Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_MTg0499231 Rosa chinensis HOM05D010940 ORTHO05D020245 2.4e-38 161.8 87 100.0
CSS0025600 Camellia sinensis var. sinensis HOM05D010940 ORTHO05D020245 9.2e-22 106.7 72 76.4
Lsat_1_v5_gn_0_38260 Lactuca sativa HOM05D010940 ORTHO05D009928 2.6e-16 88.6 83 62.7
Lsat_1_v5_gn_6_64680 Lactuca sativa HOM05D010940 ORTHO05D009928 2.6e-16 88.6 83 62.7
Lsat_1_v5_gn_8_11761 Lactuca sativa HOM05D010940 ORTHO05D009928 2.6e-16 88.6 83 62.7
Lsat_1_v5_gn_7_67861 Lactuca sativa HOM05D010940 ORTHO05D009928 5.8e-16 87.4 83 61.4
DCAR_022727 Daucus carota HOM05D010940 ORTHO05D009928 9.2e-14 80.1 81 58.0
ECA039G0024 Erigeron canadensis HOM05D008490 ORTHO05D010725 1.9e-11 72.4 73 57.5
Sopen00g002760 Solanum pennellii HOM05D010940 ORTHO05D009928 4.3e-11 71.2 73 56.2
Nitab4.5_0010736g0020 Nicotiana tabacum HOM05D017454 ORTHO05D009928 2.8e-10 68.6 81 49.4
Ca_20321_v3 Cicer arietinum L. HOM05D025245 ORTHO05D020245 3.6e-10 68.2 74 54.1
ECA233G2727 Erigeron canadensis HOM05D010940 ORTHO05D009928 3.6e-10 68.2 73 54.8
Solyc00g210860.1 Solanum lycopersicum HOM05D010940 ORTHO05D009928 4.8e-10 67.8 84 44.0
Solyc08g036550.1 Solanum lycopersicum HOM05D010940 ORTHO05D009928 4.8e-10 67.8 84 44.0
PGSC0003DMG400012079 Solanum tuberosum HOM05D010940 ORTHO05D009928 8.1e-10 67.0 58 63.8
Nitab4.5_0000028g0250 Nicotiana tabacum HOM05D006493 ORTHO05D009864 1.8e-09 65.9 67 56.7
CDE02G0269 Ceratophyllum demersum HOM05D010940 ORTHO05D009928 3.1e-09 65.1 56 64.3
Gorai.001G159900 Gossypium raimondii HOM05D010940 ORTHO05D009928 5.3e-09 64.3 82 51.2
Ah.10g027860 Amaranthus hybridus HOM05D000445 ORTHO05D009928 2.6e-08 62.0 57 64.9
Ah.10g028320 Amaranthus hybridus HOM05D000445 ORTHO05D009928 2.6e-08 62.0 57 64.9
Medtr0082s0150 Medicago truncatula HOM05D025245 ORTHO05D020245 1.9e-06 55.8 63 50.8
Medtr8g059770 Medicago truncatula HOM05D025245 ORTHO05D020245 1.9e-06 55.8 63 50.8
Peaxi162Scf01132g00318 Petunia axillaris HOM05D017454 ORTHO05D009928 1.9e-06 55.8 73 46.6
ATR0273G001 Amborella trichopoda HOM05D017454 ORTHO05D009928 2.4e-06 55.5 83 38.6
Lalb_Chr08g0235981 Lupinus albus HOM05D025245 ORTHO05D020245 3.2e-06 55.1 49 61.2
Nn1g10073 Nelumbo nucifera HOM05D008283 ORTHO05D009928 9.3e-06 53.5 81 35.8


User provided reference genes

Program Settings