Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0158100 Rhododendron simsii HOM05D002712 ORTHO05D003032 5.8e-49 197.2 98 100.0
AUR62039180 Chenopodium quinoa HOM05D002712 ORTHO05D003032 2.6e-20 102.1 58 82.8
Nn6g33771 Nelumbo nucifera HOM05D002712 ORTHO05D003032 1.7e-19 99.4 58 77.6
EL10Ac2g03315 Beta vulgaris HOM05D002712 ORTHO05D003032 2.4e-18 95.5 58 75.9
vmacro07444 Vaccinium macrocarpon HOM05D002712 ORTHO05D003032 5.5e-15 84.3 55 65.5
ClCG04G010140 Citrullus lanatus HOM05D002712 ORTHO05D003032 7.2e-15 84.0 54 66.7
Pp3c19_22560 Physcomitrium patens HOM05D002712 ORTHO05D003032 6.1e-14 80.9 57 64.9
SGA_v2.0_scaffold184G39983 Striga asiatica HOM05D002712 ORTHO05D003032 1.4e-13 79.7 55 65.5
Lj5g0021688 Lotus japonicus HOM05D002712 ORTHO05D003032 3.0e-13 78.6 54 64.8
SEGI_19748 Sequoiadendron giganteum HOM05D002712 ORTHO05D003032 3.0e-13 78.6 54 64.8
SMO117G0043 Selaginella moellendorffii HOM05D002712 ORTHO05D003032 5.7e-12 74.3 46 69.6
Mapoly0127s0045 Marchantia polymorpha HOM05D002712 ORTHO05D003032 3.7e-11 71.6 60 58.3
Pp3c2_8420 Physcomitrium patens HOM05D002712 ORTHO05D003032 6.3e-11 70.9 36 83.3
HPP92_014642 Vanilla planifolia HOM05D002712 ORTHO05D003032 2.0e-09 65.9 58 56.9
DCAR_009463 Daucus carota HOM05D002712 ORTHO05D003032 7.7e-09 63.9 58 56.9
ATR0665G252 Amborella trichopoda HOM05D002712 ORTHO05D003032 1.0e-08 63.5 58 53.4
Ah.16g106080 Amaranthus hybridus HOM05D002712 ORTHO05D003032 1.3e-08 63.2 36 80.6
SMO164G0241 Selaginella moellendorffii HOM05D002712 ORTHO05D376026 5.0e-08 61.2 39 66.7
Lalb_Chr02g0154811 Lupinus albus HOM05D002712 ORTHO05D003032 6.5e-08 60.8 55 52.7
Actinidia31886 Actinidia chinensis HOM05D002712 ORTHO05D003032 1.1e-07 60.1 56 53.6
Actinidia24773 Actinidia chinensis HOM05D002712 ORTHO05D003032 1.5e-07 59.7 56 53.6
CiPaw.07G183400 Carya illinoinensis HOM05D002712 ORTHO05D003032 1.5e-07 59.7 58 53.4
TAR375G0069 Trochodendron aralioides HOM05D002712 ORTHO05D003032 1.5e-07 59.7 45 71.1
Rhsim03G0158800 Rhododendron simsii HOM05D002712 ORTHO05D003032 2.5e-07 58.9 58 56.9
vmacro06847 Vaccinium macrocarpon HOM05D002712 ORTHO05D003032 2.5e-07 58.9 58 56.9
CBR_g21203 Chara braunii HOM05D002712 ORTHO05D003032 4.2e-07 58.2 55 52.7
Migut.F01209 Erythranthe guttata HOM05D002712 ORTHO05D003032 5.5e-07 57.8 58 53.4
CiPaw.08G042600 Carya illinoinensis HOM05D002712 ORTHO05D003032 7.2e-07 57.4 58 55.2
Hund12419 Selenicereus undatus HOM05D002712 ORTHO05D003032 9.4e-07 57.0 58 55.2
MSTRG.8401 Avicennia marina HOM05D002712 ORTHO05D003032 1.2e-06 56.6 58 53.4
Hma1.2p1_0502F.1_g167860 Hydrangea macrophylla HOM05D002712 ORTHO05D003032 1.2e-06 56.6 58 53.4
Hma1.2p1_2119F.1_g314390 Hydrangea macrophylla HOM05D002712 ORTHO05D003032 1.2e-06 56.6 58 53.4
DCAR_020166 Daucus carota HOM05D002712 ORTHO05D003032 1.6e-06 56.2 58 51.7
Lj8A48T41 Lonicera japonica HOM05D002712 ORTHO05D003032 1.6e-06 56.2 58 53.4
Actinidia31658 Actinidia chinensis HOM05D002712 ORTHO05D003032 2.1e-06 55.8 58 53.4
Cfa013600 Carpinus fangiana HOM05D002712 ORTHO05D003032 2.1e-06 55.8 58 53.4
Ca_00240_v3 Cicer arietinum L. HOM05D002712 ORTHO05D003032 2.1e-06 55.8 58 53.4
Haze_22222 Corylus avellana HOM05D002712 ORTHO05D003032 2.1e-06 55.8 58 53.4
Glyma.09G233300 Glycine max HOM05D002712 ORTHO05D003032 2.1e-06 55.8 58 53.4
Glyma.12G003500 Glycine max HOM05D002712 ORTHO05D003032 2.1e-06 55.8 58 53.4
TPR.G15132 Trifolium pratense HOM05D002712 ORTHO05D003032 2.1e-06 55.8 58 53.4
Dinv16882 Davidia involucrata HOM05D002712 ORTHO05D003032 2.7e-06 55.5 33 78.8
Dinv16883 Davidia involucrata HOM05D002712 ORTHO05D003032 2.7e-06 55.5 33 78.8
Medtr4g035650 Medicago truncatula HOM05D002712 ORTHO05D003032 2.7e-06 55.5 58 53.4
MCO05G099 Micromonas commoda HOM05D002712 ORTHO05D003032 2.7e-06 55.5 33 69.7
TAR629G1116 Trochodendron aralioides HOM05D002712 ORTHO05D003032 2.7e-06 55.5 58 51.7
Lj3g0014569 Lotus japonicus HOM05D002712 ORTHO05D003032 3.6e-06 55.1 58 53.4
PGR042G3357 Punica granatum HOM05D002712 ORTHO05D003032 3.6e-06 55.1 58 51.7
SalBow3G0611 Salvia bowleyana HOM05D002712 ORTHO05D003032 3.6e-06 55.1 58 53.4
arahy.Tifrunner.gnm1.ann1.L1TS6G Arachis hypogaea HOM05D002712 ORTHO05D003032 4.7e-06 54.7 58 53.4
Ciclev10032174m.g Citrus clementina HOM05D002712 ORTHO05D003032 4.7e-06 54.7 58 53.4
QL09p027448 Quercus lobata HOM05D002712 ORTHO05D003032 4.7e-06 54.7 58 51.7
VMungo1127G2313 Vigna mungo HOM05D002712 ORTHO05D003032 4.7e-06 54.7 58 51.7
Cc00_g24330 Coffea canephora HOM05D002712 ORTHO05D003032 6.1e-06 54.3 58 51.7
THA.LOC104801670 Tarenaya hassleriana HOM05D002712 ORTHO05D003032 6.1e-06 54.3 58 51.7


User provided reference genes

Program Settings