Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 0.0e+00 1223.8 772 100.0
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 2.8e-154 550.1 769 51.0
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 3.1e-153 546.6 699 56.9
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 2.6e-152 543.5 771 52.9
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 1.3e-151 541.2 696 56.6
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 2.5e-150 537.0 762 53.3
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 4.3e-147 526.2 697 54.7
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 1.3e-146 524.6 696 54.5
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 1.6e-146 524.2 696 56.3
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 8.2e-146 521.9 701 54.6
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 1.1e-145 521.5 760 54.3
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 1.4e-145 521.2 661 58.5
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 1.4e-145 521.2 696 56.5
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 1.8e-145 520.8 696 54.2
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 1.1e-142 511.5 697 51.5
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 1.4e-142 511.1 755 52.8
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 2.5e-142 510.4 764 51.4
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 1.3e-140 504.6 702 50.1
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 1.3e-140 504.6 748 48.3
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 2.3e-140 503.8 698 49.9
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 4.1e-137 493.0 769 51.0
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 2.5e-134 483.8 699 47.4
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 2.1e-133 480.7 710 48.9
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 4.6e-133 479.6 764 48.8
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 7.9e-133 478.8 765 47.8
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 6.7e-132 475.7 692 48.0
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 8.8e-132 475.3 764 49.0
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 5.7e-131 472.6 690 44.9
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 7.4e-131 472.2 764 49.3
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 7.4e-131 472.2 712 47.8
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 9.7e-131 471.9 699 44.6
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 2.2e-130 470.7 711 45.4
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 2.8e-130 470.3 690 46.2
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 1.2e-128 464.9 690 44.6
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 4.5e-128 463.0 717 47.4
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 6.5e-127 459.1 711 45.0
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 1.9e-126 457.6 632 53.5
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 6.1e-125 452.6 669 46.6
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 3.0e-124 450.3 738 43.8
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 6.7e-124 449.1 696 46.7
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 5.7e-123 446.0 691 47.9
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 1.8e-121 441.0 754 48.7
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 4.1e-121 439.9 632 50.3
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 7.0e-121 439.1 698 48.7
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 1.6e-120 438.0 728 43.3
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 2.0e-120 437.6 756 47.0
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 1.0e-119 435.3 769 46.8
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 6.5e-119 432.6 702 49.3
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 7.2e-118 429.1 712 49.3
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 1.5e-115 421.4 689 46.4
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 1.5e-115 421.4 714 44.1
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 8.2e-114 415.6 717 47.3
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 2.4e-113 414.1 682 47.5
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 7.0e-113 412.5 757 45.6
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 2.5e-110 404.1 773 46.4
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 4.2e-110 403.3 628 47.1
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 1.8e-108 397.9 710 45.8
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 1.8e-105 387.9 667 47.2
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 1.6e-104 384.8 687 43.7
FAN08G0261 Fragaria x ananassa HOM05D007322 ORTHO05D009029 1.3e-103 381.7 315 78.7
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 1.7e-103 381.3 686 47.2
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 2.2e-103 380.9 632 49.2
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 2.9e-103 380.6 705 46.8
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 9.5e-102 375.6 697 45.2
ClCG10G013500 Citrullus lanatus HOM05D007322 ORTHO05D009029 2.1e-101 374.4 302 69.2
Haze_01685 Corylus avellana HOM05D007322 ORTHO05D009029 3.4e-99 367.1 216 85.6
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 2.8e-98 364.0 696 44.7
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 1.8e-97 361.3 713 43.5
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 8.6e-95 352.4 702 41.7
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 2.5e-94 350.9 695 46.0
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 3.3e-94 350.5 695 46.0
Nitab4.5_0000001g0160 Nicotiana tabacum HOM05D007322 ORTHO05D009029 2.6e-91 340.9 339 69.3
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 4.4e-91 340.1 696 41.4
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 7.0e-89 332.8 658 45.3
DCAR_025358 Daucus carota HOM05D007322 ORTHO05D009029 4.6e-88 330.1 217 74.7
Nitab4.5_0003788g0020 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.0e-84 318.9 309 70.9
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 6.8e-84 316.2 720 41.4
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 5.8e-83 313.2 689 42.5
Eucgr.G00576 Eucalyptus grandis HOM05D007322 ORTHO05D009029 6.4e-82 309.7 217 71.9
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 6.6e-79 299.7 665 43.5
FAN04G1727 Fragaria x ananassa HOM05D001260 ORTHO05D002424 2.0e-75 288.1 222 77.5
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 5.8e-75 286.6 754 39.7
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 1.8e-68 265.0 684 39.3
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 3.1e-68 264.2 666 39.0
Peaxi162Scf00152g01437 Petunia axillaris HOM05D007322 ORTHO05D009029 2.6e-67 261.2 177 74.6
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 1.4e-60 238.8 637 40.8
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 5.2e-60 236.9 176 66.5
Nitab4.5_0000001g0170 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.7e-55 221.9 253 58.9
Haze_01695 Corylus avellana HOM05D004517 ORTHO05D005366 6.2e-53 213.4 243 52.7
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 8.1e-53 213.0 235 47.7
Oeu008898.1 Olea europaea HOM05D007322 ORTHO05D009029 2.4e-52 211.5 195 67.2
Cpa.g.sc113.59 Carica papaya HOM05D007322 ORTHO05D009029 5.5e-41 173.7 110 77.3
DCAR_025359 Daucus carota HOM05D007322 ORTHO05D009029 9.3e-41 172.9 152 70.4
Peaxi162Scf00152g01436 Petunia axillaris HOM05D007322 ORTHO05D009029 1.5e-38 165.6 287 47.0
Nitab4.5_0003788g0010 Nicotiana tabacum HOM05D007322 ORTHO05D009029 2.5e-38 164.9 155 68.4
Actinidia26149 Actinidia chinensis HOM05D007322 ORTHO05D009029 3.0e-31 141.4 130 70.8
Cpa.g.c42393 Carica papaya HOM05D007322 ORTHO05D009029 4.5e-27 127.5 106 62.3
QL11p018544 Quercus lobata HOM05D007322 ORTHO05D009029 1.3e-21 109.4 101 71.3
QL10p013814 Quercus lobata HOM05D000938 ORTHO05D001451 3.1e-20 104.8 55 89.1
PGSC0003DMG400008423 Solanum tuberosum HOM05D007322 ORTHO05D009029 3.8e-18 97.8 73 67.1
QL09p005546 Quercus lobata HOM05D000132 ORTHO05D000058 1.7e-13 82.4 47 76.6
Pp3c24_4430 Physcomitrium patens HOM05D007322 ORTHO05D009029 2.8e-13 81.6 137 34.3
Peaxi162Scf00427g00004 Petunia axillaris HOM05D007322 ORTHO05D009029 4.5e-11 74.3 47 70.2
Cpa.g.c31488 Carica papaya HOM05D007322 ORTHO05D009029 1.3e-10 72.8 78 43.6
CDE05G3586 Ceratophyllum demersum HOM05D000602 ORTHO05D009029 1.3e-10 72.8 92 44.6
Rhsim12G0158500 Rhododendron simsii HOM05D003056 ORTHO05D003422 1.7e-10 72.4 228 22.4
QL93p2013_0042 Quercus lobata HOM05D000844 ORTHO05D000680 6.5e-10 70.5 38 81.6
Nn8g40410 Nelumbo nucifera HOM05D003056 ORTHO05D003422 1.9e-09 68.9 206 23.3
Ca_02033_v3 Cicer arietinum L. HOM05D003056 ORTHO05D003422 2.5e-09 68.6 182 23.6
Rhsim12G0158600 Rhododendron simsii HOM05D003056 ORTHO05D003422 3.2e-09 68.2 187 23.0
CDE07G1469 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 2.1e-08 65.5 243 23.0
Oeu027802.1 Olea europaea HOM05D007322 ORTHO05D009029 1.0e-07 63.2 74 45.9
Psat1g146880 Pisum sativum HOM05D003056 ORTHO05D003422 1.0e-07 63.2 288 21.5
Eucgr.C02384 Eucalyptus grandis HOM05D003056 ORTHO05D003422 1.4e-07 62.8 186 23.7
EL10Ac8g18299 Beta vulgaris HOM05D003056 ORTHO05D003422 2.3e-07 62.0 274 23.4
DCAR_020128 Daucus carota HOM05D003056 ORTHO05D003422 3.0e-07 61.6 255 21.2
QL03p071975 Quercus lobata HOM05D001391 ORTHO05D000058 3.0e-07 61.6 36 72.2
HPP92_017253 Vanilla planifolia HOM05D004127 ORTHO05D005119 3.0e-07 61.6 114 32.5
QL07p034547 Quercus lobata HOM05D000053 ORTHO05D000448 3.9e-07 61.2 40 65.0
MD13G1249100 Malus domestica HOM05D003056 ORTHO05D003422 5.2e-07 60.8 186 22.0
Medtr2g078690 Medicago truncatula HOM05D000424 ORTHO05D000355 5.2e-07 60.8 138 26.1
Pp3c4_14490 Physcomitrium patens HOM05D005862 ORTHO05D000003 5.2e-07 60.8 167 24.0
AUR62021315 Chenopodium quinoa HOM05D003056 ORTHO05D003422 6.7e-07 60.5 169 23.7
AUR62033232 Chenopodium quinoa HOM05D003056 ORTHO05D003422 6.7e-07 60.5 169 23.7
COL.COLO4_28305 Corchorus olitorius HOM05D006106 ORTHO05D034875 6.7e-07 60.5 168 24.4
Pp3c22_3230 Physcomitrium patens HOM05D003056 ORTHO05D003422 6.7e-07 60.5 116 24.1
Cc00_g34390 Coffea canephora HOM05D006106 ORTHO05D007662 8.8e-07 60.1 112 28.6
HPP92_017249 Vanilla planifolia HOM05D004127 ORTHO05D005119 8.8e-07 60.1 114 31.6
Cc11_g03820 Coffea canephora HOM05D006106 ORTHO05D015839 1.1e-06 59.7 129 28.7
HanXRQChr07g0202171 Helianthus annuus HOM05D003056 ORTHO05D003422 1.1e-06 59.7 187 25.1
Nitab4.5_0000586g0120 Nicotiana tabacum HOM05D006106 ORTHO05D007662 2.0e-06 58.9 131 28.2
Cpa.g.sc14.149 Carica papaya HOM05D007093 ORTHO05D008910 3.3e-06 58.2 138 26.8
Cc06_g17630 Coffea canephora HOM05D006106 ORTHO05D007662 3.3e-06 58.2 122 28.7
Sabra07G0055900 Salix brachista HOM05D000293 ORTHO05D009029 5.7e-06 57.4 90 37.8
COL.COLO4_29977 Corchorus olitorius HOM05D003056 ORTHO05D003422 7.4e-06 57.0 293 23.2
Lalb_Chr15g0084101 Lupinus albus HOM05D000001 ORTHO05D000003 7.4e-06 57.0 105 32.4
AagrBONN_evm.TU.Sc2ySwM_344.5344 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.7e-06 56.6 198 24.7
Sabra17G0065200 Salix brachista HOM05D007322 ORTHO05D009029 9.7e-06 56.6 44 61.4


User provided reference genes

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