Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13088 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.0e-207 724.9 367 100.0
SEGI_33369 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.2e-67 261.2 250 60.0
SEGI_21711 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.7e-61 240.7 345 42.3
SEGI_31107 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.7e-61 240.7 345 42.3
SEGI_23434 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.8e-61 239.6 338 42.9
SEGI_23568 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.8e-61 239.6 338 42.9
SEGI_30078 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.8e-61 239.6 318 45.3
SEGI_40661 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 5.6e-60 235.7 345 41.7
SEGI_29917 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 4.7e-59 232.6 314 46.8
SEGI_05727 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 4.0e-58 229.6 347 42.4
SEGI_04365 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 6.0e-54 215.7 321 44.2
SEGI_32879 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 8.6e-53 211.8 311 44.1
SEGI_28836 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.6e-51 206.5 267 44.2
SEGI_12844 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.4e-49 199.9 264 43.6
SEGI_27533 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.4e-49 199.9 341 40.5
SEGI_26499 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.0e-45 188.3 324 40.1
SEGI_09398 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.5e-41 174.5 311 38.9
SEGI_16200 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.2e-38 164.9 360 33.6
SEGI_37891 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 2.2e-24 117.5 252 39.7
SEGI_00912 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.1e-18 98.6 136 44.1
SEGI_22426 Sequoiadendron giganteum HOM05D012667 ORTHO05D011909 3.7e-11 73.6 190 31.1
TAR624G0558 Trochodendron aralioides HOM05D004059 ORTHO05D004591 1.1e-10 72.0 192 31.2
Ciclev10007937m.g Citrus clementina HOM05D004059 ORTHO05D004591 5.3e-10 69.7 195 30.8
Actinidia29906 Actinidia chinensis HOM05D004059 ORTHO05D004591 2.6e-09 67.4 188 31.4
Dinv36776 Davidia involucrata HOM05D004059 ORTHO05D004591 2.6e-09 67.4 193 31.6
GSVIVG01015189001 Vitis vinifera HOM05D004059 ORTHO05D004591 2.6e-09 67.4 192 29.7
SEGI_08279 Sequoiadendron giganteum HOM05D012667 ORTHO05D011909 4.5e-09 66.6 259 30.5
Actinidia38451 Actinidia chinensis HOM05D004059 ORTHO05D004591 5.8e-09 66.2 192 30.2
Nn8g38830 Nelumbo nucifera HOM05D004059 ORTHO05D004591 5.8e-09 66.2 185 30.8
TWI34G0199 Tripterygium wilfordii HOM05D004059 ORTHO05D004591 1.7e-08 64.7 210 29.0
MBI01_g09949_MAGBIO Magnolia biondii HOM05D004059 ORTHO05D004591 2.2e-08 64.3 204 31.4
Duzib168G0233 Durio zibethinus HOM05D004059 ORTHO05D004591 2.9e-08 63.9 195 30.8
Nn6g35501 Nelumbo nucifera HOM05D004059 ORTHO05D004591 2.9e-08 63.9 272 25.7
Gohir.D07G011700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 3.8e-08 63.5 203 30.0
Lj4C294T9 Lonicera japonica HOM05D004059 ORTHO05D004591 4.9e-08 63.2 212 26.4
Duzib187G0197 Durio zibethinus HOM05D004059 ORTHO05D004591 6.4e-08 62.8 189 30.2
Hma1.2p1_1838F.1_g304870 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 6.4e-08 62.8 187 29.4
SEGI_04638 Sequoiadendron giganteum HOM05D012667 ORTHO05D011909 6.4e-08 62.8 182 33.0
Gorai.001G012400 Gossypium raimondii HOM05D004059 ORTHO05D004591 8.4e-08 62.4 203 29.6
Migut.J00583 Erythranthe guttata HOM05D004059 ORTHO05D004591 1.1e-07 62.0 196 32.7
Gohir.A07G011900 Gossypium hirsutum HOM05D004059 ORTHO05D004591 1.1e-07 62.0 203 30.0
MD02G1081600 Malus domestica HOM05D004059 ORTHO05D004591 1.1e-07 62.0 191 29.8
MD15G1208900 Malus domestica HOM05D004059 ORTHO05D004591 1.4e-07 61.6 198 29.3
Lsat_1_v5_gn_7_36701 Lactuca sativa HOM05D004059 ORTHO05D004591 1.9e-07 61.2 294 25.5
Lj7A677T52 Lonicera japonica HOM05D004059 ORTHO05D004591 1.9e-07 61.2 172 30.2
Lj3g0024272 Lotus japonicus HOM05D000670 ORTHO05D000529 1.9e-07 61.2 167 29.9
SEGI_24108 Sequoiadendron giganteum HOM05D020534 ORTHO05D023143 1.9e-07 61.2 123 32.5
HPP92_023832 Vanilla planifolia HOM05D004059 ORTHO05D004591 1.9e-07 61.2 173 27.2
Cfa003070 Carpinus fangiana HOM05D004059 ORTHO05D004591 2.4e-07 60.8 187 28.9
TAR636G3314 Trochodendron aralioides HOM05D004059 ORTHO05D004591 2.4e-07 60.8 188 28.2
Lj4C294G8 Lonicera japonica HOM05D004059 ORTHO05D004591 4.2e-07 60.1 212 27.8
PGSC0003DMG400022043 Solanum tuberosum HOM05D004059 ORTHO05D004591 4.2e-07 60.1 186 30.6
HPP92_023889 Vanilla planifolia HOM05D004059 ORTHO05D004591 4.2e-07 60.1 173 27.2
QL02p062365 Quercus lobata HOM05D004059 ORTHO05D004591 5.5e-07 59.7 305 26.2
Sopen07g018910 Solanum pennellii HOM05D004059 ORTHO05D004591 5.5e-07 59.7 187 29.4
Solyc07g039570.3 Solanum lycopersicum HOM05D004059 ORTHO05D004591 7.1e-07 59.3 187 28.9
AUR62029052 Chenopodium quinoa HOM05D004059 ORTHO05D004591 1.2e-06 58.5 203 28.6
HanXRQChr03g0060341 Helianthus annuus HOM05D004059 ORTHO05D004591 2.1e-06 57.8 235 25.1
Mapoly0028s0062 Marchantia polymorpha HOM05D024145 ORTHO05D022909 2.1e-06 57.8 83 41.0
CsaV3_1G040580 Cucumis sativus L. HOM05D004059 ORTHO05D004591 2.7e-06 57.4 196 27.0
Dinv42329 Davidia involucrata HOM05D004059 ORTHO05D004591 2.7e-06 57.4 73 45.2
Potri.006G148800 Populus trichocarpa HOM05D004059 ORTHO05D004591 2.7e-06 57.4 195 26.2
Sabra06G0117700 Salix brachista HOM05D004059 ORTHO05D004591 2.7e-06 57.4 195 26.2
Gohir.D05G031700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 3.5e-06 57.0 188 26.6
Lalb_Chr11g0074551 Lupinus albus HOM05D004059 ORTHO05D004591 3.5e-06 57.0 192 27.1
SGA_v2.0_scaffold62G21623 Striga asiatica HOM05D004059 ORTHO05D004591 3.5e-06 57.0 208 30.3
CAN.G1583.1 Capsicum annuum HOM05D000597 ORTHO05D004591 4.6e-06 56.6 190 29.5
DCAR_031333 Daucus carota HOM05D004059 ORTHO05D004591 4.6e-06 56.6 171 33.3
Eucgr.C03476 Eucalyptus grandis HOM05D004059 ORTHO05D004591 4.6e-06 56.6 189 27.5
Sed0008144 Sechium edule HOM05D004059 ORTHO05D004591 4.6e-06 56.6 195 26.2
SEGI_08833 Sequoiadendron giganteum HOM05D012667 ORTHO05D023143 4.6e-06 56.6 146 35.6
Zm00001eb160210 Zea mays HOM05D004059 ORTHO05D004591 4.6e-06 56.6 175 30.3
ClCG03G015470 Citrullus lanatus HOM05D004059 ORTHO05D004591 6.0e-06 56.2 200 27.0
Haze_25925 Corylus avellana HOM05D004059 ORTHO05D004591 6.0e-06 56.2 188 28.7
Gohir.A05G030300 Gossypium hirsutum HOM05D004059 ORTHO05D004591 6.0e-06 56.2 188 26.1
Gorai.009G031900 Gossypium raimondii HOM05D004059 ORTHO05D004591 6.0e-06 56.2 188 26.6
Prupe.7G207500 Prunus persica HOM05D004059 ORTHO05D004591 6.0e-06 56.2 194 27.3
SEGI_08380 Sequoiadendron giganteum HOM05D000016 ORTHO05D050986 6.0e-06 56.2 134 29.9
CiPaw.03G214200 Carya illinoinensis HOM05D004059 ORTHO05D004591 7.9e-06 55.8 263 23.6
MELO3C004627.2 Cucumis melo HOM05D004059 ORTHO05D004591 7.9e-06 55.8 198 27.8
Hund25946 Selenicereus undatus HOM05D004059 ORTHO05D004591 7.9e-06 55.8 204 27.5
TWI15G0365 Tripterygium wilfordii HOM05D001604 ORTHO05D001432 7.9e-06 55.8 175 30.9


User provided reference genes

Program Settings