Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 6.3e-131 470.7 224 100.0
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 1.1e-108 396.7 224 83.0
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 2.1e-102 375.9 224 80.4
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 1.3e-96 356.7 200 83.5
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 1.7e-88 329.7 225 72.9
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 1.5e-87 326.6 223 74.0
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 2.5e-87 325.9 225 72.9
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 3.3e-87 325.5 225 70.7
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 1.2e-86 323.6 226 73.9
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 2.8e-86 322.4 225 71.6
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 2.8e-86 322.4 226 72.6
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 1.2e-84 317.0 230 68.7
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 2.0e-84 316.2 234 71.4
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 7.5e-84 314.3 225 69.8
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.3e-83 313.5 222 71.2
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 3.7e-83 312.0 232 68.5
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 4.9e-83 311.6 229 69.0
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 6.4e-83 311.2 230 69.1
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 8.3e-83 310.8 245 66.9
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 8.3e-83 310.8 226 67.3
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 8.3e-83 310.8 223 68.2
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 2.4e-82 309.3 228 68.9
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 3.2e-82 308.9 223 65.9
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 4.1e-82 308.5 210 71.9
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 1.2e-81 307.0 220 70.5
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 3.5e-81 305.4 217 69.6
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 4.6e-81 305.1 227 69.6
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 1.3e-80 303.5 205 72.7
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 1.1e-79 300.4 225 68.9
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.5e-79 300.1 228 67.1
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 3.3e-79 298.9 199 73.9
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 3.3e-79 298.9 199 73.9
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 9.5e-79 297.4 227 67.4
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 2.1e-78 296.2 225 67.1
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 3.6e-78 295.4 210 66.2
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 6.2e-78 294.7 227 66.1
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 1.0e-77 293.9 196 73.5
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 1.0e-77 293.9 215 68.4
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.0e-77 293.9 227 66.1
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 1.4e-77 293.5 227 67.4
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 2.3e-77 292.7 224 65.6
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 5.2e-77 291.6 217 69.1
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 1.2e-76 290.4 187 72.2
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 2.0e-76 289.7 192 71.9
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 2.0e-76 289.7 185 76.8
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 2.0e-76 289.7 224 64.7
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 4.4e-76 288.5 209 67.5
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 7.5e-76 287.7 226 66.4
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 7.5e-76 287.7 226 64.6
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 1.7e-75 286.6 226 66.4
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 2.9e-75 285.8 217 67.3
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 6.4e-75 284.6 216 67.1
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 8.3e-75 284.3 229 63.3
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 8.3e-75 284.3 190 66.3
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 1.1e-74 283.9 211 67.3
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 3.2e-74 282.3 223 65.9
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 5.4e-74 281.6 229 64.6
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 1.6e-73 280.0 211 66.4
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 1.0e-72 277.3 222 67.6
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 1.0e-72 277.3 190 65.3
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 1.3e-72 276.9 208 66.8
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 3.0e-72 275.8 231 62.3
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 3.9e-72 275.4 215 63.7
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 5.0e-72 275.0 189 70.4
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 5.0e-72 275.0 223 60.5
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 6.6e-72 274.6 217 62.7
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.5e-71 273.5 239 61.1
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 3.3e-71 272.3 225 60.9
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 1.6e-70 270.0 226 61.1
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 3.6e-70 268.9 206 62.6
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 4.7e-70 268.5 226 61.1
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 8.1e-70 267.7 199 68.3
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 1.8e-69 266.5 229 60.7
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 2.3e-69 266.2 208 63.5
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 4.0e-69 265.4 215 61.9
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 8.9e-69 264.2 237 60.8
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 2.6e-68 262.7 184 72.3
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 5.8e-68 261.5 228 60.1
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 7.5e-68 261.2 224 61.2
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 2.9e-67 259.2 223 63.7
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 6.4e-67 258.1 231 59.7
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 6.4e-67 258.1 231 59.7
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 8.3e-67 257.7 221 61.1
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.9e-66 256.5 235 60.0
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 3.2e-66 255.8 231 58.9
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 7.1e-66 254.6 189 70.9
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 2.7e-65 252.7 221 60.6
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 4.6e-65 251.9 180 71.7
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 1.0e-64 250.8 228 58.8
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 3.9e-64 248.8 221 59.7
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 1.9e-63 246.5 224 60.7
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 2.5e-63 246.1 240 56.7
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 8.1e-62 241.1 182 64.3
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 1.1e-61 240.7 161 69.6
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 4.4e-60 235.3 161 67.7
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 7.6e-60 234.6 168 67.9
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 2.2e-59 233.0 125 85.6
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 2.4e-58 229.6 204 58.8
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 1.6e-57 226.9 152 71.7
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 4.6e-57 225.3 145 72.4
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 2.5e-55 219.5 186 54.8
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 3.1e-53 212.6 126 81.0
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 8.9e-53 211.1 181 63.0
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 2.4e-50 203.0 123 76.4
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 3.0e-48 196.1 152 59.9
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 5.1e-48 195.3 152 55.3
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.1e-47 194.1 156 64.7
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.1e-47 194.1 156 64.7
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 1.8e-45 186.8 226 49.1
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 3.8e-43 179.1 137 65.7
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 2.4e-42 176.4 138 65.9
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 3.2e-42 176.0 111 68.5
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.6e-38 163.7 143 62.2
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 2.2e-35 153.3 82 90.2
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 2.9e-35 152.9 93 78.5
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 7.1e-34 148.3 91 74.7
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 3.0e-32 142.9 154 45.5
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 9.6e-31 137.9 136 46.3
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 1.6e-30 137.1 127 44.9
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 1.8e-29 133.7 139 51.8
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 1.6e-25 120.6 124 55.6
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 3.6e-17 92.8 114 35.1
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 3.0e-08 63.2 44 61.4
vmacro22872 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 3.3e-07 59.7 36 75.0


User provided reference genes

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