Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0306231 Rosa chinensis HOM05D002813 ORTHO05D003203 2.6e-155 552.0 273 100.0
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 3.8e-29 132.9 150 50.7
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.4e-29 131.7 151 50.3
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 4.6e-27 125.9 125 53.6
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-26 122.9 136 51.5
FvH4_6g06400 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-25 121.3 136 51.5
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 2.5e-25 120.2 125 56.0
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 9.6e-25 118.2 123 53.7
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-24 117.9 119 60.5
FAN04G1304 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-24 115.9 122 50.8
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 1.1e-23 114.8 124 49.2
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-23 113.6 124 54.8
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-22 110.9 117 55.6
FAN14G0433 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-22 110.9 117 55.6
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 2.6e-22 110.2 125 49.6
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 1.7e-21 107.5 124 46.8
FAN14G1246 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-21 107.5 161 40.4
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-21 107.5 152 42.1
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.2e-21 107.1 124 46.8
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 2.2e-21 107.1 119 50.4
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 2.9e-21 106.7 152 42.1
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.8e-21 106.3 152 41.4
FvH4_2g35530 Fragaria vesca HOM05D002813 ORTHO05D003203 4.9e-21 105.9 90 62.2
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.9e-21 105.9 90 62.2
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 6.5e-21 105.5 113 55.8
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 8.4e-21 105.1 120 49.2
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 8.4e-21 105.1 123 50.4
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-20 103.2 125 48.8
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 3.2e-20 103.2 125 47.2
Thecc.09G045300 Theobroma cacao HOM05D002813 ORTHO05D003203 4.2e-20 102.8 124 46.0
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 5.5e-20 102.4 121 49.6
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 7.1e-20 102.1 118 49.2
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.3e-20 101.7 115 47.8
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-19 100.9 115 47.8
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-19 100.9 115 47.8
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 1.6e-19 100.9 122 42.6
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.1e-19 100.5 124 46.0
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 2.1e-19 100.5 127 44.9
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-19 100.1 113 53.1
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.7e-19 100.1 124 46.0
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 3.5e-19 99.8 115 47.8
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 4.6e-19 99.4 124 45.2
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 6.0e-19 99.0 122 44.3
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-18 98.2 124 47.6
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 1.3e-18 97.8 125 45.6
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 8.7e-18 95.1 121 44.6
FAN09G1972 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-17 94.7 95 52.6
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-17 94.0 115 46.1
FAN18G3812 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-17 92.0 111 48.6
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 7.4e-17 92.0 122 43.4
FAN14G4337 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.6e-17 91.7 133 41.4
FAN21G1333 Fragaria x ananassa HOM05D000259 ORTHO05D008185 9.6e-17 91.7 125 46.4
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 1.3e-16 91.3 120 44.2
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 1.3e-16 91.3 109 47.7
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 1.6e-16 90.9 121 44.6
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 2.1e-16 90.5 123 43.1
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 3.7e-16 89.7 132 43.9
FAN10G2587 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-16 89.7 143 43.4
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 4.8e-16 89.4 124 43.5
FAN01G0062 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-16 89.0 148 42.6
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 8.2e-16 88.6 109 50.5
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 8.2e-16 88.6 124 42.7
Solyc08g066630.2 Solanum lycopersicum HOM05D002813 ORTHO05D003203 8.2e-16 88.6 123 41.5
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 8.2e-16 88.6 123 41.5
FAN06G4596 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-15 88.2 144 41.7
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-15 88.2 111 47.7
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-15 87.4 108 49.1
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-15 87.4 114 47.4
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-15 87.4 124 42.7
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 2.4e-15 87.0 109 48.6
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-15 87.0 109 48.6
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 2.4e-15 87.0 123 41.5
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 4.1e-15 86.3 109 48.6
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-15 86.3 114 45.6
FAN24G1750 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-15 86.3 109 48.6
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 5.3e-15 85.9 116 43.1
FAN28G0350 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.9e-15 85.5 109 45.9
CiPaw.16G053300 Carya illinoinensis HOM05D002813 ORTHO05D003203 9.0e-15 85.1 109 46.8
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.0e-15 85.1 122 42.6
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.0e-15 85.1 114 45.6
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.0e-15 85.1 109 50.5
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.0e-15 85.1 114 45.6
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-14 84.7 114 45.6
FAN06G1567 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-14 84.3 116 47.4
FAN05G2846 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-14 84.0 84 52.4
FAN20G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-14 84.0 110 49.1
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 2.0e-14 84.0 123 39.8
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-14 82.8 114 45.6
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.8e-14 82.4 121 40.5
FvH4_3g21760 Fragaria vesca HOM05D002813 ORTHO05D003203 7.6e-14 82.0 130 42.3
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.6e-14 82.0 118 42.4
FAN10G3741 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.6e-14 82.0 115 45.2
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-13 81.6 111 46.8
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-13 81.6 111 46.8
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-13 81.3 114 45.6
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-13 80.9 124 39.5
FvH4_6g10172 Fragaria vesca HOM05D002813 ORTHO05D003203 2.2e-13 80.5 115 44.3
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-13 80.1 118 41.5
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 2.9e-13 80.1 119 41.2
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 3.8e-13 79.7 121 38.8
Peaxi162Scf00227g00722 Petunia axillaris HOM05D002813 ORTHO05D003203 3.8e-13 79.7 90 48.9
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 5.0e-13 79.3 120 40.0
FvH4_5g12210 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-12 78.2 117 40.2
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-12 77.8 120 42.5
FAN15G1647 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-12 77.8 49 75.5
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 1.9e-12 77.4 120 43.3
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-12 77.4 120 43.3
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-12 77.0 118 40.7
FAN06G5037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-12 76.6 94 47.9
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-12 75.9 116 38.8
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-12 75.9 116 38.8
FAN27G3291 Fragaria x ananassa HOM05D007761 ORTHO05D003203 5.5e-12 75.9 112 42.9
FvH4_5g12180 Fragaria vesca HOM05D002813 ORTHO05D003203 7.1e-12 75.5 118 38.1
SEGI_37199 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 9.3e-12 75.1 155 34.8
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-11 74.7 118 40.7
FAN18G0945 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 74.7 100 41.0
FAN18G0957 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 74.7 118 40.7
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.6e-11 72.8 121 41.3
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.1e-11 72.4 76 52.6
FAN03G2494 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.9e-11 72.0 114 42.1
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-10 71.6 107 43.0
FAN16G2005 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-10 70.9 105 45.7
FAN04G1334 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-10 70.5 111 37.8
FAN10G3663 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-10 70.1 89 46.1
ECA248G1211 Erigeron canadensis HOM05D002813 ORTHO05D003203 3.9e-10 69.7 133 37.6
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 3.9e-10 69.7 133 35.3
HanXRQChr12g0371751 Helianthus annuus HOM05D002813 ORTHO05D003203 3.9e-10 69.7 133 37.6
Lsat_1_v5_gn_6_23140 Lactuca sativa HOM05D002813 ORTHO05D003203 5.1e-10 69.3 120 38.3
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 1.5e-09 67.8 133 35.3
FAN26G1940 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-09 67.8 88 42.0
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-09 67.4 134 39.6
FAN17G1816 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-09 67.4 120 40.8
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-09 67.4 134 35.8
FAN11G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-09 67.0 133 36.8
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-09 67.0 133 34.6
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 3.3e-09 66.6 134 38.1
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 4.3e-09 66.2 132 34.8
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 4.3e-09 66.2 127 30.7
FAN20G2689 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-09 65.5 77 50.6
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-08 64.7 134 38.8
FAN25G3603 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-08 64.7 92 47.8
HanXRQChr12g0371771 Helianthus annuus HOM05D002813 ORTHO05D003203 1.3e-08 64.7 119 38.7
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-08 64.3 144 32.6
FAN17G0649 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-08 63.2 132 33.3
RcHm_v2.0_Chr6g0307011 Rosa chinensis HOM05D002813 ORTHO05D003203 3.7e-08 63.2 77 48.1
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-08 62.8 144 32.6
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.3e-08 62.4 134 37.3
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.2e-08 62.0 144 32.6
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-07 61.6 91 42.9
FAN11G3977 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-07 61.2 114 39.5
FAN21G3206 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-07 61.2 105 41.0
FAN25G3196 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-07 61.2 135 32.6
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 3.1e-07 60.1 133 34.6
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 5.3e-07 59.3 169 30.2
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.9e-07 58.9 121 33.1
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-06 58.2 122 32.0
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-06 58.2 122 32.0
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-06 58.2 122 32.0
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 2.0e-06 57.4 67 41.8
FAN08G0206 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-06 57.4 110 32.7
ECA233G4000 Erigeron canadensis HOM05D003085 ORTHO05D003597 2.6e-06 57.0 124 33.1
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 3.4e-06 56.6 125 32.0
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-06 55.8 121 31.4


User provided reference genes

Program Settings