Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.9e-37 159.1 108 100.0
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.1e-35 151.8 108 96.3
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-31 139.4 108 94.4
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-31 139.4 108 77.8
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.6e-15 85.1 65 69.2
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.6e-15 85.1 109 73.4
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.7e-15 84.7 67 59.7
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.1e-15 84.3 65 69.2
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 8.0e-15 84.0 92 73.9
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.3e-14 82.4 66 57.6
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 5.2e-14 81.3 90 55.6
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 6.7e-14 80.9 101 63.4
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 8.8e-14 80.5 91 61.5
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 8.8e-14 80.5 91 62.6
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.0e-13 79.3 94 70.2
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 3.3e-13 78.6 68 54.4
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 7.4e-13 77.4 82 54.9
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 9.7e-13 77.0 66 54.5
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.2e-12 75.9 90 65.6
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 2.2e-12 75.9 90 65.6
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.2e-12 75.9 48 64.6
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.8e-12 75.5 90 68.9
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.7e-12 75.1 77 64.9
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 6.3e-12 74.3 94 61.7
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 8.2e-12 73.9 112 59.8
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 8.2e-12 73.9 90 71.1
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 8.2e-12 73.9 50 62.0
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.1e-11 73.6 64 51.6
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.1e-11 73.6 88 64.8
Rhsim11G0084900 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-11 73.2 114 64.9
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 2.4e-11 72.4 44 72.7
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 3.1e-11 72.0 79 72.2
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.1e-11 72.0 45 66.7
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 3.1e-11 72.0 92 68.5
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 5.3e-11 71.2 92 54.3
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 7.0e-11 70.9 51 58.8
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 7.0e-11 70.9 89 69.7
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.0e-11 70.9 79 67.1
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.1e-11 70.5 107 56.1
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 9.1e-11 70.5 44 70.5
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.2e-10 70.1 103 58.3
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.2e-10 70.1 93 61.3
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 2.0e-10 69.3 44 68.2
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 2.0e-10 69.3 88 60.2
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.0e-10 69.3 58 53.4
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.6e-10 68.9 96 65.6
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.6e-10 68.9 51 60.8
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 3.5e-10 68.6 90 57.8
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.5e-10 68.6 93 68.8
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 4.5e-10 68.2 44 68.2
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 4.5e-10 68.2 89 64.0
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.5e-10 68.2 43 67.4
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.5e-10 68.2 79 65.8
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 4.5e-10 68.2 79 65.8
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 7.7e-10 67.4 108 57.4
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.0e-09 67.0 77 61.0
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.3e-09 66.6 89 58.4
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.3e-09 66.6 44 68.2
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 1.7e-09 66.2 86 64.0
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 1.7e-09 66.2 102 58.8
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 2.2e-09 65.9 88 64.8
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 2.9e-09 65.5 44 65.9
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 2.9e-09 65.5 44 65.9
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.9e-09 65.5 74 45.9
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.9e-09 65.5 43 65.1
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.8e-09 65.1 43 65.1
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.0e-09 64.7 75 76.0
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.5e-09 64.3 43 65.1
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 6.5e-09 64.3 101 52.5
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 6.5e-09 64.3 37 75.7
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 8.5e-09 63.9 92 48.9
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 1.1e-08 63.5 44 63.6
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.1e-08 63.5 85 64.7
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.5e-08 63.2 75 69.3
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.9e-08 62.8 43 62.8
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.9e-08 62.8 90 64.4
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 2.5e-08 62.4 43 62.8
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 2.5e-08 62.4 61 50.8
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 3.2e-08 62.0 43 62.8
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 3.2e-08 62.0 50 56.0
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 4.2e-08 61.6 43 65.1
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.2e-08 61.6 96 63.5
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.2e-08 60.8 82 68.3
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 9.4e-08 60.5 107 44.9
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 9.4e-08 60.5 74 43.2
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-07 60.1 43 60.5
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-07 60.1 43 67.4
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-07 60.1 43 60.5
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 1.6e-07 59.7 43 58.1
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.6e-07 59.7 89 65.2
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.1e-07 59.3 40 67.5
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.1e-07 59.3 40 67.5
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.1e-07 59.3 71 46.5
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.7e-07 58.9 43 65.1
Actinidia29537 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.6e-07 58.5 65 44.6
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 6.1e-07 57.8 39 64.1
SEGI_17221 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.1e-07 57.8 39 61.5
Actinidia04758 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.0e-06 57.0 65 46.2
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 1.0e-06 57.0 92 63.0
Lsat_1_v5_gn_9_41200 Lactuca sativa HOM05D002879 ORTHO05D002930 1.0e-06 57.0 43 58.1
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 1.0e-06 57.0 43 58.1
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.8e-06 56.2 61 42.6
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.8e-06 56.2 61 42.6
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.8e-06 56.2 61 42.6
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.8e-06 56.2 73 41.1
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.8e-06 56.2 73 41.1
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.8e-06 56.2 40 62.5
unitig_747.g21665 Utricularia gibba HOM05D002879 ORTHO05D002930 1.8e-06 56.2 43 55.8
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.3e-06 55.8 65 47.7
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 3.0e-06 55.5 92 34.8
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 3.0e-06 55.5 65 47.7
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 5.2e-06 54.7 89 61.8
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 5.2e-06 54.7 50 52.0
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.2e-06 54.7 90 63.3
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.2e-06 54.7 90 63.3
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.2e-06 54.7 43 60.5
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 6.7e-06 54.3 39 64.1
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.7e-06 54.3 43 62.8
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 8.8e-06 53.9 88 59.1
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 8.8e-06 53.9 88 52.3


User provided reference genes

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