Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00480 Sequoiadendron giganteum HOM05D000196 ORTHO05D384946 4.4e-256 887.5 454 100.0
SEGI_38939 Sequoiadendron giganteum HOM05D000196 ORTHO05D000279 2.8e-226 788.5 433 94.7
SEGI_07040 Sequoiadendron giganteum HOM05D000196 ORTHO05D000279 1.8e-39 167.9 531 30.1
SEGI_08296 Sequoiadendron giganteum HOM05D000196 ORTHO05D000279 5.0e-18 96.7 427 25.5
SEGI_33069 Sequoiadendron giganteum HOM05D000196 ORTHO05D000279 3.0e-15 87.4 311 28.0
MBI18_g05907_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 1.4e-12 78.6 355 27.6
MBI13_g24904_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 1.9e-09 68.2 260 28.8
TAR365G0580 Trochodendron aralioides HOM05D000196 ORTHO05D000279 2.7e-08 64.3 250 29.2
Prupe.1G334200 Prunus persica HOM05D000196 ORTHO05D000279 6.1e-08 63.2 157 32.5
Sabra10G0077400 Salix brachista HOM05D000196 ORTHO05D000279 1.4e-07 62.0 156 33.3
Haze_10868 Corylus avellana HOM05D000196 ORTHO05D000279 2.3e-07 61.2 153 34.0
TAR629G2583 Trochodendron aralioides HOM05D000196 ORTHO05D000279 3.0e-07 60.8 154 33.8
GSVIVG01011650001 Vitis vinifera HOM05D000196 ORTHO05D000279 4.0e-07 60.5 143 35.0
TWI74G1239 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 5.2e-07 60.1 299 27.4
VMungo1215G0986 Vigna mungo HOM05D000196 ORTHO05D000279 5.2e-07 60.1 158 31.6
Duzib268G0379 Durio zibethinus HOM05D000196 ORTHO05D000279 6.8e-07 59.7 259 28.2
MSTRG.10126 Avicennia marina HOM05D000196 ORTHO05D000279 8.8e-07 59.3 134 32.1
MSTRG.3877 Avicennia marina HOM05D000196 ORTHO05D000279 8.8e-07 59.3 121 36.4
ATR0706G279 Amborella trichopoda HOM05D000196 ORTHO05D000279 1.2e-06 58.9 213 29.1
Dinv26354 Davidia involucrata HOM05D000196 ORTHO05D000279 1.2e-06 58.9 157 31.8
Nn3g21597 Nelumbo nucifera HOM05D000196 ORTHO05D000279 1.2e-06 58.9 107 36.4
Nn4g25687 Nelumbo nucifera HOM05D000196 ORTHO05D000279 1.5e-06 58.5 242 28.9
Duzib251G0540 Durio zibethinus HOM05D000196 ORTHO05D000279 2.0e-06 58.2 157 32.5
Oeu016476.1 Olea europaea HOM05D000196 ORTHO05D000279 2.6e-06 57.8 139 33.1
Ca_12530_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 3.4e-06 57.4 159 28.9
Ca_12535_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 3.4e-06 57.4 159 28.9
Dinv07718 Davidia involucrata HOM05D000196 ORTHO05D000279 3.4e-06 57.4 117 35.9
Gohir.D09G236600 Gossypium hirsutum HOM05D000196 ORTHO05D000279 3.4e-06 57.4 147 35.4
Gorai.006G259700 Gossypium raimondii HOM05D000196 ORTHO05D000279 3.4e-06 57.4 147 35.4
Actinidia36620 Actinidia chinensis HOM05D000196 ORTHO05D000279 4.4e-06 57.0 267 26.2
Glyma.02G085900 Glycine max HOM05D000196 ORTHO05D000279 5.7e-06 56.6 159 32.7
CSS0024071 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 7.5e-06 56.2 80 45.0
CSS0043810 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 7.5e-06 56.2 80 45.0
Ciclev10014527m.g Citrus clementina HOM05D000196 ORTHO05D000279 7.5e-06 56.2 157 31.8
Gohir.A09G235800 Gossypium hirsutum HOM05D000196 ORTHO05D000279 7.5e-06 56.2 146 34.9
Potri.010G105600 Populus trichocarpa HOM05D000196 ORTHO05D000279 7.5e-06 56.2 157 31.2
MBI19_g41132_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 9.7e-06 55.8 259 26.6
Oeu006434.2 Olea europaea HOM05D000196 ORTHO05D000279 9.7e-06 55.8 118 33.9
Os03g0224200 Oryza sativa ssp. japonica HOM05D000196 ORTHO05D000279 9.7e-06 55.8 422 27.5
SEGI_17815 Sequoiadendron giganteum HOM05D000196 ORTHO05D000279 9.7e-06 55.8 89 38.2


User provided reference genes

Program Settings