Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.4e-182 641.3 367 100.0
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.8e-55 220.7 195 57.4
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 3.2e-55 219.9 195 57.9
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 1.6e-54 217.6 197 58.4
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 2.7e-54 216.9 195 56.4
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 2.7e-54 216.9 195 59.0
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 4.6e-54 216.1 198 55.1
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.3e-53 213.8 197 56.3
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 3.0e-53 213.4 195 57.4
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 3.9e-53 213.0 193 57.0
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 8.6e-53 211.8 202 57.4
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 8.6e-53 211.8 195 56.4
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 4.3e-52 209.5 195 55.4
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 5.6e-52 209.1 197 55.3
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 5.6e-52 209.1 197 55.8
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 7.3e-52 208.8 195 55.4
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 1.6e-51 207.6 195 55.9
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.1e-51 207.2 195 55.9
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.8e-51 206.8 196 56.6
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 3.6e-51 206.5 195 55.9
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 6.2e-51 205.7 193 54.9
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 6.2e-51 205.7 197 57.4
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 6.2e-51 205.7 195 55.4
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.0e-51 205.3 197 54.8
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 1.1e-50 204.9 195 53.8
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 1.1e-50 204.9 197 54.3
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.4e-50 204.5 197 54.8
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.8e-50 204.1 195 55.4
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.8e-50 204.1 195 53.3
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 1.8e-50 204.1 195 54.9
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 3.1e-50 203.4 197 52.3
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 5.2e-50 202.6 194 56.2
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 5.2e-50 202.6 195 54.9
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 6.8e-50 202.2 195 52.8
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 6.8e-50 202.2 194 55.2
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 6.8e-50 202.2 197 54.8
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 8.9e-50 201.8 197 55.3
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 1.2e-49 201.4 194 55.2
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 1.5e-49 201.1 195 54.9
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 3.4e-49 199.9 199 55.8
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 4.4e-49 199.5 194 55.7
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 5.8e-49 199.1 194 54.6
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 5.8e-49 199.1 195 52.8
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 5.8e-49 199.1 195 54.9
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 7.5e-49 198.7 193 51.3
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 9.8e-49 198.4 194 53.6
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 9.8e-49 198.4 198 55.1
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 2.2e-48 197.2 195 53.3
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 3.7e-48 196.4 194 51.5
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 6.4e-48 195.7 193 52.8
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 8.3e-48 195.3 195 54.9
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 8.3e-48 195.3 197 52.3
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.1e-47 194.9 193 50.3
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.4e-47 194.5 197 52.3
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 1.4e-47 194.5 195 52.8
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 1.4e-47 194.5 194 54.1
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.4e-47 193.7 194 53.6
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 2.4e-47 193.7 195 52.8
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.2e-47 193.4 197 51.8
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 7.0e-47 192.2 199 52.8
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 2.0e-46 190.7 196 52.6
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 2.0e-46 190.7 196 52.6
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 2.0e-46 190.7 196 52.6
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 4.6e-46 189.5 195 51.8
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 7.8e-46 188.7 196 51.5
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.0e-45 188.3 194 51.5
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 1.7e-45 187.6 196 50.5
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 2.3e-45 187.2 193 54.9
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 3.0e-45 186.8 195 53.3
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 3.0e-45 186.8 245 44.5
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 6.6e-45 185.7 196 51.5
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 6.6e-45 185.7 194 54.1
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 8.6e-45 185.3 194 51.5
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 4.3e-44 183.0 200 47.0
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 5.6e-44 182.6 196 51.0
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 5.6e-44 182.6 193 52.3
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 1.2e-43 181.4 196 49.5
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.2e-43 181.4 196 51.0
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 2.1e-43 180.6 196 51.5
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 4.7e-43 179.5 194 53.1
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 4.7e-43 179.5 196 50.0
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 1.1e-42 178.3 188 51.1
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 2.3e-42 177.2 195 49.7
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 2.3e-42 177.2 194 49.5
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.1e-42 176.8 228 46.9
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 5.2e-42 176.0 194 51.5
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 5.2e-42 176.0 197 47.7
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 1.5e-41 174.5 172 53.5
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.5e-41 174.5 197 48.2
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 4.4e-41 172.9 185 53.0
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 9.9e-41 171.8 195 47.2
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 3.7e-40 169.9 203 48.8
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.9e-40 169.5 200 47.5
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.4e-39 167.9 194 47.9
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 9.2e-39 165.2 193 49.2
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 1.2e-38 164.9 171 53.8
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 8.6e-37 158.7 162 54.3
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.1e-36 158.3 164 52.4
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.5e-36 157.9 172 51.7
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 2.8e-35 153.7 194 44.3
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 3.6e-35 153.3 232 43.5
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 6.2e-35 152.5 200 46.0
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 3.1e-34 150.2 174 50.0
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 1.3e-32 144.8 197 43.1
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 1.9e-31 141.0 172 48.8
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 7.1e-31 139.0 248 36.7
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 2.1e-30 137.5 258 37.6
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 4.6e-30 136.3 186 43.5
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.0e-29 133.7 118 60.2
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 1.5e-28 131.3 196 40.8
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 3.3e-28 130.2 198 40.9
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 1.2e-27 128.3 165 46.1
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 2.1e-27 127.5 204 41.7
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 2.8e-27 127.1 192 41.1
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 6.2e-27 125.9 192 40.6
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.2e-24 117.5 192 39.1
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 2.9e-24 117.1 194 39.7
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 3.5e-22 110.2 153 44.4
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 6.0e-22 109.4 130 46.9
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.3e-21 107.5 93 58.1
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 6.2e-19 99.4 90 55.6
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.6e-17 94.0 94 54.3
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 4.5e-17 93.2 86 57.0
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 6.4e-16 89.4 83 54.2
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 2.4e-15 87.4 90 51.1
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 6.0e-14 82.8 78 47.4
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 6.0e-14 82.8 88 55.7
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.9e-14 82.4 119 40.3
SEGI_21834 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 1.5e-12 78.2 43 83.7
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.9e-12 77.8 104 46.2
SEGI_36333 Sequoiadendron giganteum HOM05D000234 ORTHO05D000335 5.6e-12 76.3 46 69.6
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 1.6e-11 74.7 82 46.3
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.6e-11 74.7 80 45.0
SEGI_24819 Sequoiadendron giganteum HOM05D066805 ORTHO05D005814 2.4e-10 70.9 43 67.4
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 6.9e-10 69.3 75 46.7
SEGI_25213 Sequoiadendron giganteum HOM05D000526 ORTHO05D000956 1.1e-07 62.0 42 71.4
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.6e-06 56.6 117 38.5


User provided reference genes

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