Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0341801 Rosa chinensis HOM05D010501 ORTHO05D000047 7.3e-98 360.5 179 100.0
RcHm_v2.0_Chr2g0138831 Rosa chinensis HOM05D010501 ORTHO05D000047 7.8e-84 313.9 182 86.8
RcHm_v2.0_Chr2g0141421 Rosa chinensis HOM05D010501 ORTHO05D000047 3.0e-83 312.0 182 85.7
RcHm_v2.0_Chr6g0294691 Rosa chinensis HOM05D010501 ORTHO05D000047 1.6e-81 306.2 182 85.2
RcHm_v2.0_Chr5g0010221 Rosa chinensis HOM05D000002 ORTHO05D000001 1.1e-61 240.4 138 86.2
RcHm_v2.0_Chr2g0113741 Rosa chinensis HOM05D010501 ORTHO05D000047 7.9e-60 234.2 139 82.0
FvH4_5g22281 Fragaria vesca HOM05D010501 ORTHO05D000047 2.0e-55 219.5 182 63.7
RcHm_v2.0_Chr3g0461531 Rosa chinensis HOM05D000002 ORTHO05D000001 2.4e-32 142.9 103 67.0
RcHm_v2.0_Chr7g0196171 Rosa chinensis HOM05D000002 ORTHO05D000001 7.0e-32 141.4 103 66.0
RcHm_v2.0_Chr3g0453371 Rosa chinensis HOM05D000002 ORTHO05D000001 6.5e-30 134.8 103 64.1
RcHm_v2.0_Chr2g0145281 Rosa chinensis HOM05D000002 ORTHO05D000047 1.3e-22 110.5 190 42.1
RcHm_v2.0_Chr3g0457401 Rosa chinensis HOM05D000002 ORTHO05D000047 1.3e-22 110.5 191 41.9
FvH4_3g16720 Fragaria vesca HOM05D000011 ORTHO05D000157 8.8e-19 97.8 73 65.8
RcHm_v2.0_Chr1g0361951 Rosa chinensis HOM05D000002 ORTHO05D000001 1.2e-15 87.4 52 86.5
FvH4_2g27292 Fragaria vesca HOM05D000002 ORTHO05D000047 3.2e-13 79.3 198 34.8
FvH4_4g15582 Fragaria vesca HOM05D021364 ORTHO05D020611 1.6e-12 77.0 129 38.8
RcHm_v2.0_Chr4g0387431 Rosa chinensis HOM05D001363 ORTHO05D000001 8.8e-11 71.2 163 35.0
RcHm_v2.0_Chr4g0388741 Rosa chinensis HOM05D010501 ORTHO05D000047 5.7e-10 68.6 62 56.5
RcHm_v2.0_Chr7g0237031 Rosa chinensis HOM05D010501 ORTHO05D346084 5.7e-10 68.6 42 81.0
RcHm_v2.0_Chr7g0239981 Rosa chinensis HOM05D010501 ORTHO05D348846 3.7e-09 65.9 42 76.2
RcHm_v2.0_Chr1g0339051 Rosa chinensis HOM05D000002 ORTHO05D000001 1.4e-08 63.9 152 30.9
RcHm_v2.0_Chr3g0448001 Rosa chinensis HOM05D010501 ORTHO05D000047 3.1e-08 62.8 36 83.3
FvH4_2g04952 Fragaria vesca HOM05D000002 ORTHO05D000047 4.5e-07 58.9 89 39.3
FvH4_3g19921 Fragaria vesca HOM05D021364 ORTHO05D020611 1.7e-06 57.0 152 32.2
COL.COLO4_11287 Corchorus olitorius HOM05D000028 ORTHO05D000701 6.6e-06 55.1 106 32.1


User provided reference genes

Program Settings