Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p050624 Quercus lobata HOM05D005026 ORTHO05D005981 1.7e-171 605.9 307 100.0
QL11p050879 Quercus lobata HOM05D005026 ORTHO05D005981 1.7e-171 605.9 307 100.0
Cfa005253 Carpinus fangiana HOM05D005026 ORTHO05D005981 3.7e-150 535.0 308 88.6
CiPaw.05G083000 Carya illinoinensis HOM05D005026 ORTHO05D005981 2.6e-143 512.3 309 85.1
Haze_02129 Corylus avellana HOM05D005026 ORTHO05D005981 4.5e-140 501.5 289 88.9
Prupe.8G166600 Prunus persica HOM05D005026 ORTHO05D005981 1.8e-128 463.0 308 76.6
Glyma.10G281500 Glycine max HOM05D005026 ORTHO05D005981 5.8e-127 458.0 314 75.5
Glyma.20G107700 Glycine max HOM05D005026 ORTHO05D005981 7.5e-127 457.6 313 75.4
CsaV3_2G016150 Cucumis sativus L. HOM05D005026 ORTHO05D005981 1.3e-126 456.8 315 75.9
ClCG02G011990 Citrullus lanatus HOM05D005026 ORTHO05D005981 8.3e-126 454.1 315 75.9
MELO3C020824.2 Cucumis melo HOM05D005026 ORTHO05D005981 1.4e-125 453.4 315 74.6
Potri.004G176200 Populus trichocarpa HOM05D005026 ORTHO05D005981 2.4e-125 452.6 309 77.3
arahy.Tifrunner.gnm1.ann1.Y470YU Arachis hypogaea HOM05D005026 ORTHO05D005981 4.1e-125 451.8 313 75.4
FvH4_2g15441 Fragaria vesca HOM05D005026 ORTHO05D005981 1.6e-124 449.9 311 74.9
FAN24G0982 Fragaria x ananassa HOM05D005026 ORTHO05D005981 1.6e-124 449.9 311 74.9
Lj5g0027913 Lotus japonicus HOM05D005026 ORTHO05D005981 1.6e-124 449.9 311 74.9
Sed0021554 Sechium edule HOM05D005026 ORTHO05D005981 1.6e-124 449.9 315 75.2
VMungo0720G0105 Vigna mungo HOM05D005026 ORTHO05D005981 2.7e-124 449.1 314 74.2
CSS0005811 Camellia sinensis var. sinensis HOM05D005026 ORTHO05D005981 3.5e-124 448.7 310 72.9
arahy.Tifrunner.gnm1.ann1.UBN13B Arachis hypogaea HOM05D005026 ORTHO05D005981 4.6e-124 448.4 313 75.1
GSVIVG01024009001 Vitis vinifera HOM05D005026 ORTHO05D005981 2.3e-123 446.0 313 73.2
RcHm_v2.0_Chr6g0278411 Rosa chinensis HOM05D005026 ORTHO05D005981 3.0e-123 445.7 311 74.0
Nn3g19196 Nelumbo nucifera HOM05D005026 ORTHO05D005981 1.1e-122 443.7 312 73.1
Phvul.007G019200 Phaseolus vulgaris HOM05D005026 ORTHO05D005981 1.9e-122 443.0 314 73.6
Sed0002674 Sechium edule HOM05D005026 ORTHO05D005981 1.9e-122 443.0 315 74.3
FAN15G3749 Fragaria x ananassa HOM05D005026 ORTHO05D005981 2.5e-122 442.6 311 73.6
PGR142G1000 Punica granatum HOM05D005026 ORTHO05D005981 5.6e-122 441.4 309 72.2
Ca_11210_v3 Cicer arietinum L. HOM05D005026 ORTHO05D005981 1.6e-121 439.9 311 73.0
Sabra04G0118300 Salix brachista HOM05D005026 ORTHO05D005981 2.1e-121 439.5 309 74.8
Atru.chr5.3373 Acer truncatum HOM05D005026 ORTHO05D005981 3.6e-121 438.7 309 73.1
Ciclev10028903m.g Citrus clementina HOM05D005026 ORTHO05D005981 3.6e-121 438.7 307 74.6
Lalb_Chr02g0143411 Lupinus albus HOM05D005026 ORTHO05D005981 4.7e-121 438.3 309 73.8
Thecc.02G058400 Theobroma cacao HOM05D005026 ORTHO05D005981 1.1e-120 437.2 309 73.8
vmacro17340 Vaccinium macrocarpon HOM05D005026 ORTHO05D005981 1.1e-120 437.2 310 72.3
Lalb_Chr06g0163661 Lupinus albus HOM05D005026 ORTHO05D005981 2.3e-120 436.0 312 72.8
Rhsim05G0054500 Rhododendron simsii HOM05D005026 ORTHO05D005981 6.8e-120 434.5 309 70.2
TAR629G1604 Trochodendron aralioides HOM05D005026 ORTHO05D005981 6.8e-120 434.5 312 73.1
Actinidia21465 Actinidia chinensis HOM05D005026 ORTHO05D005981 2.0e-119 433.0 310 71.0
CANSAT78G2332 Cannabis sativa HOM05D005026 ORTHO05D005981 3.4e-119 432.2 312 73.1
PGSC0003DMG400026715 Solanum tuberosum HOM05D005026 ORTHO05D005981 7.5e-119 431.0 314 72.3
Solyc10g055640.2 Solanum lycopersicum HOM05D005026 ORTHO05D005981 1.3e-118 430.3 314 72.3
Sopen10g025430 Solanum pennellii HOM05D005026 ORTHO05D005981 1.3e-118 430.3 314 72.3
Gohir.D01G160600 Gossypium hirsutum HOM05D005026 ORTHO05D005981 4.9e-118 428.3 309 72.5
Gorai.002G199000 Gossypium raimondii HOM05D005026 ORTHO05D005981 4.9e-118 428.3 309 72.5
CAN.G216.1 Capsicum annuum HOM05D005026 ORTHO05D005981 6.4e-118 427.9 310 71.9
Gohir.A01G169500 Gossypium hirsutum HOM05D005026 ORTHO05D005981 6.4e-118 427.9 309 72.5
Eucgr.I01430 Eucalyptus grandis HOM05D005026 ORTHO05D005981 1.4e-117 426.8 310 72.9
TPR.G2421 Trifolium pratense HOM05D005026 ORTHO05D005981 1.9e-117 426.4 315 70.5
Peaxi162Scf00042g00232 Petunia axillaris HOM05D005026 ORTHO05D005981 2.4e-117 426.0 313 71.9
EL10Ac9g21369 Beta vulgaris HOM05D005026 ORTHO05D005981 3.2e-117 425.6 305 71.1
Hma1.2p1_0163F.1_g072550 Hydrangea macrophylla HOM05D005026 ORTHO05D005981 3.2e-117 425.6 309 70.9
Cc09_g09870 Coffea canephora HOM05D005026 ORTHO05D005981 5.4e-117 424.9 308 72.7
Medtr1g112640 Medicago truncatula HOM05D005026 ORTHO05D005981 7.1e-117 424.5 310 70.6
AUR62010035 Chenopodium quinoa HOM05D005026 ORTHO05D005981 2.1e-116 422.9 309 70.9
AUR62013023 Chenopodium quinoa HOM05D005026 ORTHO05D005981 2.1e-116 422.9 310 71.3
COL.COLO4_17353 Corchorus olitorius HOM05D005026 ORTHO05D005981 2.1e-116 422.9 307 72.6
Gohir.D04G167700 Gossypium hirsutum HOM05D005026 ORTHO05D005981 2.7e-116 422.5 310 70.3
Gorai.012G156000 Gossypium raimondii HOM05D005026 ORTHO05D005981 2.7e-116 422.5 310 70.3
ECA234G1034 Erigeron canadensis HOM05D005026 ORTHO05D005981 4.6e-116 421.8 309 72.5
Nitab4.5_0005236g0010 Nicotiana tabacum HOM05D005026 ORTHO05D005981 7.8e-116 421.0 310 71.6
Gohir.A04G131300 Gossypium hirsutum HOM05D005026 ORTHO05D005981 2.3e-115 419.5 318 69.2
HanXRQChr10g0300841 Helianthus annuus HOM05D005026 ORTHO05D005981 1.9e-114 416.4 310 70.6
Aqoxy3G02662 Aquilegia oxysepala HOM05D005026 ORTHO05D005981 5.6e-114 414.8 321 68.5
PSO782G1462 Papaver somniferum HOM05D005026 ORTHO05D005981 2.1e-113 412.9 310 69.7
Sp3g30150 Schrenkiella parvula HOM05D005026 ORTHO05D005981 2.1e-113 412.9 311 69.1
AL3G49570 Arabidopsis lyrata HOM05D005026 ORTHO05D005981 3.6e-113 412.1 308 70.1
CARHR107140 Cardamine hirsuta HOM05D005026 ORTHO05D005981 3.6e-113 412.1 308 69.8
Manes.11G096700 Manihot esculenta HOM05D005026 ORTHO05D005981 1.1e-112 410.6 309 71.5
Carub.0003s3066 Capsella rubella HOM05D005026 ORTHO05D005981 5.2e-112 408.3 309 69.3
Ah.01g008260 Amaranthus hybridus HOM05D005026 ORTHO05D005981 8.9e-112 407.5 345 63.2
Lsat_1_v5_gn_4_71761 Lactuca sativa HOM05D005026 ORTHO05D005981 1.5e-111 406.8 307 70.4
PSO063G0001 Papaver somniferum HOM05D005026 ORTHO05D005981 1.5e-111 406.8 310 69.0
DCAR_022946 Daucus carota HOM05D005026 ORTHO05D005981 2.6e-111 406.0 316 69.3
MD05G1122700 Malus domestica HOM05D005026 ORTHO05D005981 2.6e-111 406.0 307 69.7
AT2G16860 Arabidopsis thaliana HOM05D005026 ORTHO05D005981 4.4e-111 405.2 309 68.6
Thhalv10022788m.g Eutrema salsugineum HOM05D005026 ORTHO05D005981 4.4e-111 405.2 307 68.4
unitig_578.g16751 Utricularia gibba HOM05D005026 ORTHO05D005981 5.8e-111 404.8 306 72.2
Nitab4.5_0002763g0050 Nicotiana tabacum HOM05D005026 ORTHO05D005981 7.6e-111 404.4 310 70.3
TWI79G0831 Tripterygium wilfordii HOM05D005026 ORTHO05D005981 6.4e-110 401.4 309 69.6
Migut.N01326 Erythranthe guttata HOM05D005026 ORTHO05D005981 1.1e-109 400.6 308 68.2
BcaB03g16411 Brassica carinata HOM05D005026 ORTHO05D005981 1.9e-109 399.8 307 68.7
A07p04280 Brassica napus HOM05D005026 ORTHO05D005981 1.9e-109 399.8 307 68.4
BraA07t28219Z Brassica rapa HOM05D005026 ORTHO05D005981 1.9e-109 399.8 307 68.4
Oeu032531.1 Olea europaea HOM05D005026 ORTHO05D005981 4.1e-109 398.7 307 66.8
Cpa.g.sc20.93 Carica papaya HOM05D005026 ORTHO05D005981 5.4e-109 398.3 267 77.9
MSTRG.16919 Avicennia marina HOM05D005026 ORTHO05D005981 9.2e-109 397.5 309 67.6
BcaC06g36185 Brassica carinata HOM05D005026 ORTHO05D005981 1.6e-108 396.7 307 68.4
C07p06780 Brassica napus HOM05D005026 ORTHO05D005981 1.6e-108 396.7 307 68.4
BolC7t41099H Brassica oleracea HOM05D005026 ORTHO05D005981 1.6e-108 396.7 307 68.4
Duzib132G0031 Durio zibethinus HOM05D005026 ORTHO05D005981 4.6e-108 395.2 348 60.6
SalBow1G5110 Salvia bowleyana HOM05D005026 ORTHO05D005981 5.1e-107 391.7 307 67.8
PGSC0003DMG400010588 Solanum tuberosum HOM05D005026 ORTHO05D005981 1.1e-106 390.6 308 67.5
THA.LOC104819652 Tarenaya hassleriana HOM05D005026 ORTHO05D005981 3.3e-106 389.0 308 67.9
CDE04G3302 Ceratophyllum demersum HOM05D005026 ORTHO05D005981 2.1e-105 386.3 314 65.6
Sopen07g025840 Solanum pennellii HOM05D005026 ORTHO05D005981 1.1e-104 384.0 308 66.2
Sc18g0006400 Simmondsia chinensis HOM05D005026 ORTHO05D005981 2.2e-102 376.3 313 66.1
Nn1g09206 Nelumbo nucifera HOM05D005026 ORTHO05D005981 1.6e-100 370.2 220 84.1
Os06g0711600 Oryza sativa ssp. japonica HOM05D005026 ORTHO05D005981 4.6e-100 368.6 327 62.1
Zm00001eb272560 Zea mays HOM05D005026 ORTHO05D005981 1.7e-99 366.7 344 59.0
Ah.01g023090 Amaranthus hybridus HOM05D005026 ORTHO05D005981 1.5e-98 363.6 249 75.1
MBI02_g23401_MAGBIO Magnolia biondii HOM05D005026 ORTHO05D005981 6.2e-97 358.2 286 67.1
Zm00001eb227710 Zea mays HOM05D005026 ORTHO05D005981 3.1e-96 355.9 352 57.7
Oeu015515.5 Olea europaea HOM05D005026 ORTHO05D005981 6.9e-96 354.8 332 59.3
FAN20G3067 Fragaria x ananassa HOM05D005026 ORTHO05D005981 1.5e-95 353.6 267 69.7
Lj5A178G71 Lonicera japonica HOM05D005026 ORTHO05D005981 2.6e-95 352.8 262 70.6
CDE06G2829 Ceratophyllum demersum HOM05D005026 ORTHO05D005981 6.4e-94 348.2 245 72.7
Sed0003938 Sechium edule HOM05D005026 ORTHO05D005981 5.1e-91 338.6 312 61.9
Pp3c18_8200 Physcomitrium patens HOM05D005026 ORTHO05D005981 1.9e-90 336.7 314 56.7
HanXRQChr10g0300791 Helianthus annuus HOM05D005026 ORTHO05D005981 2.5e-90 336.3 202 83.2
ATR0665G437 Amborella trichopoda HOM05D005026 ORTHO05D005981 5.6e-90 335.1 210 79.0
Sc14g0002280 Simmondsia chinensis HOM05D005026 ORTHO05D005981 4.8e-89 332.0 310 62.6
Actinidia28532 Actinidia chinensis HOM05D005026 ORTHO05D005981 3.4e-87 325.9 266 65.4
Mapoly0011s0013 Marchantia polymorpha HOM05D005026 ORTHO05D005981 5.8e-87 325.1 304 55.6
RcHm_v2.0_Chr1g0323251 Rosa chinensis HOM05D005026 ORTHO05D005981 6.7e-83 311.6 307 56.4
SMO143G0164 Selaginella moellendorffii HOM05D005026 ORTHO05D005981 2.1e-81 306.6 308 53.2
HanXRQChr05g0128751 Helianthus annuus HOM05D005026 ORTHO05D005981 2.4e-80 303.1 185 82.2
Ciclev10023429m.g Citrus clementina HOM05D005026 ORTHO05D005981 9.0e-80 301.2 289 57.1
CAN.G641.54 Capsicum annuum HOM05D005026 ORTHO05D005981 1.9e-66 256.9 202 68.8
Aa31LG8G14070 Aethionema arabicum HOM05D005026 ORTHO05D005981 1.6e-65 253.8 294 51.4
Solyc08g067460.1 Solanum lycopersicum HOM05D005026 ORTHO05D005981 1.2e-60 237.7 191 70.7
CBR_g18651 Chara braunii HOM05D005026 ORTHO05D005981 3.0e-59 233.0 411 40.6
Peaxi162Scf00042g02315 Petunia axillaris HOM05D005026 ORTHO05D005981 8.8e-59 231.5 380 41.1
Sopen08g021400 Solanum pennellii HOM05D005026 ORTHO05D005981 2.0e-58 230.3 244 57.4
Psat0s3098g0080 Pisum sativum HOM05D005026 ORTHO05D005981 4.8e-49 199.1 192 59.4
Duzib052G0155 Durio zibethinus HOM05D005026 ORTHO05D005981 7.7e-47 191.8 116 83.6
Cre01.g037400 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D005981 1.9e-45 187.2 234 45.3
Solyc07g052200.1 Solanum lycopersicum HOM05D005026 ORTHO05D005981 2.7e-44 183.3 308 42.5
HanXRQChr10g0300831 Helianthus annuus HOM05D005026 ORTHO05D005981 3.0e-43 179.9 272 46.0
TAR624G0954 Trochodendron aralioides HOM05D005026 ORTHO05D005981 2.9e-38 163.3 94 87.2
MCO14G518 Micromonas commoda HOM05D000144 ORTHO05D005981 1.1e-37 161.4 220 43.6
RcHm_v2.0_Chr2g0134101 Rosa chinensis HOM05D005026 ORTHO05D005981 1.6e-36 157.5 191 48.7
HPP92_021456 Vanilla planifolia HOM05D005026 ORTHO05D005981 1.4e-35 154.5 121 69.4
BcaB03g16410 Brassica carinata HOM05D005026 ORTHO05D005981 3.4e-34 149.8 95 82.1
HPP92_003763 Vanilla planifolia HOM05D005026 ORTHO05D005981 5.7e-34 149.1 125 63.2
AagrBONN_evm.TU.Sc2ySwM_344.1326 Anthoceros agrestis HOM05D005026 ORTHO05D005981 2.2e-33 147.1 198 42.9
Actinidia00627 Actinidia chinensis HOM05D005026 ORTHO05D005981 4.8e-33 146.0 93 82.8
CSS0001365 Camellia sinensis var. sinensis HOM05D005026 ORTHO05D005981 1.7e-30 137.5 125 57.6
CSS0005878 Camellia sinensis var. sinensis HOM05D005026 ORTHO05D005981 1.7e-30 137.5 125 57.6
PGSC0003DMG400010589 Solanum tuberosum HOM05D005026 ORTHO05D005981 2.9e-30 136.7 246 41.9
RcHm_v2.0_Chr6g0295751 Rosa chinensis HOM05D005026 ORTHO05D005981 1.9e-29 134.0 140 55.0
PGSC0003DMG400028947 Solanum tuberosum HOM05D005026 ORTHO05D005981 2.1e-28 130.6 79 83.5
HPP92_021472 Vanilla planifolia HOM05D005026 ORTHO05D005981 9.2e-24 115.2 99 65.7
PRCOL_00006468 Prasinoderma coloniale HOM05D000144 ORTHO05D334079 1.2e-23 114.8 230 39.1
TAR624G1238 Trochodendron aralioides HOM05D005026 ORTHO05D005981 7.8e-15 85.5 98 54.1
Psat6g231960 Pisum sativum HOM05D005026 ORTHO05D005981 1.2e-12 78.2 128 42.2
TAR624G0203 Trochodendron aralioides HOM05D005026 ORTHO05D005981 1.0e-11 75.1 56 69.6
Dinv14115 Davidia involucrata HOM05D005026 ORTHO05D005981 3.4e-10 70.1 38 78.9
MBI18_g05076_MAGBIO Magnolia biondii HOM05D005026 ORTHO05D005981 4.1e-08 63.2 43 67.4
Nn1g09215 Nelumbo nucifera HOM05D005026 ORTHO05D005981 9.2e-08 62.0 33 78.8
Pp3c21_12130 Physcomitrium patens HOM05D005026 ORTHO05D005981 3.5e-07 60.1 61 57.4


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