Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03033 Sequoiadendron giganteum HOM05D000533 ORTHO05D002807 2.5e-121 438.7 212 100.0
SEGI_40319 Sequoiadendron giganteum HOM05D000533 ORTHO05D002807 1.0e-61 240.7 151 83.4
SEGI_30332 Sequoiadendron giganteum HOM05D000533 ORTHO05D002807 2.3e-34 149.8 87 90.8
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 1.6e-30 137.1 116 67.2
Hma1.2p1_1191F.1_g265460 Hydrangea macrophylla HOM05D000533 ORTHO05D002807 1.0e-29 134.4 87 81.6
HanXRQChr08g0236071 Helianthus annuus HOM05D000533 ORTHO05D002807 2.9e-29 132.9 87 81.6
HanXRQMTg0579311 Helianthus annuus HOM05D000533 ORTHO05D002807 2.9e-29 132.9 87 81.6
Ca_03778_v3 Cicer arietinum L. HOM05D008696 ORTHO05D002807 3.8e-29 132.5 96 72.9
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 3.8e-29 132.5 96 72.9
ATMG01275 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 5.0e-29 132.1 87 80.5
CAN.G1673.5 Capsicum annuum HOM05D000533 ORTHO05D002807 5.0e-29 132.1 87 80.5
Solyc00g094530.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 5.0e-29 132.1 87 80.5
Nitab4.5_0011987g0010 Nicotiana tabacum HOM05D000533 ORTHO05D002807 8.5e-29 131.3 136 56.6
SabraMtG0003500 Salix brachista HOM05D000533 ORTHO05D002807 1.1e-28 131.0 90 76.7
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 1.1e-28 131.0 91 78.0
CDE02G0273 Ceratophyllum demersum HOM05D000533 ORTHO05D002807 3.2e-28 129.4 80 86.2
SGA_v2.0_scaffold255G45330 Striga asiatica HOM05D008696 ORTHO05D002807 3.2e-28 129.4 90 77.8
Psat0s3560g0080 Pisum sativum HOM05D000533 ORTHO05D002807 4.2e-28 129.0 87 79.3
SHI52701 Sapria himalayana HOM05D000533 ORTHO05D002807 4.2e-28 129.0 87 79.3
TPR.G74 Trifolium pratense HOM05D000533 ORTHO05D002807 4.2e-28 129.0 87 79.3
unitig_87.g27987 Utricularia gibba HOM05D000533 ORTHO05D002807 4.2e-28 129.0 87 79.3
SHI35933 Sapria himalayana HOM05D000533 ORTHO05D002807 5.5e-28 128.6 87 79.3
CAN.G1.14 Capsicum annuum HOM05D000533 ORTHO05D002807 7.2e-28 128.3 87 79.3
Nitab4.5_0004300g0140 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.6e-27 127.1 87 78.2
SHI46653 Sapria himalayana HOM05D000533 ORTHO05D002807 2.7e-27 126.3 87 78.2
Gorai.001G164200 Gossypium raimondii HOM05D000533 ORTHO05D002807 3.6e-27 125.9 87 78.2
SHI50269 Sapria himalayana HOM05D000533 ORTHO05D002807 4.7e-27 125.6 87 75.9
Sc12g0004050 Simmondsia chinensis HOM05D000533 ORTHO05D002807 8.0e-27 124.8 79 83.5
BNapus_Darmor_BZH_scaffold_234p00330 Brassica napus HOM05D000533 ORTHO05D002807 2.3e-26 123.2 108 63.9
BolSC28t60336H Brassica oleracea HOM05D000533 ORTHO05D002807 2.3e-26 123.2 108 63.9
BolSC28t60400H Brassica oleracea HOM05D000533 ORTHO05D002807 2.3e-26 123.2 108 63.9
BraSC159t45722Z Brassica rapa HOM05D000533 ORTHO05D002807 2.3e-26 123.2 108 63.9
SalBow1G1296 Salvia bowleyana HOM05D000533 ORTHO05D002807 3.0e-26 122.9 78 83.3
SalBow1G1594 Salvia bowleyana HOM05D000533 ORTHO05D002807 3.0e-26 122.9 78 83.3
Nitab4.5_0004100g0100 Nicotiana tabacum HOM05D000533 ORTHO05D002807 4.0e-26 122.5 130 55.4
Lj5g0015581 Lotus japonicus HOM05D000533 ORTHO05D002807 5.2e-26 122.1 99 67.7
COL.COLO4_04416 Corchorus olitorius HOM05D000533 ORTHO05D002807 1.2e-25 120.9 79 81.0
Nitab4.5_0000338g0180 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.5e-25 120.6 87 73.6
Gorai.013G212700 Gossypium raimondii HOM05D000533 ORTHO05D002807 2.0e-25 120.2 90 72.2
BraSC77t46641Z Brassica rapa HOM05D000533 ORTHO05D002807 2.6e-25 119.8 106 63.2
Nitab4.5_0000031g0220 Nicotiana tabacum HOM05D000533 ORTHO05D002807 3.4e-25 119.4 130 54.6
BraSC48t46261Z Brassica rapa HOM05D000533 ORTHO05D002807 1.3e-24 117.5 108 63.0
Nn1g09945 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.3e-24 117.5 76 80.3
Nn1g10033 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.3e-24 117.5 76 80.3
Nn1g10034 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.3e-24 117.5 76 80.3
Nn1g10159 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.3e-24 117.5 76 80.3
Nn1g10187 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.3e-24 117.5 76 80.3
PGR028G0008 Punica granatum HOM05D000533 ORTHO05D002807 1.3e-24 117.5 76 80.3
GSVIVG01006663001 Vitis vinifera HOM05D000533 ORTHO05D002807 1.3e-24 117.5 76 80.3
AT2G07785 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 6.3e-24 115.2 76 78.9
CARHR287220 Cardamine hirsuta HOM05D000533 ORTHO05D002807 6.3e-24 115.2 76 78.9
CiPaw.16G068400 Carya illinoinensis HOM05D000533 ORTHO05D002807 6.3e-24 115.2 76 78.9
Sp3g25800 Schrenkiella parvula HOM05D000533 ORTHO05D002807 6.3e-24 115.2 76 78.9
Sed0014600 Sechium edule HOM05D000533 ORTHO05D002807 1.1e-23 114.4 76 77.6
LjContig00315g0001623 Lotus japonicus HOM05D008696 ORTHO05D002807 1.4e-23 114.0 98 67.3
Lalb_Chr00c21g0405731 Lupinus albus HOM05D000533 ORTHO05D002807 5.4e-23 112.1 76 77.6
Lalb_Chr00c24g0407091 Lupinus albus HOM05D000533 ORTHO05D002807 5.4e-23 112.1 76 77.6
Nitab4.5_0008578g0070 Nicotiana tabacum HOM05D008696 ORTHO05D002807 1.2e-22 110.9 104 62.5
RcHm_v2.0_Chr6g0256751 Rosa chinensis HOM05D000533 ORTHO05D002807 1.2e-22 110.9 76 76.3
RcHm_v2.0_MTg0498831 Rosa chinensis HOM05D000533 ORTHO05D002807 1.2e-22 110.9 76 76.3
SHI26814 Sapria himalayana HOM05D000533 ORTHO05D002807 2.7e-22 109.8 76 73.7
Nitab4.5_0000172g1370 Nicotiana tabacum HOM05D000533 ORTHO05D002807 4.5e-22 109.0 119 52.9
Nitab4.5_0000307g0290 Nicotiana tabacum HOM05D000533 ORTHO05D002807 4.5e-22 109.0 130 52.3
BraSC77t46669Z Brassica rapa HOM05D000533 ORTHO05D002807 5.9e-22 108.6 78 75.6
Nitab4.5_0002325g0100 Nicotiana tabacum HOM05D000533 ORTHO05D002807 7.7e-22 108.2 111 60.4
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 1.0e-21 107.8 92 63.0
Nitab4.5_0001796g0260 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.3e-21 107.5 87 66.7
PSO541G4958 Papaver somniferum HOM05D000533 ORTHO05D002807 1.7e-21 107.1 76 71.1
SHI42029 Sapria himalayana HOM05D000533 ORTHO05D002807 1.9e-20 103.6 76 73.7
Nitab4.5_0000686g0160 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.2e-19 100.9 71 76.1
Nitab4.5_0000172g0730 Nicotiana tabacum HOM05D000533 ORTHO05D002807 2.1e-19 100.1 119 50.4
PSO063G0118 Papaver somniferum HOM05D000533 ORTHO05D002807 1.4e-18 97.4 70 72.9
arahy.Tifrunner.gnm1.ann1.P3P6H5 Arachis hypogaea HOM05D009044 ORTHO05D002807 4.0e-18 95.9 68 73.5
Solyc05g023920.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.7e-16 90.5 76 63.2
ClCG09G011440 Citrullus lanatus HOM05D000533 ORTHO05D002807 5.9e-14 82.0 66 69.7
Peaxi162Scf01556g00006 Petunia axillaris HOM05D000533 ORTHO05D002807 5.9e-14 82.0 49 83.7
Pp3c11_850 Physcomitrium patens HOM05D000533 ORTHO05D002807 1.7e-13 80.5 63 69.8
Nitab4.5_0000844g0030 Nicotiana tabacum HOM05D000533 ORTHO05D002807 8.6e-13 78.2 97 52.6
SHI37745 Sapria himalayana HOM05D000533 ORTHO05D002807 4.3e-12 75.9 130 43.1
SHI34935 Sapria himalayana HOM05D000533 ORTHO05D002807 9.5e-12 74.7 95 51.6
Lalb_Chr07g0184511 Lupinus albus HOM05D000533 ORTHO05D002807 2.8e-11 73.2 51 76.5
Nitab4.5_0004100g0050 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.2e-09 67.8 82 52.4
Nitab4.5_0000886g0240 Nicotiana tabacum HOM05D008696 ORTHO05D010514 2.0e-09 67.0 117 41.9
Gohir.D04G096532 Gossypium hirsutum HOM05D000533 ORTHO05D002807 5.7e-09 65.5 35 91.4
SHI55136 Sapria himalayana HOM05D000533 ORTHO05D002807 5.7e-09 65.5 43 79.1
Peaxi162Scf00489g00025 Petunia axillaris HOM05D008696 ORTHO05D002807 7.5e-09 65.1 76 51.3
THA.LOC104820711 Tarenaya hassleriana HOM05D000533 ORTHO05D002807 9.8e-09 64.7 82 43.9
Psat1g104960 Pisum sativum HOM05D000533 ORTHO05D002807 1.3e-08 64.3 99 38.4
Nitab4.5_0000844g0040 Nicotiana tabacum HOM05D000533 ORTHO05D002807 2.2e-08 63.5 93 46.2
SHI37562 Sapria himalayana HOM05D008696 ORTHO05D010514 2.2e-08 63.5 35 91.4
Nitab4.5_0001607g0120 Nicotiana tabacum HOM05D000533 ORTHO05D002807 2.9e-08 63.2 56 64.3
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 1.1e-07 61.2 91 37.4
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 1.1e-07 61.2 91 37.4
Psat4g172360 Pisum sativum HOM05D000533 ORTHO05D002807 1.1e-07 61.2 91 38.5
Psat0s1160g0400 Pisum sativum HOM05D000533 ORTHO05D002807 1.4e-07 60.8 91 38.5
Psat0s6989g0240 Pisum sativum HOM05D000533 ORTHO05D001069 1.4e-07 60.8 91 38.5
Psat1g050080 Pisum sativum HOM05D000533 ORTHO05D001069 1.4e-07 60.8 91 38.5
Psat3g095040 Pisum sativum HOM05D000533 ORTHO05D001069 1.4e-07 60.8 91 38.5
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 1.4e-07 60.8 91 38.5
COL.COLO4_02137 Corchorus olitorius HOM05D000533 ORTHO05D002807 2.4e-07 60.1 73 46.6
Psat0s411g0120 Pisum sativum HOM05D000533 ORTHO05D002807 2.4e-07 60.1 87 37.9
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 3.2e-07 59.7 91 37.4
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 3.2e-07 59.7 91 37.4
Medtr3g113820 Medicago truncatula HOM05D000533 ORTHO05D002807 3.2e-07 59.7 83 37.3
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 4.1e-07 59.3 83 39.8
Psat0s1586g0320 Pisum sativum HOM05D000533 ORTHO05D002807 4.1e-07 59.3 86 38.4
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 4.1e-07 59.3 83 37.3
SabraPtG0005900 Salix brachista HOM05D000533 ORTHO05D001069 4.1e-07 59.3 83 37.3
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 5.4e-07 58.9 91 36.3
arahy.Tifrunner.gnm1.ann1.1262SD Arachis hypogaea HOM05D000533 ORTHO05D002807 7.0e-07 58.5 91 36.3
arahy.Tifrunner.gnm1.ann1.510BCU Arachis hypogaea HOM05D000533 ORTHO05D002807 7.0e-07 58.5 91 36.3
vmacro22393 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 7.0e-07 58.5 83 37.3
vmacro22419 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 7.0e-07 58.5 83 37.3
Lj2C1238G35 Lonicera japonica HOM05D000533 ORTHO05D001069 9.2e-07 58.2 83 37.3
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 9.2e-07 58.2 83 37.3
CAN.G579.3 Capsicum annuum HOM05D000533 ORTHO05D002807 1.2e-06 57.8 38 71.1
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 2.0e-06 57.0 83 36.1
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 2.0e-06 57.0 83 37.3
ATR0043G018 Amborella trichopoda HOM05D000533 ORTHO05D001069 2.7e-06 56.6 83 36.1
SEGI_20811 Sequoiadendron giganteum HOM05D000533 ORTHO05D002807 2.7e-06 56.6 83 38.6
Gohir.D11G334151 Gossypium hirsutum HOM05D000533 ORTHO05D001069 3.5e-06 56.2 83 36.1
arahy.Tifrunner.gnm1.ann1.840LER Arachis hypogaea HOM05D000533 ORTHO05D002807 4.6e-06 55.8 91 35.2
C02p28820 Brassica napus HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
C05p53830 Brassica napus HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
BolC2t08927H Brassica oleracea HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
BraSC25t45913Z Brassica rapa HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
BraSC59t46529Z Brassica rapa HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
FAN01G2990 Fragaria x ananassa HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 38.6
Gohir.1Z049694 Gossypium hirsutum HOM05D000533 ORTHO05D001069 4.6e-06 55.8 83 36.1
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 4.6e-06 55.8 76 36.8
Hma1.2p1_0660F.1_g197440 Hydrangea macrophylla HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
Hma1.2p1_2753F.1_g327925 Hydrangea macrophylla HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
Medtr0002s0150 Medicago truncatula HOM05D000533 ORTHO05D001069 4.6e-06 55.8 83 37.3
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 4.6e-06 55.8 83 36.1
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 4.6e-06 55.8 80 37.5
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 5.9e-06 55.5 83 36.1
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 5.9e-06 55.5 83 36.1
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 5.9e-06 55.5 83 36.1
Gohir.A01G139542 Gossypium hirsutum HOM05D000533 ORTHO05D002807 5.9e-06 55.5 79 36.7
Ah.10g027260 Amaranthus hybridus HOM05D000533 ORTHO05D001069 7.8e-06 55.1 89 34.8
Ah.10g027700 Amaranthus hybridus HOM05D000533 ORTHO05D001069 7.8e-06 55.1 89 34.8
MELO3C027055.2 Cucumis melo HOM05D000533 ORTHO05D002807 7.8e-06 55.1 83 36.1
Migut.D01248 Erythranthe guttata HOM05D000533 ORTHO05D001069 7.8e-06 55.1 83 34.9
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 7.8e-06 55.1 83 36.1
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 7.8e-06 55.1 83 36.1
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 7.8e-06 55.1 83 36.1
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 7.8e-06 55.1 83 36.1
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 7.8e-06 55.1 83 36.1
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 7.8e-06 55.1 83 36.1
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 7.8e-06 55.1 83 36.1
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 7.8e-06 55.1 83 36.1
Nn064s42206 Nelumbo nucifera HOM05D000533 ORTHO05D002807 7.8e-06 55.1 83 36.1


User provided reference genes

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