Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 1.4e-37 159.1 77 100.0
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 1.3e-19 99.4 80 68.8
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 3.2e-18 94.7 78 62.8
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 7.2e-18 93.6 82 63.4
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 1.3e-16 89.4 73 63.0
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 2.3e-16 88.6 90 61.1
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 2.3e-16 88.6 90 60.0
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 3.0e-16 88.2 77 58.4
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 3.9e-16 87.8 76 61.8
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 3.9e-16 87.8 73 61.6
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 5.1e-16 87.4 79 58.2
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 5.1e-16 87.4 84 57.1
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 6.7e-16 87.0 78 62.8
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 6.7e-16 87.0 74 62.2
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 6.7e-16 87.0 75 64.0
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.1e-15 86.3 74 60.8
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.9e-15 85.5 78 55.1
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 2.5e-15 85.1 83 55.4
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 3.3e-15 84.7 73 60.3
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 4.3e-15 84.3 78 61.5
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.3e-15 84.3 78 55.1
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 7.4e-15 83.6 81 54.3
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 9.7e-15 83.2 73 64.4
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 2.2e-14 82.0 81 60.5
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.2e-14 82.0 71 60.6
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.2e-14 82.0 71 60.6
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 2.2e-14 82.0 73 61.6
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 2.8e-14 81.6 78 59.0
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 2.8e-14 81.6 87 50.6
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 2.8e-14 81.6 78 56.4
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 3.7e-14 81.3 73 60.3
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.8e-14 80.9 75 54.7
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 6.3e-14 80.5 74 55.4
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 6.3e-14 80.5 81 60.5
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 1.1e-13 79.7 85 52.9
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.1e-13 79.7 91 48.4
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.1e-13 79.7 91 48.4
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.1e-13 79.7 82 56.1
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 1.1e-13 79.7 73 60.3
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 1.1e-13 79.7 80 55.0
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 1.4e-13 79.3 77 59.7
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 1.4e-13 79.3 75 56.0
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 1.4e-13 79.3 71 59.2
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.8e-13 79.0 79 50.6
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 3.1e-13 78.2 80 52.5
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 5.3e-13 77.4 80 53.8
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 6.9e-13 77.0 75 61.3
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 9.1e-13 76.6 84 52.4
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 9.1e-13 76.6 88 50.0
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.5e-12 75.9 74 56.8
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.5e-12 75.9 80 56.2
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.5e-12 75.9 80 56.2
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.5e-12 75.9 74 55.4
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 2.0e-12 75.5 76 56.6
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 2.6e-12 75.1 84 51.2
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.6e-12 75.1 76 55.3
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.4e-12 74.7 76 55.3
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 3.4e-12 74.7 76 55.3
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 3.4e-12 74.7 79 53.2
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 4.5e-12 74.3 80 47.5
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.0e-11 73.2 80 55.0
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 1.3e-11 72.8 77 53.2
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.7e-11 72.4 69 53.6
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.7e-11 72.4 82 54.9
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.7e-11 72.4 77 54.5
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 2.2e-11 72.0 83 49.4
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 2.2e-11 72.0 83 49.4
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 2.2e-11 72.0 81 50.6
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 2.9e-11 71.6 82 50.0
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 2.9e-11 71.6 82 50.0
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 5.0e-11 70.9 74 48.6
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 5.0e-11 70.9 77 53.2
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 8.5e-11 70.1 69 53.6
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-10 69.7 79 46.8
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-10 69.7 70 51.4
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.4e-10 69.3 85 50.6
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 1.4e-10 69.3 75 48.0
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.9e-10 68.9 74 47.3
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 2.5e-10 68.6 76 48.7
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 4.2e-10 67.8 74 48.6
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 4.2e-10 67.8 74 48.6
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 4.2e-10 67.8 74 48.6
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 4.2e-10 67.8 74 48.6
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 4.2e-10 67.8 87 47.1
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 7.2e-10 67.0 74 47.3
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 9.4e-10 66.6 71 54.9
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 9.4e-10 66.6 69 52.2
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 1.2e-09 66.2 72 52.8
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 1.2e-09 66.2 71 47.9
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 1.2e-09 66.2 72 48.6
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.6e-09 65.9 76 43.4
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 1.6e-09 65.9 77 46.8
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 3.6e-09 64.7 72 45.8
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 4.6e-09 64.3 76 50.0
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 4.6e-09 64.3 69 53.6
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 4.6e-09 64.3 69 50.7
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 4.6e-09 64.3 69 50.7
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 4.6e-09 64.3 72 52.8
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 7.9e-09 63.5 78 46.2
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 7.9e-09 63.5 46 73.9
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 7.9e-09 63.5 81 43.2
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.0e-08 63.2 73 49.3
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.5e-07 59.3 72 44.4
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 9.7e-07 56.6 72 44.4
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 3.7e-06 54.7 76 46.1


User provided reference genes

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