Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0003191 Rosa chinensis HOM05D007941 ORTHO05D010050 0.0e+00 1362.8 689 100.0
FvH4_3g02100 Fragaria vesca HOM05D007941 ORTHO05D010050 0.0e+00 1167.9 668 88.0
FAN25G1443 Fragaria x ananassa HOM05D007941 ORTHO05D010050 0.0e+00 1132.9 694 83.1
Prupe.4G021200 Prunus persica HOM05D007941 ORTHO05D010050 2.8e-283 978.4 709 73.9
MD05G1345700 Malus domestica HOM05D007941 ORTHO05D010050 1.9e-271 939.1 706 70.4
MD10G1321100 Malus domestica HOM05D007941 ORTHO05D010050 7.8e-265 917.1 708 70.2
Cfa000224 Carpinus fangiana HOM05D007941 ORTHO05D010050 2.5e-231 805.8 712 63.1
Haze_06797 Corylus avellana HOM05D007941 ORTHO05D010050 9.0e-229 797.3 718 61.7
QL05p073215 Quercus lobata HOM05D007941 ORTHO05D010050 3.2e-226 788.9 721 61.6
Thecc.06G220000 Theobroma cacao HOM05D007941 ORTHO05D010050 3.6e-209 732.3 715 59.0
Manes.16G007400 Manihot esculenta HOM05D007941 ORTHO05D010050 3.7e-206 722.2 709 56.6
CANSAT56G1781 Cannabis sativa HOM05D007941 ORTHO05D010050 1.6e-201 706.8 726 59.0
TWI38G0160 Tripterygium wilfordii HOM05D007941 ORTHO05D010050 1.8e-200 703.4 718 55.8
Atru.chr10.2217 Acer truncatum HOM05D007941 ORTHO05D010050 2.6e-199 699.5 722 56.1
Potri.004G015401 Populus trichocarpa HOM05D007941 ORTHO05D010050 3.8e-195 685.6 699 57.1
TAR627G0026 Trochodendron aralioides HOM05D007941 ORTHO05D010050 3.9e-192 675.6 731 55.1
Ciclev10017854m.g Citrus clementina HOM05D007941 ORTHO05D010050 5.7e-191 671.8 703 55.3
Gorai.011G014100 Gossypium raimondii HOM05D007941 ORTHO05D010050 2.2e-190 669.8 703 54.6
Nn1g07127 Nelumbo nucifera HOM05D007941 ORTHO05D010050 7.0e-189 664.8 738 54.3
Gohir.D10G012450 Gossypium hirsutum HOM05D007941 ORTHO05D010050 9.1e-189 664.5 703 54.2
COL.COLO4_31770 Corchorus olitorius HOM05D007941 ORTHO05D010050 1.2e-188 664.1 705 54.9
Sabra04G0007600 Salix brachista HOM05D007941 ORTHO05D010050 1.6e-188 663.7 707 55.0
FAN21G2241 Fragaria x ananassa HOM05D007941 ORTHO05D010050 8.8e-184 647.9 343 92.1
Gohir.A10G012680 Gossypium hirsutum HOM05D007941 ORTHO05D010050 1.2e-180 637.5 703 52.9
CiPaw.09G091700 Carya illinoinensis HOM05D007941 ORTHO05D010050 2.7e-180 636.3 639 58.8
Phvul.003G078500 Phaseolus vulgaris HOM05D007941 ORTHO05D010050 1.5e-178 630.6 706 52.3
Glyma.17G013700 Glycine max HOM05D007941 ORTHO05D010050 1.0e-176 624.4 699 52.6
Cpa.g.sc152.13 Carica papaya HOM05D007941 ORTHO05D010050 4.0e-176 622.5 720 52.4
VMungo1215G2837 Vigna mungo HOM05D007941 ORTHO05D010050 1.6e-172 610.5 700 51.4
Actinidia26916 Actinidia chinensis HOM05D007941 ORTHO05D010050 2.9e-171 606.3 702 52.0
Lj4g0020812 Lotus japonicus HOM05D007941 ORTHO05D010050 6.5e-171 605.1 693 51.8
PSO832G2769 Papaver somniferum HOM05D007941 ORTHO05D010050 3.1e-165 586.3 705 50.9
Sed0010816 Sechium edule HOM05D007941 ORTHO05D010050 2.9e-163 579.7 708 49.9
Cc09_g01710 Coffea canephora HOM05D007941 ORTHO05D010050 4.0e-160 569.3 717 49.8
arahy.Tifrunner.gnm1.ann1.CCWF18 Arachis hypogaea HOM05D007941 ORTHO05D010050 3.4e-159 566.2 686 50.9
arahy.Tifrunner.gnm1.ann1.N60BY5 Arachis hypogaea HOM05D007941 ORTHO05D010050 7.8e-156 555.1 688 49.3
CsaV3_1G010790 Cucumis sativus L. HOM05D007941 ORTHO05D010050 5.0e-155 552.4 695 48.1
ClCG03G004750 Citrullus lanatus HOM05D007941 ORTHO05D010050 4.7e-153 545.8 694 49.1
Lj1C1230T3 Lonicera japonica HOM05D007941 ORTHO05D010050 4.7e-153 545.8 566 54.4
Ca_21085_v3 Cicer arietinum L. HOM05D007941 ORTHO05D010050 1.7e-150 537.3 687 49.1
Nitab4.5_0012670g0020 Nicotiana tabacum HOM05D007941 ORTHO05D010050 1.3e-147 527.7 681 49.0
MELO3C002458.2 Cucumis melo HOM05D007941 ORTHO05D010050 4.4e-143 512.7 710 46.6
Solyc03g031660.1 Solanum lycopersicum HOM05D007941 ORTHO05D010050 2.9e-142 510.0 686 47.1
Peaxi162Scf00502g00214 Petunia axillaris HOM05D007941 ORTHO05D010050 1.1e-141 508.1 698 46.7
TPR.G37125 Trifolium pratense HOM05D007941 ORTHO05D010050 7.1e-141 505.4 810 42.2
Sopen03g005520 Solanum pennellii HOM05D007941 ORTHO05D010050 1.6e-140 504.2 686 47.2
GSVIVG01012729001 Vitis vinifera HOM05D007941 ORTHO05D010050 2.6e-135 486.9 423 63.6
CiPaw.09G091500 Carya illinoinensis HOM05D007941 ORTHO05D010050 2.1e-129 467.2 421 62.9
Dinv13890 Davidia involucrata HOM05D007941 ORTHO05D010050 3.6e-129 466.5 690 45.4
PGR004G0641 Punica granatum HOM05D007941 ORTHO05D010050 1.4e-128 464.5 707 45.3
Nn1g03523 Nelumbo nucifera HOM05D007941 ORTHO05D010050 8.9e-128 461.8 379 64.4
Nitab4.5_0007864g0050 Nicotiana tabacum HOM05D007941 ORTHO05D010050 4.4e-127 459.5 673 45.0
CDE05G3547 Ceratophyllum demersum HOM05D007941 ORTHO05D010050 4.2e-117 426.4 469 53.9
AUR62012706 Chenopodium quinoa HOM05D007941 ORTHO05D010050 4.6e-116 422.9 570 46.0
EL10Ac8g20054 Beta vulgaris HOM05D007941 ORTHO05D010050 7.4e-114 415.6 672 43.5
Medtr4g132080 Medicago truncatula HOM05D007941 ORTHO05D010050 2.3e-107 394.0 472 48.5
Hma1.2p1_0749F.1_g212520 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 4.8e-105 386.3 207 87.9
Hma1.2p1_0749F.1_g212543 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 4.8e-105 386.3 207 87.9
Mapoly0124s0009 Marchantia polymorpha HOM05D007941 ORTHO05D010050 2.3e-99 367.5 402 52.5
Pp3c25_7620 Physcomitrium patens HOM05D007941 ORTHO05D010050 2.9e-94 350.5 632 41.0
FAN21G0178 Fragaria x ananassa HOM05D007941 ORTHO05D010050 1.9e-69 268.1 181 79.0
MBI02_g07163_MAGBIO Magnolia biondii HOM05D007941 ORTHO05D010050 4.0e-59 233.8 702 31.8
Glyma.07G260250 Glycine max HOM05D007941 ORTHO05D010050 3.6e-44 184.1 367 39.2
SEGI_08485 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 1.5e-42 178.7 296 43.6
Dinv20048 Davidia involucrata HOM05D007941 ORTHO05D010050 2.0e-42 178.3 256 49.2
Dinv20049 Davidia involucrata HOM05D007941 ORTHO05D010050 3.2e-40 171.0 212 49.5
AUR62021948 Chenopodium quinoa HOM05D007941 ORTHO05D010050 4.1e-40 170.6 258 43.4
AUR62021949 Chenopodium quinoa HOM05D007941 ORTHO05D010050 3.9e-30 137.5 310 34.8
SEGI_17062 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 3.9e-30 137.5 70 85.7
SEGI_18097 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 7.5e-26 123.2 311 34.4
ATR0794G083 Amborella trichopoda HOM05D007941 ORTHO05D010050 1.3e-22 112.5 245 38.8
ATR0794G095 Amborella trichopoda HOM05D007941 ORTHO05D010050 2.9e-17 94.7 176 42.0
Nn1g03524 Nelumbo nucifera HOM05D007941 ORTHO05D010050 5.1e-14 84.0 110 50.9
PSO210G6634 Papaver somniferum HOM05D007941 ORTHO05D010050 2.9e-09 68.2 121 38.0
SEGI_12080 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 3.2e-08 64.7 143 34.3
PGSC0003DMG400005076 Solanum tuberosum HOM05D007941 ORTHO05D010050 1.0e-06 59.7 189 33.3
Medtr4g132090 Medicago truncatula HOM05D007941 ORTHO05D010050 1.7e-06 58.9 144 31.9


User provided reference genes

Program Settings