Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 2.0e-110 402.5 213 100.0
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 2.0e-70 269.6 213 69.5
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 2.2e-69 266.2 213 68.1
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 1.4e-68 263.5 213 71.4
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 3.2e-60 235.7 223 63.2
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 4.2e-60 235.3 213 60.6
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 1.4e-58 230.3 215 63.3
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 6.7e-58 228.0 213 60.6
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 8.8e-58 227.6 221 58.8
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 1.5e-57 226.9 214 62.1
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.6e-57 226.1 216 58.3
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 4.4e-57 225.3 213 60.1
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 5.7e-57 224.9 223 58.3
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 9.7e-57 224.2 198 61.1
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.3e-56 223.8 216 57.9
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 2.2e-56 223.0 217 60.4
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 2.2e-56 223.0 220 58.2
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.8e-56 222.6 213 59.6
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.7e-56 222.2 216 57.9
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 6.3e-56 221.5 216 57.4
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 8.2e-56 221.1 220 59.1
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 1.8e-55 219.9 220 57.7
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 4.1e-55 218.8 221 57.0
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 5.9e-54 214.9 220 57.3
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 1.7e-53 213.4 196 60.2
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 2.2e-53 213.0 228 57.5
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 6.5e-53 211.5 206 60.2
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 8.5e-53 211.1 213 55.9
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 1.1e-52 210.7 200 57.5
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 1.5e-52 210.3 185 64.9
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 1.9e-52 209.9 215 57.2
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 2.5e-52 209.5 215 56.7
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 2.7e-51 206.1 219 58.0
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 4.7e-51 205.3 216 54.6
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.7e-51 205.3 216 54.6
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 8.0e-51 204.5 215 54.9
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 2.3e-50 203.0 201 56.7
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 3.0e-50 202.6 182 59.3
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 6.7e-50 201.4 198 57.6
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 1.1e-49 200.7 225 52.9
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 1.5e-49 200.3 194 60.8
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 2.0e-49 199.9 227 54.2
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 2.0e-49 199.9 188 61.2
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 2.6e-49 199.5 191 58.6
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 4.4e-49 198.7 168 60.1
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 1.7e-48 196.8 186 57.5
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.4e-47 193.7 201 53.7
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 7.0e-47 191.4 199 57.3
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 7.0e-47 191.4 201 52.2
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 4.5e-46 188.7 155 63.2
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 5.9e-46 188.3 161 62.1
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 5.9e-46 188.3 186 53.2
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 1.7e-45 186.8 187 51.9
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 1.7e-45 186.8 173 60.1
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 2.9e-45 186.0 187 51.9
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 3.8e-45 185.7 157 64.3
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 1.5e-44 183.7 218 53.2
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 4.2e-44 182.2 154 62.3
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 1.2e-43 180.6 216 50.9
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 1.6e-43 180.3 193 53.9
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 1.6e-43 180.3 226 49.1
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 2.1e-43 179.9 172 59.3
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 2.7e-43 179.5 194 55.2
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 3.6e-43 179.1 215 49.8
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 4.7e-43 178.7 216 51.9
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 8.0e-43 177.9 183 51.9
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 8.0e-43 177.9 263 45.2
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 6.8e-42 174.9 185 55.7
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.5e-41 173.7 216 51.9
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 2.6e-41 172.9 163 58.9
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 4.8e-40 168.7 177 54.2
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 4.8e-40 168.7 235 48.1
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 6.3e-40 168.3 250 46.0
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.1e-39 167.5 122 67.2
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.2e-38 164.1 176 54.5
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 2.0e-38 163.3 173 54.9
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 3.8e-37 159.1 223 48.4
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 3.8e-37 159.1 163 53.4
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 8.5e-37 157.9 179 49.2
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-36 157.5 184 53.8
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 1.1e-36 157.5 226 48.7
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 1.9e-36 156.8 227 47.6
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 5.5e-36 155.2 226 45.6
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 7.2e-36 154.8 225 47.6
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.2e-35 154.1 187 50.3
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 2.1e-35 153.3 219 45.7
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 3.6e-35 152.5 220 46.8
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 3.6e-35 152.5 220 46.8
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 3.6e-35 152.5 220 46.8
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 1.8e-34 150.2 220 46.4
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 1.8e-34 150.2 225 44.0
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 4.0e-34 149.1 201 47.3
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 5.2e-34 148.7 221 45.2
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 8.8e-34 147.9 223 48.4
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 8.8e-34 147.9 223 48.4
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 3.4e-33 146.0 175 51.4
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 7.5e-33 144.8 176 49.4
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 2.2e-32 143.3 215 45.6
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 2.2e-32 143.3 106 63.2
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 4.9e-32 142.1 227 43.6
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 6.3e-32 141.7 227 44.5
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 9.2e-31 137.9 221 43.9
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 5.9e-30 135.2 222 44.1
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 1.3e-29 134.0 97 66.0
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 1.3e-29 134.0 97 66.0
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 1.3e-29 134.0 97 66.0
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 2.9e-29 132.9 97 66.0
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.5e-28 130.6 193 44.0
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 2.8e-27 126.3 215 42.3
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.2e-25 120.9 187 42.8
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 2.2e-24 116.7 217 41.5
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.7e-24 115.9 75 69.3
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 1.8e-23 113.6 92 58.7
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 1.8e-23 113.6 84 63.1
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 1.6e-22 110.5 139 46.8
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 1.3e-21 107.5 164 42.1
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 2.3e-21 106.7 128 51.6
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 1.8e-18 97.1 97 48.5
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 5.2e-18 95.5 194 38.1
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 4.4e-17 92.4 68 75.0
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 6.4e-16 88.6 196 37.8
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 6.0e-14 82.0 112 42.0
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 6.0e-14 82.0 112 42.0
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 4.3e-12 75.9 41 73.2
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 4.0e-10 69.3 62 50.0
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 4.4e-09 65.9 131 35.1
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 7.5e-09 65.1 39 66.7
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 1.7e-08 63.9 104 36.5
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 1.7e-08 63.9 111 36.9
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 3.2e-07 59.7 65 52.3
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 9.2e-07 58.2 181 27.6
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 2.1e-06 57.0 184 29.3


User provided reference genes

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