Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p003478 Quercus lobata HOM05D005528 ORTHO05D007066 1.7e-34 148.7 69 100.0
QL10p003559 Quercus lobata HOM05D005528 ORTHO05D007066 5.8e-27 123.6 66 84.8
Thecc.06G231500 Theobroma cacao HOM05D005528 ORTHO05D007066 9.9e-27 122.9 66 83.3
COL.COLO4_31864 Corchorus olitorius HOM05D005528 ORTHO05D007066 1.3e-26 122.5 66 83.3
Gohir.D05G176400 Gossypium hirsutum HOM05D005528 ORTHO05D007066 2.2e-26 121.7 66 81.8
Gorai.009G181800 Gossypium raimondii HOM05D005528 ORTHO05D007066 2.2e-26 121.7 66 81.8
Dinv13958 Davidia involucrata HOM05D005528 ORTHO05D007066 4.9e-26 120.6 66 80.3
GSVIVG01007237001 Vitis vinifera HOM05D005528 ORTHO05D007066 4.9e-26 120.6 66 81.8
PGR004G2776 Punica granatum HOM05D005528 ORTHO05D007066 6.4e-26 120.2 66 81.8
Manes.16G001400 Manihot esculenta HOM05D005528 ORTHO05D007066 8.4e-26 119.8 66 80.3
Lj1A1238T62 Lonicera japonica HOM05D005528 ORTHO05D007066 1.1e-25 119.4 66 78.8
Gohir.A05G173400 Gossypium hirsutum HOM05D005528 ORTHO05D007066 1.4e-25 119.0 66 80.3
TWI38G1545 Tripterygium wilfordii HOM05D005528 ORTHO05D007066 1.4e-25 119.0 66 81.8
Cfa000120 Carpinus fangiana HOM05D005528 ORTHO05D007066 1.9e-25 118.6 66 80.3
Ciclev10016375m.g Citrus clementina HOM05D005528 ORTHO05D007066 1.9e-25 118.6 66 81.8
Lj4g0026553 Lotus japonicus HOM05D005528 ORTHO05D007066 2.4e-25 118.2 66 78.8
Lj5g0008711 Lotus japonicus HOM05D005528 ORTHO05D007066 2.4e-25 118.2 66 78.8
Potri.011G023000 Populus trichocarpa HOM05D005528 ORTHO05D007066 2.4e-25 118.2 66 78.8
CSS0037266 Camellia sinensis var. sinensis HOM05D005528 ORTHO05D007066 4.1e-25 117.5 66 77.3
QL03p008514 Quercus lobata HOM05D005528 ORTHO05D007066 4.1e-25 117.5 65 83.1
TAR624G1052 Trochodendron aralioides HOM05D005528 ORTHO05D007066 5.4e-25 117.1 66 78.8
Aqoxy1G04149 Aquilegia oxysepala HOM05D005528 ORTHO05D007066 9.2e-25 116.3 66 80.3
Duzib235G0675 Durio zibethinus HOM05D005528 ORTHO05D007066 9.2e-25 116.3 66 77.3
MD05G1356600 Malus domestica HOM05D005528 ORTHO05D007066 9.2e-25 116.3 66 77.3
Nn1g07332 Nelumbo nucifera HOM05D005528 ORTHO05D007066 9.2e-25 116.3 66 77.3
Cpa.g.sc152.65 Carica papaya HOM05D005528 ORTHO05D007066 1.2e-24 115.9 66 77.3
CANSAT56G1404 Cannabis sativa HOM05D005528 ORTHO05D007066 1.6e-24 115.5 66 77.3
Glyma.17G009100 Glycine max HOM05D005528 ORTHO05D007066 1.6e-24 115.5 66 75.8
FAN21G0894 Fragaria x ananassa HOM05D005528 ORTHO05D007066 2.1e-24 115.2 66 77.3
DCAR_030878 Daucus carota HOM05D005528 ORTHO05D007066 2.7e-24 114.8 66 75.8
FAN25G0965 Fragaria x ananassa HOM05D005528 ORTHO05D007066 2.7e-24 114.8 66 77.3
Oeu003172.1 Olea europaea HOM05D005528 ORTHO05D007066 2.7e-24 114.8 66 77.3
Sc17g0007680 Simmondsia chinensis HOM05D005528 ORTHO05D007066 2.7e-24 114.8 66 78.8
CiPaw.10G076700 Carya illinoinensis HOM05D005528 ORTHO05D007066 3.5e-24 114.4 66 77.3
Psat4g003480 Pisum sativum HOM05D005528 ORTHO05D007066 3.5e-24 114.4 66 77.3
Sabra11G0014000 Salix brachista HOM05D005528 ORTHO05D007066 3.5e-24 114.4 66 75.8
MSTRG.7174 Avicennia marina HOM05D005528 ORTHO05D007066 4.6e-24 114.0 66 77.3
QL10p003542 Quercus lobata HOM05D005528 ORTHO05D007066 6.0e-24 113.6 66 77.3
SalBow8G0359 Salvia bowleyana HOM05D005528 ORTHO05D007066 6.0e-24 113.6 66 77.3
Ca_21050_v3 Cicer arietinum L. HOM05D005528 ORTHO05D007066 7.8e-24 113.2 66 74.2
ECA248G2494 Erigeron canadensis HOM05D005528 ORTHO05D007066 7.8e-24 113.2 66 74.2
FvH4_3g01110 Fragaria vesca HOM05D005528 ORTHO05D007066 7.8e-24 113.2 66 74.2
Lalb_Chr15g0087911 Lupinus albus HOM05D005528 ORTHO05D007066 7.8e-24 113.2 66 74.2
SGA_v2.0_scaffold7G03770 Striga asiatica HOM05D005528 ORTHO05D007066 7.8e-24 113.2 66 75.8
VMungo1215G2369 Vigna mungo HOM05D005528 ORTHO05D007066 7.8e-24 113.2 66 77.3
TPR.G36996 Trifolium pratense HOM05D005528 ORTHO05D007066 1.0e-23 112.8 66 74.2
arahy.Tifrunner.gnm1.ann1.GWT3TM Arachis hypogaea HOM05D005528 ORTHO05D007066 1.7e-23 112.1 66 74.2
Lsat_1_v5_gn_0_40241 Lactuca sativa HOM05D005528 ORTHO05D007066 1.7e-23 112.1 66 74.2
RcHm_v2.0_Chr5g0001681 Rosa chinensis HOM05D005528 ORTHO05D007066 1.7e-23 112.1 66 74.2
CAN.G1186.18 Capsicum annuum HOM05D005528 ORTHO05D007066 2.3e-23 111.7 66 74.2
Eucgr.D01386 Eucalyptus grandis HOM05D005528 ORTHO05D007066 2.3e-23 111.7 66 75.8
Sopen11g006860 Solanum pennellii HOM05D005528 ORTHO05D007066 2.3e-23 111.7 66 74.2
arahy.Tifrunner.gnm1.ann1.T9A2AP Arachis hypogaea HOM05D005528 ORTHO05D007066 3.0e-23 111.3 66 74.2
Medtr4g132890 Medicago truncatula HOM05D005528 ORTHO05D007066 3.0e-23 111.3 66 72.7
AUR62021877 Chenopodium quinoa HOM05D005528 ORTHO05D007066 3.9e-23 110.9 66 74.2
ClCG01G021550 Citrullus lanatus HOM05D005528 ORTHO05D007066 3.9e-23 110.9 66 74.2
CsaV3_6G048570 Cucumis sativus L. HOM05D005528 ORTHO05D007066 3.9e-23 110.9 66 74.2
Nitab4.5_0000143g0380 Nicotiana tabacum HOM05D005528 ORTHO05D007066 3.9e-23 110.9 66 74.2
Nitab4.5_0001198g0200 Nicotiana tabacum HOM05D005528 ORTHO05D007066 3.9e-23 110.9 66 74.2
PSO675G5657 Papaver somniferum HOM05D005528 ORTHO05D007066 3.9e-23 110.9 66 75.8
Aa31LG6G4400 Aethionema arabicum HOM05D005528 ORTHO05D007066 5.1e-23 110.5 66 74.2
AT4G22305 Arabidopsis thaliana HOM05D005528 ORTHO05D007066 5.1e-23 110.5 66 74.2
PSO541G4654 Papaver somniferum HOM05D005528 ORTHO05D007066 5.1e-23 110.5 66 72.7
Solyc11g012070.3 Solanum lycopersicum HOM05D005528 ORTHO05D007066 5.1e-23 110.5 66 72.7
Actinidia26871 Actinidia chinensis HOM05D005528 ORTHO05D007066 6.6e-23 110.2 66 74.2
Zm00001eb066860 Zea mays HOM05D005528 ORTHO05D007066 6.6e-23 110.2 65 72.3
Cc09_g00990 Coffea canephora HOM05D005528 ORTHO05D007066 8.6e-23 109.8 66 74.2
PGSC0003DMG400013339 Solanum tuberosum HOM05D005528 ORTHO05D007066 8.6e-23 109.8 66 72.7
vmacro03653 Vaccinium macrocarpon HOM05D005528 ORTHO05D007066 8.6e-23 109.8 66 74.2
EL10Ac8g20170 Beta vulgaris HOM05D005528 ORTHO05D007066 1.1e-22 109.4 66 72.7
Ah.09g234310 Amaranthus hybridus HOM05D005528 ORTHO05D007066 1.5e-22 109.0 66 74.2
Lalb_Chr15g0087921 Lupinus albus HOM05D005528 ORTHO05D007066 1.5e-22 109.0 65 72.3
Oeu049726.1 Olea europaea HOM05D005528 ORTHO05D007066 1.5e-22 109.0 66 74.2
Hund21156 Selenicereus undatus HOM05D005528 ORTHO05D007066 1.5e-22 109.0 66 72.7
AT4G22300 Arabidopsis thaliana HOM05D005528 ORTHO05D007066 1.9e-22 108.6 66 72.7
HanXRQChr01g0006671 Helianthus annuus HOM05D005528 ORTHO05D007066 1.9e-22 108.6 66 71.2
Prupe.4G012400 Prunus persica HOM05D005528 ORTHO05D007066 1.9e-22 108.6 66 72.7
Sed0027431 Sechium edule HOM05D005528 ORTHO05D007066 3.3e-22 107.8 66 71.2
CARHR229210 Cardamine hirsuta HOM05D005528 ORTHO05D007066 4.3e-22 107.5 66 71.2
A03p53440 Brassica napus HOM05D005528 ORTHO05D007066 5.6e-22 107.1 67 71.6
BraA03t14410Z Brassica rapa HOM05D005528 ORTHO05D007066 5.6e-22 107.1 67 71.6
AUR62012779 Chenopodium quinoa HOM05D005528 ORTHO05D007066 5.6e-22 107.1 66 71.2
Thhalv10025978m.g Eutrema salsugineum HOM05D005528 ORTHO05D007066 9.6e-22 106.3 66 72.7
Os04g0669500 Oryza sativa ssp. japonica HOM05D005528 ORTHO05D007066 9.6e-22 106.3 65 72.3
AL7G31310 Arabidopsis lyrata HOM05D005528 ORTHO05D007066 1.2e-21 105.9 66 71.2
HanXRQChr01g0006681 Helianthus annuus HOM05D005528 ORTHO05D007066 1.2e-21 105.9 66 68.2
BcaNung02505 Brassica carinata HOM05D005528 ORTHO05D007066 1.6e-21 105.5 67 70.1
C07p51770 Brassica napus HOM05D005528 ORTHO05D007066 1.6e-21 105.5 67 70.1
BolC7t45679H Brassica oleracea HOM05D005528 ORTHO05D007066 1.6e-21 105.5 67 70.1
unitig_37.g12163 Utricularia gibba HOM05D005528 ORTHO05D007066 3.6e-21 104.4 62 71.0
CARHR229200 Cardamine hirsuta HOM05D005528 ORTHO05D007066 4.7e-21 104.0 66 69.7
Sp7g20420 Schrenkiella parvula HOM05D005528 ORTHO05D007066 4.7e-21 104.0 66 69.7
THA.LOC104812987 Tarenaya hassleriana HOM05D005528 ORTHO05D007066 4.7e-21 104.0 66 68.2
ATR1128G032 Amborella trichopoda HOM05D005528 ORTHO05D007066 6.2e-21 103.6 66 69.7
Actinidia02324 Actinidia chinensis HOM05D005528 ORTHO05D007066 8.1e-21 103.2 68 66.2
Migut.M01382 Erythranthe guttata HOM05D005528 ORTHO05D007066 8.1e-21 103.2 66 69.7
Os04g0669600 Oryza sativa ssp. japonica HOM05D005528 ORTHO05D007066 8.1e-21 103.2 63 66.7
AL7G31320 Arabidopsis lyrata HOM05D005528 ORTHO05D007066 1.1e-20 102.8 66 69.7
CANSAT56G4535 Cannabis sativa HOM05D005528 ORTHO05D007066 1.1e-20 102.8 66 68.2
Carub.0007s1901 Capsella rubella HOM05D005528 ORTHO05D007066 1.1e-20 102.8 66 69.7
Carub.0007s1900 Capsella rubella HOM05D005528 ORTHO05D007066 1.4e-20 102.4 66 66.7
BcaNung02504 Brassica carinata HOM05D005528 ORTHO05D007066 3.1e-20 101.3 66 66.7
HPP92_004758 Vanilla planifolia HOM05D005528 ORTHO05D007066 3.1e-20 101.3 65 69.2
Zm00001eb066850 Zea mays HOM05D005528 ORTHO05D007066 3.1e-20 101.3 62 67.7
ATR0390G001 Amborella trichopoda HOM05D005528 ORTHO05D007066 4.0e-20 100.9 58 77.6
SEGI_30686 Sequoiadendron giganteum HOM05D005528 ORTHO05D007066 8.9e-20 99.8 66 63.6
Thhalv10023148m.g Eutrema salsugineum HOM05D005528 ORTHO05D007066 1.5e-19 99.0 66 66.7
BcaNung01697 Brassica carinata HOM05D005528 ORTHO05D007066 2.6e-19 98.2 67 61.2
vmacro03840 Vaccinium macrocarpon HOM05D005528 ORTHO05D007066 5.8e-19 97.1 65 66.2
CDE07G1265 Ceratophyllum demersum HOM05D005528 ORTHO05D007066 2.9e-18 94.7 65 63.1
Mapoly0191s0010 Marchantia polymorpha HOM05D005528 ORTHO05D007066 8.4e-18 93.2 61 63.9
Rhsim13G0147900 Rhododendron simsii HOM05D005528 ORTHO05D007066 2.4e-17 91.7 73 58.9
CDE04G2569 Ceratophyllum demersum HOM05D005528 ORTHO05D007066 1.7e-15 85.5 54 68.5
Pp3c15_7880 Physcomitrium patens HOM05D005528 ORTHO05D007066 6.6e-15 83.6 62 58.1
QL03p008473 Quercus lobata HOM05D005528 ORTHO05D007066 9.6e-14 79.7 43 83.7
Atru.chr1.2485 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-12 73.2 37 86.5
Haze_06901 Corylus avellana HOM05D005528 ORTHO05D007066 1.5e-06 55.8 30 80.0


User provided reference genes

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