Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0121531 Rosa chinensis HOM05D000013 ORTHO05D346118 1.0e-40 169.5 78 100.0
RcHm_v2.0_Chr5g0036211 Rosa chinensis HOM05D000013 ORTHO05D000011 7.0e-13 77.0 49 75.5
RcHm_v2.0_Chr5g0036341 Rosa chinensis HOM05D000013 ORTHO05D000011 7.0e-13 77.0 49 75.5
RcHm_v2.0_Chr5g0036331 Rosa chinensis HOM05D000013 ORTHO05D000011 2.3e-11 72.0 51 64.7
FvH4_3g21270 Fragaria vesca HOM05D000013 ORTHO05D000011 5.0e-11 70.9 51 60.8
FAN11G0665 Fragaria x ananassa HOM05D000013 ORTHO05D000011 5.0e-11 70.9 51 60.8
Prupe.4G193200 Prunus persica HOM05D000013 ORTHO05D000011 4.7e-09 64.3 49 63.3
RcHm_v2.0_Chr5g0059581 Rosa chinensis HOM05D000013 ORTHO05D000011 4.7e-09 64.3 49 61.2
Prupe.4G193300 Prunus persica HOM05D000013 ORTHO05D000011 1.0e-08 63.2 49 61.2
FAN25G3738 Fragaria x ananassa HOM05D005381 ORTHO05D006674 1.8e-08 62.4 49 59.2
FAN21G2500 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.2e-07 59.7 49 57.1
Prupe.4G193400 Prunus persica HOM05D000013 ORTHO05D000011 5.8e-07 57.4 37 67.6
MD11G1233600 Malus domestica HOM05D000013 ORTHO05D000011 9.8e-07 56.6 49 55.1
Prupe.4G193600 Prunus persica HOM05D000013 ORTHO05D000011 1.7e-06 55.8 49 49.0
Lj1C857T4 Lonicera japonica HOM05D000013 ORTHO05D000011 2.9e-06 55.1 48 50.0
MD03G1186100 Malus domestica HOM05D000013 ORTHO05D000011 2.9e-06 55.1 37 62.2
QL03p006025 Quercus lobata HOM05D000013 ORTHO05D000011 2.9e-06 55.1 48 52.1
QL04p064412 Quercus lobata HOM05D000013 ORTHO05D000011 2.9e-06 55.1 48 52.1
RcHm_v2.0_Chr5g0036351 Rosa chinensis HOM05D000013 ORTHO05D000011 4.9e-06 54.3 49 51.0
CSS0002433 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 6.4e-06 53.9 52 53.8
QL03p005954 Quercus lobata HOM05D000013 ORTHO05D000011 6.4e-06 53.9 36 63.9
QL04p064377 Quercus lobata HOM05D000013 ORTHO05D000646 8.3e-06 53.5 68 39.7


User provided reference genes

Program Settings