Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p014441 Quercus lobata HOM05D006707 ORTHO05D008243 5.0e-125 451.1 219 100.0
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 6.9e-58 228.0 140 82.9
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 2.7e-54 216.1 142 78.2
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 5.2e-37 158.7 147 61.9
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 6.3e-35 151.8 145 62.1
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 3.5e-33 146.0 148 58.1
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 3.2e-31 139.4 142 56.3
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 5.5e-31 138.7 137 56.2
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 1.6e-30 137.1 104 70.2
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 3.6e-30 136.0 133 60.2
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 4.7e-30 135.6 130 59.2
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 4.0e-29 132.5 140 52.9
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 8.8e-29 131.3 141 53.9
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 8.8e-29 131.3 87 73.6
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 1.5e-28 130.6 127 57.5
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 5.7e-28 128.6 136 53.7
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 5.7e-28 128.6 136 55.1
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 5.7e-28 128.6 136 53.7
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 9.7e-28 127.9 128 55.5
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 2.2e-27 126.7 127 55.1
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 2.8e-27 126.3 122 57.4
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 3.7e-27 125.9 87 72.4
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 3.7e-27 125.9 131 57.3
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 4.8e-27 125.6 131 57.3
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 6.3e-27 125.2 135 53.3
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.4e-26 124.0 105 65.7
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.4e-26 124.0 98 68.4
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 1.8e-26 123.6 95 67.4
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 2.4e-26 123.2 131 49.6
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 2.4e-26 123.2 87 65.5
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 3.1e-26 122.9 127 53.5
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 3.1e-26 122.9 131 53.4
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 4.1e-26 122.5 129 52.7
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 5.3e-26 122.1 131 55.7
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 1.0e-24 117.9 113 57.5
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 2.2e-24 116.7 84 69.0
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 1.1e-23 114.4 118 51.7
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 1.5e-23 114.0 129 51.2
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 1.5e-23 114.0 94 59.6
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 2.5e-23 113.2 88 60.2
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 3.2e-23 112.8 121 50.4
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 9.4e-23 111.3 121 50.4
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 9.4e-23 111.3 126 50.8
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 1.6e-22 110.5 144 47.2
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 1.6e-22 110.5 99 58.6
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 2.7e-22 109.8 137 46.7
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 3.6e-22 109.4 167 44.9
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 8.0e-22 108.2 151 45.7
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 8.0e-22 108.2 85 64.7
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 1.8e-21 107.1 88 62.5
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 3.0e-21 106.3 126 50.0
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 4.0e-21 105.9 89 56.2
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 6.8e-21 105.1 98 57.1
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 8.8e-21 104.8 128 46.1
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 8.8e-21 104.8 126 49.2
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 1.5e-20 104.0 92 57.6
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 2.6e-20 103.2 84 56.0
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 3.4e-20 102.8 89 57.3
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 4.4e-20 102.4 88 56.8
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 5.7e-20 102.1 90 55.6
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 5.7e-20 102.1 84 57.1
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 7.5e-20 101.7 118 42.4
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 7.5e-20 101.7 103 48.5
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 7.5e-20 101.7 92 58.7
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 9.8e-20 101.3 90 54.4
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 9.8e-20 101.3 103 47.6
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 9.8e-20 101.3 90 54.4
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 1.3e-19 100.9 86 59.3
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 1.3e-19 100.9 78 65.4
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 1.3e-19 100.9 101 52.5
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 2.2e-19 100.1 90 52.2
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 2.8e-19 99.8 83 61.4
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 4.8e-19 99.0 90 54.4
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 4.8e-19 99.0 85 60.0
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 8.3e-19 98.2 90 53.3
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 1.1e-18 97.8 90 53.3
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 1.2e-17 94.4 85 52.9
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 5.9e-17 92.0 109 45.9
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 2.9e-16 89.7 68 70.6
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 6.5e-16 88.6 119 45.4
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 2.5e-15 86.7 75 62.7
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 7.8e-09 65.1 104 35.6
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 2.5e-07 60.1 44 65.9
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 1.6e-06 57.4 59 47.5
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 3.6e-06 56.2 46 63.0
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 3.6e-06 56.2 47 61.7
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 4.7e-06 55.8 83 43.4


User provided reference genes

Program Settings