Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim09G0136300 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.0e-41 172.9 83 100.0
Rhsim09G0136500 Rhododendron simsii HOM05D003473 ORTHO05D003872 3.8e-25 117.9 148 47.3
Rhsim09G0136100 Rhododendron simsii HOM05D003473 ORTHO05D003872 4.2e-24 114.4 145 46.9
Rhsim09G0136400 Rhododendron simsii HOM05D003473 ORTHO05D003872 4.4e-21 104.4 147 42.9
Rhsim09G0135600 Rhododendron simsii HOM05D003473 ORTHO05D003872 8.5e-17 90.1 146 41.1
Rhsim09G0136000 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.9e-16 89.0 145 40.7
Rhsim09G0136200 Rhododendron simsii HOM05D003473 ORTHO05D003872 5.5e-16 87.4 149 38.9
Rhsim09G0135200 Rhododendron simsii HOM05D003473 ORTHO05D003872 7.2e-16 87.0 146 39.7
RhsimUnG0155700 Rhododendron simsii HOM05D003473 ORTHO05D003872 9.4e-16 86.7 158 38.6
RhsimUnG0083500 Rhododendron simsii HOM05D003473 ORTHO05D003872 8.0e-15 83.6 158 37.3
vmacro10372 Vaccinium macrocarpon HOM05D003473 ORTHO05D003872 7.0e-11 70.5 41 78.0
Actinidia38935 Actinidia chinensis HOM05D003473 ORTHO05D003872 6.5e-09 63.9 41 70.7
Cfa006361 Carpinus fangiana HOM05D003473 ORTHO05D003872 2.5e-08 62.0 41 68.3
CSS0019381 Camellia sinensis var. sinensis HOM05D003473 ORTHO05D003872 3.2e-08 61.6 37 78.4
Hma1.2p1_1007F.1_g247120 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 4.2e-08 61.2 41 65.9
Haze_04416 Corylus avellana HOM05D003473 ORTHO05D003872 1.6e-07 59.3 41 63.4
Hma1.2p1_1007F.1_g247110 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 1.6e-07 59.3 40 65.0
Thecc.05G270100 Theobroma cacao HOM05D003473 ORTHO05D003872 1.6e-07 59.3 41 65.9
COL.COLO4_15495 Corchorus olitorius HOM05D003473 ORTHO05D003872 2.1e-07 58.9 41 65.9
THA.LOC104820771 Tarenaya hassleriana HOM05D003473 ORTHO05D003872 2.7e-07 58.5 36 75.0
Aa31LG11G8510 Aethionema arabicum HOM05D003473 ORTHO05D003872 3.6e-07 58.2 41 63.4
Gohir.A11G246500 Gossypium hirsutum HOM05D003473 ORTHO05D003872 3.6e-07 58.2 41 63.4
Duzib177G0657 Durio zibethinus HOM05D003473 ORTHO05D003872 4.7e-07 57.8 41 63.4
Sc20g0000670 Simmondsia chinensis HOM05D003473 ORTHO05D003872 4.7e-07 57.8 37 67.6
SGA_v2.0_scaffold2G01010 Striga asiatica HOM05D003473 ORTHO05D003872 4.7e-07 57.8 40 60.0
Dinv15516 Davidia involucrata HOM05D003473 ORTHO05D003872 6.1e-07 57.4 41 65.9
Dinv25278 Davidia involucrata HOM05D003473 ORTHO05D003872 6.1e-07 57.4 41 65.9
Gohir.D11G256800 Gossypium hirsutum HOM05D003473 ORTHO05D003872 6.1e-07 57.4 37 67.6
Gorai.007G275200 Gossypium raimondii HOM05D003473 ORTHO05D003872 6.1e-07 57.4 37 67.6
Sp2g19990 Schrenkiella parvula HOM05D003473 ORTHO05D003872 6.1e-07 57.4 36 69.4
TPR.G6958 Trifolium pratense HOM05D003473 ORTHO05D003872 6.1e-07 57.4 41 63.4
EL10Ac4g08995 Beta vulgaris HOM05D003473 ORTHO05D003872 8.0e-07 57.0 41 61.0
Glyma.03G250300 Glycine max HOM05D003473 ORTHO05D003872 8.0e-07 57.0 41 61.0
Nitab4.5_0001913g0170 Nicotiana tabacum HOM05D003473 ORTHO05D003872 8.0e-07 57.0 41 61.0
MSTRG.8227 Avicennia marina HOM05D003473 ORTHO05D003872 1.0e-06 56.6 41 61.0
Carub.0006s2613 Capsella rubella HOM05D003473 ORTHO05D003872 1.0e-06 56.6 36 66.7
Migut.F01540 Erythranthe guttata HOM05D003473 ORTHO05D003872 1.0e-06 56.6 41 61.0
Nitab4.5_0011129g0030 Nicotiana tabacum HOM05D003473 ORTHO05D003872 1.0e-06 56.6 41 61.0
Lj2C44G25 Lonicera japonica HOM05D003473 ORTHO05D003872 1.4e-06 56.2 38 68.4
GSVIVG01023451001 Vitis vinifera HOM05D003473 ORTHO05D003872 1.4e-06 56.2 36 69.4
BcaB04g19636 Brassica carinata HOM05D003473 ORTHO05D003872 1.8e-06 55.8 36 66.7
A09p05020 Brassica napus HOM05D003473 ORTHO05D003872 1.8e-06 55.8 36 66.7
BraA09t36141Z Brassica rapa HOM05D003473 ORTHO05D003872 1.8e-06 55.8 36 66.7
DCAR_030978 Daucus carota HOM05D003473 ORTHO05D003872 1.8e-06 55.8 37 64.9
Duzib128G0977 Durio zibethinus HOM05D003473 ORTHO05D003872 1.8e-06 55.8 41 61.0
Eucgr.B02152 Eucalyptus grandis HOM05D003473 ORTHO05D003872 1.8e-06 55.8 35 71.4
Eucgr.B02425 Eucalyptus grandis HOM05D003473 ORTHO05D003872 1.8e-06 55.8 35 71.4
Sed0013546 Sechium edule HOM05D003473 ORTHO05D003872 1.8e-06 55.8 35 68.6
Carub.0007s3766 Capsella rubella HOM05D003473 ORTHO05D003872 2.3e-06 55.5 36 69.4
Eucgr.B02153 Eucalyptus grandis HOM05D003473 ORTHO05D003872 2.3e-06 55.5 35 71.4
Peaxi162Scf00718g00014 Petunia axillaris HOM05D003473 ORTHO05D003872 2.3e-06 55.5 41 61.0
ClCG11G010530 Citrullus lanatus HOM05D003473 ORTHO05D003872 3.0e-06 55.1 35 68.6
TWI56G1190 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 3.0e-06 55.1 37 62.2
BcaC04g23717 Brassica carinata HOM05D003473 ORTHO05D003872 4.0e-06 54.7 36 63.9
A06p38150 Brassica napus HOM05D003473 ORTHO05D003872 4.0e-06 54.7 36 63.9
C09p05430 Brassica napus HOM05D003473 ORTHO05D003872 4.0e-06 54.7 36 63.9
BolC9t53472H Brassica oleracea HOM05D003473 ORTHO05D003872 4.0e-06 54.7 36 63.9
BraA06t26728Z Brassica rapa HOM05D003473 ORTHO05D003872 4.0e-06 54.7 36 63.9
CAN.G24.3 Capsicum annuum HOM05D003473 ORTHO05D003872 4.0e-06 54.7 35 68.6
Ca_09457_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 4.0e-06 54.7 41 61.0
Medtr7g115570 Medicago truncatula HOM05D003473 ORTHO05D003872 4.0e-06 54.7 35 68.6
BcaC06g30691 Brassica carinata HOM05D003473 ORTHO05D003872 5.2e-06 54.3 36 63.9
Cc02_g08740 Coffea canephora HOM05D003473 ORTHO05D003872 5.2e-06 54.3 36 66.7
Thhalv10003947m.g Eutrema salsugineum HOM05D003473 ORTHO05D003872 5.2e-06 54.3 37 62.2
Prupe.6G350700 Prunus persica HOM05D003473 ORTHO05D003872 5.2e-06 54.3 37 62.2
PGSC0003DMG400028063 Solanum tuberosum HOM05D003473 ORTHO05D003872 5.2e-06 54.3 41 58.5
MSTRG.314 Avicennia marina HOM05D003473 ORTHO05D003872 6.8e-06 53.9 37 64.9
Carub.0006s2614 Capsella rubella HOM05D003473 ORTHO05D003872 6.8e-06 53.9 36 63.9
CiPaw.07G073400 Carya illinoinensis HOM05D003473 ORTHO05D003872 6.8e-06 53.9 41 61.0
Sopen06g012690 Solanum pennellii HOM05D003473 ORTHO05D003872 6.8e-06 53.9 35 68.6
TWI36G0550 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 6.8e-06 53.9 37 59.5
Atru.chr2.998 Acer truncatum HOM05D003473 ORTHO05D003872 8.8e-06 53.5 41 56.1
Solyc06g036640.4 Solanum lycopersicum HOM05D003473 ORTHO05D003872 8.8e-06 53.5 35 68.6


User provided reference genes

Program Settings