Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 3.9e-97 358.2 192 100.0
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.0e-68 263.8 192 73.4
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 4.3e-64 248.4 192 77.1
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.3e-20 103.2 112 50.0
Rhsim13G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.9e-19 100.1 93 53.8
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.2e-18 97.4 108 48.1
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.0e-17 92.8 113 43.4
Rhsim10G0158100 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.3e-15 85.1 107 43.0
Rhsim12G0034900 Rhododendron simsii HOM05D042119 ORTHO05D007789 2.7e-13 79.7 119 44.5
Rhsim12G0082100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.3e-11 72.8 110 34.5
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.8e-10 69.7 108 34.3
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 1.8e-09 67.0 116 38.8
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 2.3e-09 66.6 109 35.8
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.1e-09 66.2 111 36.0
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.0e-09 65.9 111 35.1
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.0e-09 65.9 110 38.2
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 1.2e-08 64.3 100 35.0
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.0e-08 63.5 108 40.7
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 2.6e-08 63.2 82 35.4
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.6e-08 63.2 111 35.1
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 3.4e-08 62.8 85 43.5
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 4.4e-08 62.4 81 39.5
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 4.4e-08 62.4 111 32.4
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 5.8e-08 62.0 81 39.5
Cc02_g14140 Coffea canephora HOM05D039367 ORTHO05D044651 5.8e-08 62.0 124 34.7
Cc02_g14170 Coffea canephora HOM05D039367 ORTHO05D044651 5.8e-08 62.0 124 34.7
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 5.8e-08 62.0 112 35.7
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 5.8e-08 62.0 109 33.9
CiPaw.09G138100 Carya illinoinensis HOM05D010787 ORTHO05D011812 7.5e-08 61.6 111 35.1
Rhsim06G0049300 Rhododendron simsii HOM05D031946 ORTHO05D007789 7.5e-08 61.6 117 35.0
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.3e-07 60.8 111 33.3
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.3e-07 60.8 114 29.8
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.9e-07 59.7 72 44.4
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.7e-07 59.3 111 32.4
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.4e-07 58.5 102 35.3
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-06 57.8 101 35.6
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-06 57.8 79 39.2
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.4e-06 57.4 114 31.6
Sed0008488 Sechium edule HOM05D034586 ORTHO05D007789 1.4e-06 57.4 98 30.6
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.9e-06 57.0 103 34.0
Rhsim07G0120100 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.9e-06 57.0 113 32.7
vmacro14314 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.9e-06 57.0 109 34.9
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 2.4e-06 56.6 102 33.3
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 4.1e-06 55.8 106 30.2
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 4.1e-06 55.8 106 30.2
Rhsim06G0060500 Rhododendron simsii HOM05D031946 ORTHO05D007789 7.0e-06 55.1 110 33.6
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 9.2e-06 54.7 79 38.0
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 9.2e-06 54.7 81 42.0
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.2e-06 54.7 109 37.6


User provided reference genes

Program Settings