Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00832 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 3.5e-57 225.3 106 100.0
SEGI_20120 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 4.4e-36 155.2 106 67.0
SEGI_04018 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 7.6e-36 154.5 105 70.5
SEGI_06748 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 1.3e-32 143.7 105 67.6
SEGI_41011 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 9.6e-15 84.3 50 68.0
SEGI_13914 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 2.7e-09 66.2 38 68.4
Migut.D01072 Erythranthe guttata HOM05D001903 ORTHO05D001847 7.9e-09 64.7 40 72.5
SEGI_10096 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 1.3e-08 63.9 38 68.4
SEGI_05294 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 1.8e-08 63.5 40 65.0
Potri.006G068200 Populus trichocarpa HOM05D001903 ORTHO05D001847 3.0e-08 62.8 38 68.4
Solyc08g076730.4 Solanum lycopersicum HOM05D006310 ORTHO05D007768 3.0e-08 62.8 37 75.7
Sopen08g025280 Solanum pennellii HOM05D006310 ORTHO05D007768 3.0e-08 62.8 37 75.7
Mapoly0029s0147 Marchantia polymorpha HOM05D036240 ORTHO05D031199 3.9e-08 62.4 36 75.0
SEGI_10481 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 3.9e-08 62.4 37 67.6
PGR031G3884 Punica granatum HOM05D006310 ORTHO05D007768 6.7e-08 61.6 37 70.3
MSTRG.11137 Avicennia marina HOM05D001903 ORTHO05D001847 8.7e-08 61.2 41 65.9
SGA_v2.0_scaffold37G14772 Striga asiatica HOM05D001903 ORTHO05D001847 8.7e-08 61.2 38 68.4
Sabra06G0050700 Salix brachista HOM05D001903 ORTHO05D001847 1.1e-07 60.8 38 65.8
SGA_v2.0_scaffold5G02688 Striga asiatica HOM05D001903 ORTHO05D001847 1.1e-07 60.8 38 71.1
Thecc.06G022200 Theobroma cacao HOM05D001903 ORTHO05D001847 1.1e-07 60.8 38 63.2
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 1.5e-07 60.5 42 66.7
SEGI_34370 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 1.5e-07 60.5 36 69.4
Aqoxy3G02279 Aquilegia oxysepala HOM05D006310 ORTHO05D007768 1.9e-07 60.1 35 68.6
CAN.G298.28 Capsicum annuum HOM05D006310 ORTHO05D007768 1.9e-07 60.1 37 73.0
MBI04_g20344_MAGBIO Magnolia biondii HOM05D006310 ORTHO05D007768 1.9e-07 60.1 35 71.4
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 1.9e-07 60.1 42 69.0
PGR102G1074 Punica granatum HOM05D001903 ORTHO05D001847 1.9e-07 60.1 38 65.8
COL.COLO4_12956 Corchorus olitorius HOM05D001903 ORTHO05D001847 2.5e-07 59.7 38 65.8
Duzib160G0284 Durio zibethinus HOM05D001903 ORTHO05D001847 2.5e-07 59.7 38 60.5
MBI01_g36596_MAGBIO Magnolia biondii HOM05D001903 ORTHO05D001847 2.5e-07 59.7 38 65.8
Nitab4.5_0003625g0020 Nicotiana tabacum HOM05D006310 ORTHO05D007768 2.5e-07 59.7 37 73.0
PGSC0003DMG400017523 Solanum tuberosum HOM05D006310 ORTHO05D007768 2.5e-07 59.7 37 73.0
HPP92_014659 Vanilla planifolia HOM05D006310 ORTHO05D007768 2.5e-07 59.7 35 74.3
CDE02G1298 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 3.3e-07 59.3 35 71.4
HanXRQChr03g0062821 Helianthus annuus HOM05D001903 ORTHO05D001847 3.3e-07 59.3 38 65.8
Psat4g038040 Pisum sativum HOM05D001903 ORTHO05D001847 3.3e-07 59.3 38 65.8
SEGI_05061 Sequoiadendron giganteum HOM05D006310 ORTHO05D007768 3.3e-07 59.3 37 64.9
CiPaw.02G156600 Carya illinoinensis HOM05D001903 ORTHO05D001847 4.3e-07 58.9 38 63.2
CDE11G1127 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 4.3e-07 58.9 35 68.6
MD06G1036900 Malus domestica HOM05D006310 ORTHO05D007768 4.3e-07 58.9 37 67.6
Medtr4g114690 Medicago truncatula HOM05D001903 ORTHO05D001847 4.3e-07 58.9 38 65.8
Prupe.5G032400 Prunus persica HOM05D006310 ORTHO05D007768 4.3e-07 58.9 37 64.9
Hund14348 Selenicereus undatus HOM05D006310 ORTHO05D007768 4.3e-07 58.9 35 68.6
Atru.chr7.1135 Acer truncatum HOM05D001903 ORTHO05D001847 5.7e-07 58.5 37 64.9
Hma1.2p1_1144F.1_g261220 Hydrangea macrophylla HOM05D001903 ORTHO05D001847 5.7e-07 58.5 38 65.8
Potri.018G130300 Populus trichocarpa HOM05D001903 ORTHO05D001847 5.7e-07 58.5 38 60.5
SalBow2G3236 Salvia bowleyana HOM05D001903 ORTHO05D001847 5.7e-07 58.5 38 65.8
Actinidia15989 Actinidia chinensis HOM05D001903 ORTHO05D001847 7.4e-07 58.2 38 65.8
EL10Ac5g12081 Beta vulgaris HOM05D006310 ORTHO05D007768 7.4e-07 58.2 35 68.6
CDE06G1151 Ceratophyllum demersum HOM05D001903 ORTHO05D001847 7.4e-07 58.2 37 64.9
CDE07G0415 Ceratophyllum demersum HOM05D001903 ORTHO05D001847 7.4e-07 58.2 37 64.9
Haze_16546 Corylus avellana HOM05D001903 ORTHO05D001847 7.4e-07 58.2 38 63.2
Dinv30598 Davidia involucrata HOM05D001903 ORTHO05D001847 7.4e-07 58.2 38 65.8
Migut.E00791 Erythranthe guttata HOM05D006310 ORTHO05D007768 7.4e-07 58.2 37 73.0
Peaxi162Scf00332g00731 Petunia axillaris HOM05D001903 ORTHO05D001847 7.4e-07 58.2 38 65.8
Sabra18G0110600 Salix brachista HOM05D001903 ORTHO05D001847 7.4e-07 58.2 38 63.2
Sabra18G0110800 Salix brachista HOM05D001903 ORTHO05D001847 7.4e-07 58.2 38 63.2
vmacro06134 Vaccinium macrocarpon HOM05D001903 ORTHO05D001847 7.4e-07 58.2 38 63.2
CANSAT11G1026 Cannabis sativa HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 63.2
Migut.I00772 Erythranthe guttata HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 63.2
Eucgr.C04231 Eucalyptus grandis HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 63.2
HanXRQChr10g0315611 Helianthus annuus HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 63.2
Lsat_1_v5_gn_7_107661 Lactuca sativa HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 63.2
MD17G1210200 Malus domestica HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 65.8
Manes.06G057500 Manihot esculenta HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 63.2
Manes.14G133300 Manihot esculenta HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 63.2
Nn2g12060 Nelumbo nucifera HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 60.5
QL02p088755 Quercus lobata HOM05D001903 ORTHO05D001847 9.7e-07 57.8 38 60.5
Atru.chr1.2983 Acer truncatum HOM05D001903 ORTHO05D001847 1.3e-06 57.4 39 61.5
CANSAT56G4355 Cannabis sativa HOM05D001903 ORTHO05D001847 1.3e-06 57.4 38 63.2
Ciclev10025712m.g Citrus clementina HOM05D001903 ORTHO05D001847 1.3e-06 57.4 39 61.5
DCAR_008251 Daucus carota HOM05D006310 ORTHO05D007768 1.3e-06 57.4 37 70.3
Duzib235G1087 Durio zibethinus HOM05D001903 ORTHO05D001847 1.3e-06 57.4 38 57.9
Lalb_Chr13g0301771 Lupinus albus HOM05D001903 ORTHO05D001847 1.3e-06 57.4 38 63.2
MD15G1171400 Malus domestica HOM05D001903 ORTHO05D001847 1.3e-06 57.4 38 57.9
Potri.018G130100 Populus trichocarpa HOM05D001903 ORTHO05D001847 1.3e-06 57.4 38 63.2
SalBow6G2738 Salvia bowleyana HOM05D001903 ORTHO05D001847 1.3e-06 57.4 37 67.6
SalBow6G3359 Salvia bowleyana HOM05D001903 ORTHO05D001847 1.3e-06 57.4 37 67.6
Aqoxy3G02851 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 65.8
Aqoxy54s001 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 65.8
Aqoxy7G03684 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 65.8
MSTRG.22740 Avicennia marina HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 65.8
MSTRG.22741 Avicennia marina HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 65.8
Cc04_g04320 Coffea canephora HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 63.2
Duzib187G1121 Durio zibethinus HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 63.2
Gohir.A05G015600 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 63.2
Gorai.009G016900 Gossypium raimondii HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 63.2
Nitab4.5_0000127g0100 Nicotiana tabacum HOM05D006310 ORTHO05D007768 1.6e-06 57.0 37 67.6
Phvul.003G165900 Phaseolus vulgaris HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 63.2
RcHm_v2.0_Chr2g0135711 Rosa chinensis HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 63.2
Hund09255 Selenicereus undatus HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 63.2
TWI18G0102 Tripterygium wilfordii HOM05D001903 ORTHO05D001847 1.6e-06 57.0 38 63.2
TAR629G1434 Trochodendron aralioides HOM05D006310 ORTHO05D007768 1.6e-06 57.0 35 65.7
Ah.14g079690 Amaranthus hybridus HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 63.2
AL2G41400 Arabidopsis lyrata HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 65.8
AT1G80130 Arabidopsis thaliana HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 65.8
Eucgr.F03869 Eucalyptus grandis HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 63.2
FvH4_5g22450 Fragaria vesca HOM05D006310 ORTHO05D007768 2.2e-06 56.6 112 32.1
Glyma.13G165800 Glycine max HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 63.2
Glyma.17G113600 Glycine max HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 63.2
Gohir.D05G016700 Gossypium hirsutum HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 63.2
Lj5A71G74 Lonicera japonica HOM05D001903 ORTHO05D001847 2.2e-06 56.6 39 61.5
Lj4g0003692 Lotus japonicus HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 63.2
Manes.04G113400 Manihot esculenta HOM05D001903 ORTHO05D001847 2.2e-06 56.6 39 59.0
Prupe.3G085500 Prunus persica HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 63.2
VMungo1080G0874 Vigna mungo HOM05D006310 ORTHO05D007768 2.2e-06 56.6 37 64.9
VMungo1215G2575 Vigna mungo HOM05D001903 ORTHO05D001847 2.2e-06 56.6 38 63.2
Zm00001eb024820 Zea mays HOM05D006310 ORTHO05D007768 2.2e-06 56.6 37 64.9
ATR0665G126 Amborella trichopoda HOM05D006310 ORTHO05D007768 2.8e-06 56.2 36 61.1
EL10Ac8g18677 Beta vulgaris HOM05D001903 ORTHO05D001847 2.8e-06 56.2 38 60.5
CiPaw.01G246800 Carya illinoinensis HOM05D001903 ORTHO05D001847 2.8e-06 56.2 38 60.5
Ca_21670_v3 Cicer arietinum L. HOM05D001903 ORTHO05D001847 2.8e-06 56.2 38 63.2
FvH4_6g29850 Fragaria vesca HOM05D001903 ORTHO05D001847 2.8e-06 56.2 38 63.2
FAN02G2078 Fragaria x ananassa HOM05D001903 ORTHO05D001847 2.8e-06 56.2 38 63.2
FAN05G3945 Fragaria x ananassa HOM05D001903 ORTHO05D001847 2.8e-06 56.2 38 63.2
FAN09G4604 Fragaria x ananassa HOM05D001903 ORTHO05D001847 2.8e-06 56.2 38 63.2
FAN14G4643 Fragaria x ananassa HOM05D001903 ORTHO05D001847 2.8e-06 56.2 38 63.2
Rhsim12G0191600 Rhododendron simsii HOM05D001903 ORTHO05D001847 2.8e-06 56.2 38 63.2
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 3.7e-06 55.8 35 65.7
CSS0006923 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 3.7e-06 55.8 35 68.6
CSS0046247 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 3.7e-06 55.8 38 60.5
CSS0048597 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 3.7e-06 55.8 35 68.6
Ciclev10009189m.g Citrus clementina HOM05D001903 ORTHO05D001847 3.7e-06 55.8 38 57.9
COL.COLO4_35107 Corchorus olitorius HOM05D001903 ORTHO05D001847 3.7e-06 55.8 38 60.5
Haze_08202 Corylus avellana HOM05D006310 ORTHO05D007768 3.7e-06 55.8 35 65.7
Gohir.D05G127200 Gossypium hirsutum HOM05D001903 ORTHO05D001847 3.7e-06 55.8 38 55.3
Gorai.009G131300 Gossypium raimondii HOM05D001903 ORTHO05D001847 3.7e-06 55.8 38 55.3
QL05p029561 Quercus lobata HOM05D001903 ORTHO05D001847 3.7e-06 55.8 38 63.2
Sc08g0006520 Simmondsia chinensis HOM05D001903 ORTHO05D001847 3.7e-06 55.8 38 63.2
Thecc.09G128300 Theobroma cacao HOM05D001903 ORTHO05D001847 3.7e-06 55.8 38 60.5
TPR.G26499 Trifolium pratense HOM05D001903 ORTHO05D001847 3.7e-06 55.8 38 63.2
VMungo1215G2715 Vigna mungo HOM05D006310 ORTHO05D007768 3.7e-06 55.8 37 64.9
Actinidia08800 Actinidia chinensis HOM05D001903 ORTHO05D001847 4.8e-06 55.5 38 60.5
Actinidia14793 Actinidia chinensis HOM05D006310 ORTHO05D007768 4.8e-06 55.5 35 68.6
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea HOM05D006310 ORTHO05D007768 4.8e-06 55.5 35 68.6
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea HOM05D006310 ORTHO05D007768 4.8e-06 55.5 35 68.6
CANSAT21G0851 Cannabis sativa HOM05D006310 ORTHO05D007768 4.8e-06 55.5 33 69.7
ECA240G4176 Erigeron canadensis HOM05D001903 ORTHO05D001847 4.8e-06 55.5 38 60.5
Eucgr.L02715 Eucalyptus grandis HOM05D001903 ORTHO05D001847 4.8e-06 55.5 38 60.5
FAN18G0493 Fragaria x ananassa HOM05D006310 ORTHO05D007768 4.8e-06 55.5 112 32.1
FAN18G3281 Fragaria x ananassa HOM05D006310 ORTHO05D007768 4.8e-06 55.5 112 32.1
Glyma.01G017000 Glycine max HOM05D006310 ORTHO05D007768 4.8e-06 55.5 37 64.9
Gohir.A08G155500 Gossypium hirsutum HOM05D006310 ORTHO05D007768 4.8e-06 55.5 35 62.9
HanXRQChr06g0167641 Helianthus annuus HOM05D006310 ORTHO05D007768 4.8e-06 55.5 36 66.7
Lalb_Chr05g0215911 Lupinus albus HOM05D006310 ORTHO05D007768 4.8e-06 55.5 35 68.6
Nn8g39477 Nelumbo nucifera HOM05D001903 ORTHO05D001847 4.8e-06 55.5 37 62.2
Nitab4.5_0007793g0020 Nicotiana tabacum HOM05D001903 ORTHO05D001847 4.8e-06 55.5 38 60.5
ClCG09G011810 Citrullus lanatus HOM05D006310 ORTHO05D007768 6.3e-06 55.1 37 59.5
Eucgr.E00268 Eucalyptus grandis HOM05D006310 ORTHO05D007768 6.3e-06 55.1 37 67.6
Gohir.A05G126300 Gossypium hirsutum HOM05D001903 ORTHO05D001847 6.3e-06 55.1 38 55.3
Gorai.010G137200 Gossypium raimondii HOM05D001903 ORTHO05D001847 6.3e-06 55.1 36 61.1
Nn3g19447 Nelumbo nucifera HOM05D006310 ORTHO05D007768 6.3e-06 55.1 39 56.4
TWI15G1132 Tripterygium wilfordii HOM05D006310 ORTHO05D007768 6.3e-06 55.1 39 66.7
TAR626G0355 Trochodendron aralioides HOM05D001903 ORTHO05D001847 6.3e-06 55.1 39 61.5
TAR626G1723 Trochodendron aralioides HOM05D001903 ORTHO05D001847 6.3e-06 55.1 39 61.5
vmacro16774 Vaccinium macrocarpon HOM05D001903 ORTHO05D001847 6.3e-06 55.1 38 60.5
vmacro16901 Vaccinium macrocarpon HOM05D001903 ORTHO05D001847 6.3e-06 55.1 38 60.5
Carub.0002s2739 Capsella rubella HOM05D001903 ORTHO05D001847 8.2e-06 54.7 38 63.2
AUR62013344 Chenopodium quinoa HOM05D001903 ORTHO05D001847 8.2e-06 54.7 38 57.9
ClCG06G011260 Citrullus lanatus HOM05D001903 ORTHO05D001847 8.2e-06 54.7 38 55.3
MELO3C010333.2 Cucumis melo HOM05D001903 ORTHO05D001847 8.2e-06 54.7 38 55.3
CsaV3_1G030300 Cucumis sativus L. HOM05D001903 ORTHO05D001847 8.2e-06 54.7 38 55.3
Dinv25232 Davidia involucrata HOM05D006310 ORTHO05D007768 8.2e-06 54.7 35 68.6
Duzib150G0453 Durio zibethinus HOM05D001903 ORTHO05D001847 8.2e-06 54.7 37 59.5
MBI04_g29347_MAGBIO Magnolia biondii HOM05D001903 ORTHO05D001847 8.2e-06 54.7 38 57.9
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 8.2e-06 54.7 37 64.9
Prupe.7G244700 Prunus persica HOM05D001903 ORTHO05D001847 8.2e-06 54.7 38 55.3
Sp5g35670 Schrenkiella parvula HOM05D001903 ORTHO05D001847 8.2e-06 54.7 38 60.5
TAR383G0227 Trochodendron aralioides HOM05D001903 ORTHO05D001847 8.2e-06 54.7 38 60.5


User provided reference genes

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