Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11437 Sequoiadendron giganteum HOM05D016243 ORTHO05D037592 3.7e-51 204.5 100 100.0
SEGI_23193 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.8e-29 132.5 102 62.7
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.5e-20 102.8 66 72.7
SEGI_01629 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.5e-20 101.3 104 51.0
SEGI_31406 Sequoiadendron giganteum HOM05D016243 ORTHO05D037592 2.4e-18 95.5 75 61.3
SEGI_14648 Sequoiadendron giganteum HOM05D000154 ORTHO05D000092 4.6e-17 91.3 78 56.4
SEGI_33589 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.3e-15 85.1 103 43.7
SEGI_41329 Sequoiadendron giganteum HOM05D017181 ORTHO05D000001 4.3e-15 84.7 100 43.0
SEGI_25989 Sequoiadendron giganteum HOM05D016243 ORTHO05D016504 3.7e-14 81.6 102 46.1
SEGI_12303 Sequoiadendron giganteum HOM05D016243 ORTHO05D037592 1.8e-13 79.3 90 50.0
SEGI_41176 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.8e-13 79.3 90 50.0
SEGI_32299 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.5e-12 74.7 103 37.9
SEGI_17650 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.9e-11 72.0 102 39.2
SEGI_15912 Sequoiadendron giganteum HOM05D016243 ORTHO05D387164 3.8e-11 71.6 101 41.6
SEGI_21366 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 8.4e-11 70.5 101 38.6
SEGI_07381 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.9e-10 69.3 101 38.6
SEGI_10584 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.9e-10 69.3 90 42.2
SEGI_26607 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.5e-10 68.9 65 50.8
SEGI_16860 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.2e-10 68.2 100 36.0
SEGI_16217 Sequoiadendron giganteum HOM05D001025 ORTHO05D000837 1.2e-09 66.6 87 44.8
SEGI_32089 Sequoiadendron giganteum HOM05D003650 ORTHO05D004213 2.1e-09 65.9 90 42.2
SEGI_36948 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.1e-09 65.9 102 38.2
THA.LOC104820084 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.6e-09 64.7 100 33.0
Ah.16g108360 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.0e-09 64.3 100 36.0
FvH4_7g33702 Fragaria vesca HOM05D000002 ORTHO05D000001 2.3e-08 62.4 100 36.0
MD15G1383000 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-08 62.4 100 39.0
SEGI_12455 Sequoiadendron giganteum HOM05D011033 ORTHO05D015595 2.3e-08 62.4 102 35.3
ECA246G4026 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.9e-08 61.6 100 34.0
MD09G1238700 Malus domestica HOM05D000002 ORTHO05D000001 6.7e-08 60.8 103 40.8
AagrBONN_evm.TU.Sc2ySwM_117.3637 Anthoceros agrestis HOM05D000002 ORTHO05D000001 8.7e-08 60.5 99 31.3
SHI27900 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 60.1 102 34.3
SHI37367 Sapria himalayana HOM05D000002 ORTHO05D000080 1.1e-07 60.1 102 34.3
SEGI_09840 Sequoiadendron giganteum HOM05D000006 ORTHO05D000001 1.1e-07 60.1 100 38.0
SHI47831 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 102 34.3
SHI48104 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 102 34.3
ECA236G1271 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-07 59.3 100 31.0
ECA238G4552 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-07 59.3 100 31.0
ECA240G2365 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-07 59.3 100 31.0
Sopen11g010290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.3 100 36.0
ECA236G3628 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.5e-07 58.9 100 33.0
ECA238G0688 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.5e-07 58.9 100 33.0
ECA246G0313 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.5e-07 58.9 100 32.0
ECA247G0454 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.5e-07 58.9 100 33.0
ECA248G1325 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-07 58.9 100 31.0
SHI06421 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 58.9 102 33.3
SHI26279 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 58.9 102 34.3
ECA236G2939 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.3e-07 58.5 100 33.0
ECA238G1756 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.3e-07 58.5 106 34.0
SHI22731 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 58.5 102 32.4
SEGI_20537 Sequoiadendron giganteum HOM05D011033 ORTHO05D015595 3.3e-07 58.5 102 34.3
ECA247G2426 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.3e-07 58.2 100 33.0
ECA247G2576 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.3e-07 58.2 100 33.0
MD10G1011700 Malus domestica HOM05D000002 ORTHO05D000001 4.3e-07 58.2 103 35.9
SHI07801 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-07 58.2 102 33.3
SHI16764 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-07 58.2 102 34.3
SEGI_09239 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.3e-07 58.2 100 38.0
SEGI_15004 Sequoiadendron giganteum HOM05D001035 ORTHO05D001045 4.3e-07 58.2 102 35.3
SEGI_19682 Sequoiadendron giganteum HOM05D000422 ORTHO05D002369 4.3e-07 58.2 96 37.5
SEGI_32327 Sequoiadendron giganteum HOM05D001060 ORTHO05D000905 4.3e-07 58.2 55 49.1
ECA234G0200 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.7e-07 57.8 100 33.0
ECA240G3532 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.7e-07 57.8 100 32.0
ECA247G3355 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.7e-07 57.8 100 33.0
SHI06982 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-07 57.8 102 33.3
SHI21657 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-07 57.8 102 33.3
SHI46254 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-07 57.8 102 34.3
SEGI_05802 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 5.7e-07 57.8 81 39.5
TPR.G40379 Trifolium pratense HOM05D000006 ORTHO05D000001 5.7e-07 57.8 98 31.6
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-07 57.4 100 34.0
ECA232G2937 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.4e-07 57.4 100 31.0
ECA234G3375 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.4e-07 57.4 99 30.3
ECA240G3473 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.4e-07 57.4 98 33.7
HanXRQChr02g0038571 Helianthus annuus HOM05D000002 ORTHO05D000001 7.4e-07 57.4 99 32.3
SHI05160 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-07 57.4 102 32.4
SHI39008 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-07 57.4 102 33.3
SHI39153 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-07 57.4 102 33.3
AUR62016370 Chenopodium quinoa HOM05D000002 ORTHO05D000001 9.6e-07 57.0 101 37.6
ECA234G2468 Erigeron canadensis HOM05D000006 ORTHO05D000001 9.6e-07 57.0 100 32.0
ECA238G3796 Erigeron canadensis HOM05D000006 ORTHO05D000001 9.6e-07 57.0 100 32.0
ECA247G1168 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-07 57.0 100 31.0
SHI10121 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-07 57.0 102 32.4
THA.LOC104818552 Tarenaya hassleriana HOM05D000006 ORTHO05D000001 9.6e-07 57.0 98 34.7
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 56.6 100 36.0
CSS0032052 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 56.6 100 36.0
AUR62026137 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.3e-06 56.6 101 35.6
AUR62039358 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.3e-06 56.6 101 37.6
AUR62044539 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.3e-06 56.6 101 37.6
AUR62044733 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.3e-06 56.6 101 37.6
ECA236G3709 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.3e-06 56.6 100 32.0
ECA238G3979 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.3e-06 56.6 100 31.0
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-06 56.6 100 33.0
SHI02687 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 102 32.4
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 100 31.0
SHI45012 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 100 31.0
AUR62027937 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.6e-06 56.2 101 37.6
ECA232G4062 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-06 56.2 100 31.0
ECA246G1603 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-06 56.2 100 31.0
MD11G1074500 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-06 56.2 100 32.0
QL09p045312 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-06 56.2 101 34.7
SHI00860 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 56.2 101 32.7
AUR62035398 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.1e-06 55.8 101 37.6
ECA183G0001 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.1e-06 55.8 100 31.0
ECA240G4673 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.1e-06 55.8 100 31.0
ECA247G1257 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.1e-06 55.8 100 31.0
ECA247G2208 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-06 55.8 100 30.0
HanXRQChr03g0090001 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-06 55.8 100 30.0
SHI07391 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 102 33.3
SHI24209 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 101 31.7
EL10Ac8g19700 Beta vulgaris HOM05D000002 ORTHO05D000001 2.8e-06 55.5 101 36.6
CANSAT01G2627 Cannabis sativa HOM05D000002 ORTHO05D000001 2.8e-06 55.5 100 33.0
ECA238G2358 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.8e-06 55.5 100 31.0
ECA246G4098 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-06 55.5 100 33.0
SHI12349 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.5 102 32.4
SHI21288 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.5 102 33.3
SHI43248 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.5 100 30.0
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-06 55.1 100 35.0
AUR62027543 Chenopodium quinoa HOM05D000018 ORTHO05D000001 3.7e-06 55.1 101 36.6
ECA233G0860 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.7e-06 55.1 100 31.0
QL03p042293 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-06 55.1 101 33.7
QL04p083744 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-06 55.1 101 33.7
SHI18782 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 55.1 102 33.3
SEGI_37119 Sequoiadendron giganteum HOM05D000015 ORTHO05D004138 3.7e-06 55.1 67 41.8
ECA216G0001 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.8e-06 54.7 98 31.6
ECA232G3213 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.8e-06 54.7 100 31.0
ECA232G4160 Erigeron canadensis HOM05D000006 ORTHO05D000091 4.8e-06 54.7 98 31.6
ECA248G3790 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.8e-06 54.7 105 36.2
Hma1.2p1_0542F.1_g175110 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.8e-06 54.7 100 34.0
MD10G1162100 Malus domestica HOM05D000002 ORTHO05D000001 4.8e-06 54.7 100 33.0
Pp3c10_25320 Physcomitrium patens HOM05D000002 ORTHO05D000001 4.8e-06 54.7 106 31.1
SHI07537 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-06 54.7 101 34.7
SHI21640 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-06 54.7 102 32.4
SEGI_19750 Sequoiadendron giganteum HOM05D003272 ORTHO05D003776 4.8e-06 54.7 73 42.5
SEGI_22435 Sequoiadendron giganteum HOM05D011033 ORTHO05D015595 4.8e-06 54.7 79 39.2
ECA233G2310 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.2e-06 54.3 105 36.2
ECA233G4290 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.2e-06 54.3 100 30.0
ECA238G2989 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.2e-06 54.3 105 37.1
ECA240G3137 Erigeron canadensis HOM05D000014 ORTHO05D000001 6.2e-06 54.3 101 32.7
ECA247G2454 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.2e-06 54.3 100 31.0
ECA248G0044 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.2e-06 54.3 101 31.7
ECA248G0206 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-06 54.3 100 29.0
FvH4_2g16312 Fragaria vesca HOM05D000002 ORTHO05D000001 6.2e-06 54.3 107 33.6
FvH4_7g32173 Fragaria vesca HOM05D000002 ORTHO05D000001 6.2e-06 54.3 100 31.0
SHI03363 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 100 31.0
SHI05308 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 100 31.0
SHI28096 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 102 30.4
Sopen04g023400 Solanum pennellii HOM05D000002 ORTHO05D000001 6.2e-06 54.3 100 33.0
AagrBONN_evm.TU.Sc2ySwM_368.2232 Anthoceros agrestis HOM05D012049 ORTHO05D014002 8.2e-06 53.9 99 30.3
Ca_05908_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.2e-06 53.9 100 33.0
ECA232G0811 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.2e-06 53.9 100 31.0
ECA236G2964 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.2e-06 53.9 100 31.0
ECA240G2409 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.2e-06 53.9 100 30.0
ECA246G0243 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-06 53.9 100 28.0
ECA248G0345 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.2e-06 53.9 105 36.2
SHI25733 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-06 53.9 101 33.7
SEGI_35196 Sequoiadendron giganteum HOM05D000938 ORTHO05D001451 8.2e-06 53.9 53 49.1
SEGI_37760 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 8.2e-06 53.9 107 30.8


User provided reference genes

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