Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 1.4e-128 463.0 241 100.0
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.1e-75 287.3 240 64.6
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 3.3e-69 265.8 242 61.2
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 9.6e-69 264.2 241 58.9
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.0e-67 258.8 246 61.4
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 9.9e-66 254.2 241 58.1
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 9.9e-66 254.2 240 57.5
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.3e-61 239.2 242 56.6
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.6e-60 236.9 243 55.1
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 3.6e-60 235.7 240 53.8
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.8e-59 233.4 232 52.2
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 2.4e-59 233.0 243 55.1
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 2.4e-59 233.0 254 50.0
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 5.3e-59 231.9 257 50.6
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 6.9e-59 231.5 253 51.4
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.0e-58 229.9 243 54.3
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 4.5e-58 228.8 241 53.5
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 5.8e-58 228.4 257 50.2
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 2.7e-55 219.5 231 51.5
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.0e-54 217.6 208 56.2
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 3.0e-54 216.1 250 50.8
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 3.0e-54 216.1 257 49.0
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 6.7e-54 214.9 288 45.1
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 4.3e-53 212.2 238 52.5
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 3.7e-52 209.1 232 50.9
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 1.4e-51 207.2 252 48.0
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.7e-49 200.3 178 60.1
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 3.8e-49 199.1 254 47.6
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 8.4e-49 198.0 240 47.5
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 1.4e-48 197.2 241 48.5
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 1.9e-48 196.8 240 46.7
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.2e-47 194.1 198 49.5
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 2.7e-47 193.0 235 50.2
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.3e-46 190.7 227 46.7
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 6.7e-46 188.3 236 47.5
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 1.9e-45 186.8 241 46.1
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.5e-45 186.4 245 45.7
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 4.3e-45 185.7 221 50.2
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 4.3e-45 185.7 243 50.6
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 7.4e-45 184.9 178 62.4
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 1.8e-43 180.3 249 46.6
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 5.3e-43 178.7 245 46.5
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 9.0e-43 177.9 235 46.8
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 1.2e-42 177.6 230 48.7
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.3e-41 174.1 235 46.4
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.1e-40 171.0 209 47.8
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 1.6e-39 167.2 223 46.2
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 2.1e-39 166.8 241 46.9
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.9e-38 162.5 241 46.1
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 3.3e-37 159.5 235 46.0
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 1.3e-36 157.5 228 45.6
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 1.3e-36 157.5 232 44.0
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 1.6e-36 157.1 221 48.9
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.4e-35 154.1 241 40.7
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 1.5e-34 150.6 209 44.5
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 4.5e-34 149.1 246 39.0
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.0e-33 147.9 232 42.2
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 2.9e-33 146.4 241 43.2
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 4.2e-32 142.5 241 40.2
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 2.3e-30 136.7 239 43.1
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 6.7e-30 135.2 187 47.1
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 8.8e-30 134.8 219 39.3
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 2.6e-29 133.3 167 46.1
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 8.2e-28 128.3 237 38.8
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 8.5e-25 118.2 185 41.1
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 1.1e-24 117.9 139 46.0
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 1.9e-24 117.1 232 39.2
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 4.2e-24 115.9 241 40.2
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 9.4e-24 114.8 203 37.4
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.2e-23 114.4 241 39.8
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 3.6e-23 112.8 175 40.6
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 4.7e-23 112.5 138 47.1
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 6.1e-23 112.1 136 46.3
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 1.4e-22 110.9 134 44.0
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.8e-22 110.5 135 43.7
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 2.3e-22 110.2 244 35.7
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 5.2e-22 109.0 212 35.4
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 6.7e-22 108.6 136 40.4
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 6.7e-22 108.6 134 42.5
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.5e-21 107.5 183 38.8
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.6e-21 106.7 189 37.6
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 3.3e-21 106.3 140 43.6
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 7.4e-21 105.1 250 34.8
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 7.4e-21 105.1 241 37.8
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 1.3e-20 104.4 139 42.4
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.2e-20 103.6 123 44.7
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 2.2e-20 103.6 177 38.4
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.7e-20 102.8 241 36.9
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 3.7e-20 102.8 214 33.2
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 4.8e-20 102.4 202 41.1
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 6.3e-20 102.1 249 33.7
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.2e-20 101.7 221 34.8
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.2e-20 101.7 221 34.8
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 1.1e-19 101.3 167 40.7
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.4e-19 100.9 139 39.6
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.8e-19 100.5 244 33.6
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.8e-19 100.5 189 38.1
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 3.1e-19 99.8 147 40.8
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 4.1e-19 99.4 254 33.5
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 5.3e-19 99.0 211 35.5
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 9.1e-19 98.2 214 35.5
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.2e-18 97.8 126 42.1
Cfa018567 Carpinus fangiana HOM05D000187 ORTHO05D000926 2.6e-18 96.7 87 64.4
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 3.5e-18 96.3 135 43.7
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 4.5e-18 95.9 254 33.1
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 7.7e-18 95.1 172 37.2
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 7.7e-18 95.1 142 43.0
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 1.0e-17 94.7 250 32.8
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 1.3e-17 94.4 133 41.4
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 1.2e-15 87.8 65 58.5
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 3.0e-14 83.2 131 39.7
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 3.3e-13 79.7 130 36.9
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 3.3e-13 79.7 205 31.2
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 1.3e-12 77.8 218 30.7
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 8.2e-12 75.1 210 31.4
Medtr3g088090 Medicago truncatula HOM05D005772 ORTHO05D006468 8.2e-12 75.1 106 43.4
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.1e-11 74.7 129 38.0
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 1.1e-11 74.7 129 38.0
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 1.1e-11 74.7 129 38.0
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 1.4e-11 74.3 239 28.0
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 1.8e-11 73.9 206 33.5
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 1.8e-11 73.9 205 33.2
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 4.1e-11 72.8 206 33.5
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 5.3e-11 72.4 243 28.0
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 7.0e-11 72.0 101 36.6
VMungo1309G3162 Vigna mungo HOM05D005772 ORTHO05D006468 7.0e-11 72.0 136 36.8
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 7.7e-10 68.6 47 66.0
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 2.9e-09 66.6 183 30.6
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 1.1e-08 64.7 168 31.0
Hund26793 Selenicereus undatus HOM05D002121 ORTHO05D004000 9.4e-08 61.6 129 32.6
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 3.6e-07 59.7 322 23.3
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 8.0e-07 58.5 207 30.9
FvH4_6g36610 Fragaria vesca HOM05D005772 ORTHO05D006468 2.3e-06 57.0 177 34.5
MBI06_g44497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 3.0e-06 56.6 35 77.1
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 3.0e-06 56.6 161 32.3


User provided reference genes

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