Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0160481 Rosa chinensis HOM05D007657 ORTHO05D009471 5.8e-164 580.9 304 100.0
FAN14G5828 Fragaria x ananassa HOM05D007657 ORTHO05D009471 2.1e-97 359.8 316 69.6
FvH4_6g43750 Fragaria vesca HOM05D007657 ORTHO05D009471 5.6e-90 335.1 285 70.5
FAN09G3022 Fragaria x ananassa HOM05D007657 ORTHO05D009471 8.0e-89 331.3 297 67.7
FAN02G3547 Fragaria x ananassa HOM05D007657 ORTHO05D009471 4.4e-87 325.5 293 67.6
FAN05G3329 Fragaria x ananassa HOM05D007657 ORTHO05D009471 6.8e-72 275.0 302 60.9
FvH4_1g29760 Fragaria vesca HOM05D007657 ORTHO05D009471 1.3e-38 164.5 162 64.2
FAN19G0836 Fragaria x ananassa HOM05D007657 ORTHO05D009471 2.9e-38 163.3 162 63.6
Sed0004603 Sechium edule HOM05D007657 ORTHO05D009471 1.9e-34 150.6 274 44.5
Lj3g0008282 Lotus japonicus HOM05D007657 ORTHO05D009471 1.3e-30 137.9 251 40.6
Psat0s3329g0040 Pisum sativum HOM05D007657 ORTHO05D009471 1.3e-30 137.9 246 42.3
Prupe.3G222500 Prunus persica HOM05D007657 ORTHO05D009471 3.8e-30 136.3 247 41.7
VMungo1080G1905 Vigna mungo HOM05D007657 ORTHO05D009471 9.4e-29 131.7 244 41.4
Ca_01565_v3 Cicer arietinum L. HOM05D007657 ORTHO05D009471 2.7e-28 130.2 239 41.4
arahy.Tifrunner.gnm1.ann1.X70W6B Arachis hypogaea HOM05D007657 ORTHO05D009471 3.6e-28 129.8 197 46.7
Thecc.02G164200 Theobroma cacao HOM05D007657 ORTHO05D009471 1.8e-27 127.5 265 36.2
Medtr2g089070 Medicago truncatula HOM05D007657 ORTHO05D009471 3.0e-27 126.7 185 42.2
Gohir.D02G186500 Gossypium hirsutum HOM05D007657 ORTHO05D009471 3.9e-27 126.3 180 46.7
Oeu034340.1 Olea europaea HOM05D007657 ORTHO05D009471 6.7e-27 125.6 282 37.9
Hma1.2p1_2477F.1_g322870 Hydrangea macrophylla HOM05D007657 ORTHO05D009471 2.0e-26 124.0 227 39.2
MD17G1091100 Malus domestica HOM05D007657 ORTHO05D009471 3.3e-26 123.2 269 36.1
Dinv18547 Davidia involucrata HOM05D007657 ORTHO05D009471 7.4e-26 122.1 252 40.5
ClCG02G001620 Citrullus lanatus HOM05D007657 ORTHO05D009471 9.7e-26 121.7 231 39.8
MBI18_g45174_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 1.3e-25 121.3 185 44.3
Gohir.A03G163000 Gossypium hirsutum HOM05D007657 ORTHO05D009471 1.7e-25 120.9 287 36.2
CiPaw.03G164200 Carya illinoinensis HOM05D007657 ORTHO05D009471 2.8e-25 120.2 216 41.2
Cfa014460 Carpinus fangiana HOM05D007657 ORTHO05D009471 3.7e-25 119.8 227 42.7
Gorai.005G208700 Gossypium raimondii HOM05D007657 ORTHO05D009471 3.7e-25 119.8 180 45.6
MELO3C018792.2 Cucumis melo HOM05D007657 ORTHO05D009471 4.8e-25 119.4 146 54.1
TWI18G0648 Tripterygium wilfordii HOM05D007657 ORTHO05D009471 6.3e-25 119.0 283 36.7
Cpa.g.sc8.253 Carica papaya HOM05D007657 ORTHO05D009471 3.1e-24 116.7 243 37.9
Duzib052G0340 Durio zibethinus HOM05D007657 ORTHO05D009471 3.1e-24 116.7 282 35.1
CsaV3_7G003870 Cucumis sativus L. HOM05D007657 ORTHO05D009471 5.3e-24 115.9 136 54.4
Glyma.12G196900 Glycine max HOM05D007657 ORTHO05D009471 9.1e-24 115.2 152 51.3
Phvul.005G112100 Phaseolus vulgaris HOM05D007657 ORTHO05D009471 9.1e-24 115.2 244 37.7
Duzib248G0741 Durio zibethinus HOM05D007657 ORTHO05D009471 2.0e-23 114.0 160 45.6
Nn1g03743 Nelumbo nucifera HOM05D020747 ORTHO05D009471 2.6e-23 113.6 144 49.3
HanXRQChr15g0479591 Helianthus annuus HOM05D007657 ORTHO05D009471 5.9e-23 112.5 182 40.7
CAN.G86.24 Capsicum annuum HOM05D007657 ORTHO05D009471 7.7e-23 112.1 174 42.5
MBI18_g21102_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 7.7e-23 112.1 187 42.2
Rhsim04G0057500 Rhododendron simsii HOM05D007657 ORTHO05D009471 1.0e-22 111.7 218 40.4
MBI18_g21101_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 1.3e-22 111.3 181 44.2
TPR.G30798 Trifolium pratense HOM05D007657 ORTHO05D009471 1.7e-22 110.9 126 51.6
Atru.chr6.3119 Acer truncatum HOM05D007657 ORTHO05D009471 1.4e-21 107.8 220 40.5
PGSC0003DMG400026164 Solanum tuberosum HOM05D007657 ORTHO05D009471 2.5e-21 107.1 186 40.3
COL.COLO4_13025 Corchorus olitorius HOM05D007657 ORTHO05D009471 7.2e-21 105.5 214 38.3
Solyc07g052930.3 Solanum lycopersicum HOM05D007657 ORTHO05D009471 9.4e-21 105.1 128 48.4
Sopen07g026480 Solanum pennellii HOM05D007657 ORTHO05D009471 9.4e-21 105.1 128 48.4
Lalb_Chr14g0375601 Lupinus albus HOM05D007657 ORTHO05D009471 1.2e-20 104.8 140 46.4
Sc12g0002470 Simmondsia chinensis HOM05D007657 ORTHO05D009471 1.2e-20 104.8 190 39.5
CANSAT64G1489 Cannabis sativa HOM05D007657 ORTHO05D009471 1.6e-20 104.4 122 51.6
Lsat_1_v5_gn_3_43060 Lactuca sativa HOM05D007657 ORTHO05D009471 2.7e-20 103.6 149 42.3
Nitab4.5_0003429g0020 Nicotiana tabacum HOM05D007657 ORTHO05D009471 7.9e-20 102.1 189 38.6
SGA_v2.0_scaffold159G37602 Striga asiatica HOM05D007657 ORTHO05D009471 3.9e-19 99.8 195 36.9
Cc05_g05320 Coffea canephora HOM05D007657 ORTHO05D009471 6.7e-19 99.0 207 38.6
QL08p034229 Quercus lobata HOM05D007657 ORTHO05D009471 6.7e-19 99.0 276 33.7
Sp3g19920 Schrenkiella parvula HOM05D007657 ORTHO05D009471 6.7e-19 99.0 205 35.6
AT3G22100 Arabidopsis thaliana HOM05D007657 ORTHO05D009471 8.8e-19 98.6 178 37.6
Peaxi162Scf00007g01411 Petunia axillaris HOM05D007657 ORTHO05D009471 8.8e-19 98.6 180 37.8
HPP92_000868 Vanilla planifolia HOM05D007657 ORTHO05D009471 4.4e-18 96.3 255 36.1
SalBow1G6397 Salvia bowleyana HOM05D007657 ORTHO05D009471 7.4e-18 95.5 160 39.4
Aa31LG8G8650 Aethionema arabicum HOM05D007657 ORTHO05D009471 1.7e-17 94.4 194 36.1
Thhalv10021235m.g Eutrema salsugineum HOM05D007657 ORTHO05D009471 2.2e-17 94.0 224 36.2
THA.LOC104802534 Tarenaya hassleriana HOM05D007657 ORTHO05D009471 3.7e-17 93.2 206 34.0
Actinidia30501 Actinidia chinensis HOM05D007657 ORTHO05D009471 8.2e-17 92.0 163 44.8
unitig_62.g23194 Utricularia gibba HOM05D007657 ORTHO05D009471 4.1e-16 89.7 121 47.9
Aqoxy7G03995 Aquilegia oxysepala HOM05D007657 ORTHO05D009471 7.0e-16 89.0 141 40.4
AL3G36280 Arabidopsis lyrata HOM05D007657 ORTHO05D009471 7.0e-16 89.0 118 42.4
Carub.0003s2227 Capsella rubella HOM05D007657 ORTHO05D009471 9.1e-16 88.6 197 32.0
ATR0804G080 Amborella trichopoda HOM05D007657 ORTHO05D009471 1.6e-15 87.8 131 41.2
SGA_v2.0_scaffold4400G54479 Striga asiatica HOM05D007657 ORTHO05D009471 3.5e-15 86.7 122 43.4
Nn012s41456 Nelumbo nucifera HOM05D020747 ORTHO05D009471 1.0e-14 85.1 165 38.2
Nn1g02822 Nelumbo nucifera HOM05D020747 ORTHO05D009471 1.0e-14 85.1 123 43.9
CDE05G1372 Ceratophyllum demersum HOM05D007657 ORTHO05D009471 2.2e-14 84.0 121 38.8
BcaC05g28104 Brassica carinata HOM05D007657 ORTHO05D009471 8.5e-14 82.0 119 42.9
C05p41310 Brassica napus HOM05D007657 ORTHO05D009471 8.5e-14 82.0 119 42.9
BolC5t32872H Brassica oleracea HOM05D007657 ORTHO05D009471 8.5e-14 82.0 119 42.9
BcaB04g20544 Brassica carinata HOM05D007657 ORTHO05D009471 1.1e-13 81.6 185 33.0
BcaB06g26306 Brassica carinata HOM05D007657 ORTHO05D009471 1.1e-13 81.6 117 42.7
A05p26740 Brassica napus HOM05D007657 ORTHO05D009471 1.6e-12 77.8 110 42.7
BraA05t21556Z Brassica rapa HOM05D007657 ORTHO05D009471 4.7e-12 76.3 110 41.8
Psat7g073040 Pisum sativum HOM05D007657 ORTHO05D009471 1.8e-11 74.3 90 48.9
Nitab4.5_0001134g0150 Nicotiana tabacum HOM05D007657 ORTHO05D009471 4.4e-10 69.7 104 43.3
Psat7g073080 Pisum sativum HOM05D007657 ORTHO05D009471 9.7e-10 68.6 94 44.7
ATR0772G185 Amborella trichopoda HOM05D007657 ORTHO05D009471 6.3e-09 65.9 83 44.6
Migut.H01205 Erythranthe guttata HOM05D007657 ORTHO05D009471 1.8e-08 64.3 89 41.6
PGR042G0132 Punica granatum HOM05D007657 ORTHO05D009471 1.8e-08 64.3 77 46.8
Cfa019641 Carpinus fangiana HOM05D007657 ORTHO05D009471 9.1e-08 62.0 123 34.1
FAN22G0679 Fragaria x ananassa HOM05D007657 ORTHO05D009471 1.6e-07 61.2 43 79.1
Cfa021139 Carpinus fangiana HOM05D007657 ORTHO05D009471 3.5e-07 60.1 123 33.3
unitig_748.g7448 Utricularia gibba HOM05D000850 ORTHO05D000266 3.8e-06 56.6 66 45.5
BcaC09g50020 Brassica carinata HOM05D000850 ORTHO05D000266 5.0e-06 56.2 77 42.9
C01p29920 Brassica napus HOM05D000850 ORTHO05D000266 5.0e-06 56.2 77 42.9
BolC1t02935H Brassica oleracea HOM05D000850 ORTHO05D000266 5.0e-06 56.2 77 42.9
Hma1.2p1_0528F.1_g172990 Hydrangea macrophylla HOM05D000850 ORTHO05D000266 8.5e-06 55.5 91 40.7


User provided reference genes

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