_g40298_MAGBIO Magnolia biondii HOM05D001305 ORTHO05D007147 6.3e-17 90.9 102 43.1
SEGI_09392 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 6.3e-17 90.9 106 50.9
Aqoxy2G03288 Aquilegia oxysepala HOM05D001305 ORTHO05D007147 1.1e-16 90.1 108 40.7
CANSAT25G2734 Cannabis sativa HOM05D001305 ORTHO05D007147 1.1e-16 90.1 108 44.4
HanXRQChr04g0118771 Helianthus annuus HOM05D001305 ORTHO05D007147 1.1e-16 90.1 107 44.9
Lj5g0015050 Lotus japonicus HOM05D001305 ORTHO05D007147 1.1e-16 90.1 115 40.9
ECA247G2715 Erigeron canadensis HOM05D001305 ORTHO05D007147 1.4e-16 89.7 101 46.5
VMungo1383G0438 Vigna mungo HOM05D001305 ORTHO05D007147 1.4e-16 89.7 108 39.8
Phvul.001G149900 Phaseolus vulgaris HOM05D001305 ORTHO05D007147 1.8e-16 89.4 108 41.7
Potri.002G054500 Populus trichocarpa HOM05D001305 ORTHO05D007147 1.8e-16 89.4 107 43.9
arahy.Tifrunner.gnm1.ann1.9RJM5Z Arachis hypogaea HOM05D001305 ORTHO05D007147 2.4e-16 89.0 105 44.8
arahy.Tifrunner.gnm1.ann1.P1GWNH Arachis hypogaea HOM05D001305 ORTHO05D007147 2.4e-16 89.0 105 44.8
Ciclev10023799m.g Citrus clementina HOM05D001305 ORTHO05D007147 3.1e-16 88.6 98 45.9
DCAR_002742 Daucus carota HOM05D001305 ORTHO05D007147 4.1e-16 88.2 105 43.8
Eucgr.K03377 Eucalyptus grandis HOM05D001305 ORTHO05D007147 4.1e-16 88.2 100 43.0
Lalb_Chr02g0142801 Lupinus albus HOM05D001305 ORTHO05D007147 4.1e-16 88.2 100 43.0
Sabra02G0044300 Salix brachista HOM05D001305 ORTHO05D007147 4.1e-16 88.2 100 45.0
SEGI_17994 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 4.1e-16 88.2 101 44.6
VMungo0720G2940 Vigna mungo HOM05D001305 ORTHO05D007147 4.1e-16 88.2 115 40.9
DCAR_018416 Daucus carota HOM05D001305 ORTHO05D007147 5.3e-16 87.8 105 42.9
Ca_09762_v3 Cicer arietinum L. HOM05D001305 ORTHO05D007147 6.9e-16 87.4 111 41.4
ECA236G2531 Erigeron canadensis HOM05D001305 ORTHO05D007147 6.9e-16 87.4 106 42.5
Oeu022879.1 Olea europaea HOM05D001305 ORTHO05D007147 6.9e-16 87.4 103 43.7
PSO302G0139 Papaver somniferum HOM05D001305 ORTHO05D007147 6.9e-16 87.4 104 45.2
Psat6g060560 Pisum sativum HOM05D001305 ORTHO05D007147 9.0e-16 87.0 108 43.5
TPR.G1585 Trifolium pratense HOM05D001305 ORTHO05D007147 9.0e-16 87.0 111 43.2
arahy.Tifrunner.gnm1.ann1.D86BWP Arachis hypogaea HOM05D001305 ORTHO05D007147 1.2e-15 86.7 102 44.1
MSTRG.21567 Avicennia marina HOM05D001305 ORTHO05D007147 1.2e-15 86.7 111 41.4
PSO170G3673 Papaver somniferum HOM05D001305 ORTHO05D007147 1.2e-15 86.7 107 43.0
Rhsim01G0275400 Rhododendron simsii HOM05D001305 ORTHO05D007147 1.2e-15 86.7 110 40.0
Thecc.01G281400 Theobroma cacao HOM05D001305 ORTHO05D007147 1.2e-15 86.7 107 43.9
CAN.G242.18 Capsicum annuum HOM05D001305 ORTHO05D007147 2.0e-15 85.9 107 43.9
Duzib133G1205 Durio zibethinus HOM05D001305 ORTHO05D007147 2.6e-15 85.5 100 45.0
Lsat_1_v5_gn_8_56220 Lactuca sativa HOM05D001305 ORTHO05D007147 2.6e-15 85.5 94 45.7
TWI23G1064 Tripterygium wilfordii HOM05D001305 ORTHO05D007147 2.6e-15 85.5 98 44.9
Nitab4.5_0001028g0070 Nicotiana tabacum HOM05D001305 ORTHO05D007147 3.4e-15 85.1 107 43.0
Oeu015964.1 Olea europaea HOM05D001305 ORTHO05D007147 3.4e-15 85.1 103 42.7
Phvul.007G171100 Phaseolus vulgaris HOM05D001305 ORTHO05D007147 3.4e-15 85.1 115 40.0
Solyc09g065020.4 Solanum lycopersicum HOM05D001305 ORTHO05D007147 3.4e-15 85.1 107 43.9
Sopen09g026750 Solanum pennellii HOM05D001305 ORTHO05D007147 3.4e-15 85.1 107 43.9
Atru.chr5.1400 Acer truncatum HOM05D001305 ORTHO05D007147 4.5e-15 84.7 107 43.0
SalBow4G1376 Salvia bowleyana HOM05D001305 ORTHO05D007147 4.5e-15 84.7 111 41.4
CiPaw.08G104500 Carya illinoinensis HOM05D001305 ORTHO05D007147 1.0e-14 83.6 100 42.0
Duzib138G0696 Durio zibethinus HOM05D001305 ORTHO05D007147 1.0e-14 83.6 107 43.9
Gohir.A11G121900 Gossypium hirsutum HOM05D001305 ORTHO05D007147 1.0e-14 83.6 109 43.1
Gohir.D11G127100 Gossypium hirsutum HOM05D001305 ORTHO05D007147 1.0e-14 83.6 109 43.1
Gorai.007G135800 Gossypium raimondii HOM05D001305 ORTHO05D007147 1.0e-14 83.6 109 43.1
Medtr1g072360 Medicago truncatula HOM05D001305 ORTHO05D007147 1.0e-14 83.6 111 42.3
Peaxi162Scf00338g00064 Petunia axillaris HOM05D001305 ORTHO05D007147 1.0e-14 83.6 109 43.1
unitig_749.g13742 Utricularia gibba HOM05D001305 ORTHO05D007147 1.3e-14 83.2 109 43.1
HPP92_011809 Vanilla planifolia HOM05D001305 ORTHO05D007147 1.3e-14 83.2 107 36.4
COL.COLO4_09116 Corchorus olitorius HOM05D001305 ORTHO05D007147 1.7e-14 82.8 100 44.0
Glyma.02G148100 Glycine max HOM05D001305 ORTHO05D007147 1.7e-14 82.8 112 39.3
Sc19g0004440 Simmondsia chinensis HOM05D001305 ORTHO05D007147 1.9e-13 79.3 103 42.7
Glyma.10G025700 Glycine max HOM05D001305 ORTHO05D007147 2.5e-13 79.0 112 40.2
unitig_26.g10153 Utricularia gibba HOM05D001305 ORTHO05D007147 2.5e-13 79.0 107 41.1
THA.LOC104817554 Tarenaya hassleriana HOM05D001305 ORTHO05D007147 1.6e-12 76.3 91 41.8
SEGI_40647 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 4.6e-12 74.7 77 51.9
arahy.Tifrunner.gnm1.ann1.C9YQVF Arachis hypogaea HOM05D001305 ORTHO05D007147 7.9e-12 73.9 108 37.0
arahy.Tifrunner.gnm1.ann1.VP0AEQ Arachis hypogaea HOM05D001305 ORTHO05D007147 7.9e-12 73.9 108 37.0
Mapoly0027s0014 Marchantia polymorpha HOM05D001305 ORTHO05D007147 7.9e-12 73.9 107 37.4
GSVIVG01011119001 Vitis vinifera HOM05D001305 ORTHO05D007147 1.4e-11 73.2 57 56.1
Cc01_g19610 Coffea canephora HOM05D001305 ORTHO05D007147 3.0e-11 72.0 64 51.6
EL10Ac3g06407 Beta vulgaris HOM05D001305 ORTHO05D007147 5.1e-11 71.2 100 41.0
Sabra05G0158400 Salix brachista HOM05D001305 ORTHO05D007147 8.8e-11 70.5 72 45.8
ATR0579G049 Amborella trichopoda HOM05D001305 ORTHO05D007147 1.1e-10 70.1 109 37.6
AUR62038061 Chenopodium quinoa HOM05D001305 ORTHO05D007147 3.3e-10 68.6 100 40.0
AUR62038187 Chenopodium quinoa HOM05D001305 ORTHO05D007147 4.3e-10 68.2 100 41.0
Zm00001eb017340 Zea mays HOM05D001305 ORTHO05D007147 6.3e-09 64.3 52 53.8
CiPaw.11G108800 Carya illinoinensis HOM05D001305 ORTHO05D007147 1.1e-08 63.5 112 32.1
Manes.01G000434 Manihot esculenta HOM05D001305 ORTHO05D007147 6.9e-08 60.8 106 34.0
SEGI_31875 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 6.9e-08 60.8 82 42.7
SEGI_11383 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 1.2e-07 60.1 80 37.5
Dinv32946 Davidia involucrata HOM05D001305 ORTHO05D007147 2.0e-07 59.3 43 58.1
COL.COLO4_10842 Corchorus olitorius HOM05D001305 ORTHO05D007147 2.6e-07 58.9 108 33.3
SEGI_41552 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 2.6e-07 58.9 101 32.7
DCAR_006172 Daucus carota HOM05D001305 ORTHO05D001934 5.9e-07 57.8 104 30.8
Lj2P151T26 Lonicera japonica HOM05D001305 ORTHO05D007147 1.0e-06 57.0 56 46.4
SMO358G0574 Selaginella moellendorffii HOM05D001305 ORTHO05D007147 1.3e-06 56.6 87 37.9
Gohir.D03G088200 Gossypium hirsutum HOM05D001305 ORTHO05D007147 1.7e-06 56.2 97 35.1
Gorai.003G073700 Gossypium raimondii HOM05D001305 ORTHO05D007147 1.7e-06 56.2 97 35.1
Potri.001G452000 Populus trichocarpa HOM05D001305 ORTHO05D007147 2.2e-06 55.8 124 29.8
Thecc.03G216100 Theobroma cacao HOM05D001305 ORTHO05D007147 2.2e-06 55.8 109 33.9
SEGI_33640 Sequoiadendron giganteum HOM05D001305 ORTHO05D007147 5.0e-06 54.7 80 36.2
Dinv21162 Davidia involucrata HOM05D001305 ORTHO05D001934 6.5e-06 54.3 103 34.0
Gohir.A02G095300 Gossypium hirsutum HOM05D001305 ORTHO05D007147 6.5e-06 54.3 97 34.0
MD11G1169600 Malus domestica HOM05D001305 ORTHO05D001934 6.5e-06 54.3 99 29.3
Cc01_g08790 Coffea canephora HOM05D001305 ORTHO05D001934 8.5e-06 53.9 90 33.3


User provided reference genes

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