Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p063661 Quercus lobata HOM05D011274 ORTHO05D012136 0.0e+00 1338.6 654 100.0
QL08p063682 Quercus lobata HOM05D011274 ORTHO05D012136 0.0e+00 1121.7 654 85.6
QL08p063692 Quercus lobata HOM05D011274 ORTHO05D012136 0.0e+00 1083.9 590 90.7
QL08p064279 Quercus lobata HOM05D011274 ORTHO05D012136 4.8e-123 446.0 762 42.3
QL08p045355 Quercus lobata HOM05D011274 ORTHO05D012136 3.1e-98 363.6 711 40.5
QL12p011282 Quercus lobata HOM05D011274 ORTHO05D012136 8.0e-94 349.0 520 45.4
QL08p064561 Quercus lobata HOM05D011274 ORTHO05D012136 1.1e-82 312.0 469 44.6
QL07p010955 Quercus lobata HOM05D011274 ORTHO05D012136 5.1e-64 250.0 459 37.9
QL10p018154 Quercus lobata HOM05D011274 ORTHO05D012136 8.7e-64 249.2 487 38.2
QL07p010851 Quercus lobata HOM05D011274 ORTHO05D012136 1.8e-53 214.9 312 43.6
QL07p010661 Quercus lobata HOM05D011274 ORTHO05D012136 2.1e-49 201.4 290 42.8
QL08p016266 Quercus lobata HOM05D011274 ORTHO05D012136 5.3e-29 133.7 353 32.6
vmacro10955 Vaccinium macrocarpon HOM05D011274 ORTHO05D012136 1.9e-26 125.2 460 27.4
Rhsim06G0012900 Rhododendron simsii HOM05D011274 ORTHO05D012136 3.9e-24 117.5 477 26.6
Ah.09g227600 Amaranthus hybridus HOM05D037678 ORTHO05D012136 2.0e-23 115.2 459 26.1
AUR62032965 Chenopodium quinoa HOM05D037678 ORTHO05D012136 4.1e-21 107.5 456 26.1
Rhsim06G0014500 Rhododendron simsii HOM05D000059 ORTHO05D012136 3.4e-20 104.4 448 25.7
Ah.03g147960 Amaranthus hybridus HOM05D037678 ORTHO05D012136 1.3e-14 85.9 265 28.7
AUR62016891 Chenopodium quinoa HOM05D038025 ORTHO05D012136 5.0e-11 73.9 215 30.2
AUR62016894 Chenopodium quinoa HOM05D038025 ORTHO05D012136 5.0e-11 73.9 215 31.2
AUR62039049 Chenopodium quinoa HOM05D038025 ORTHO05D012136 5.0e-11 73.9 215 31.2
Ah.04g152630 Amaranthus hybridus HOM05D014492 ORTHO05D015818 8.5e-11 73.2 372 25.3
QL08p015662 Quercus lobata HOM05D011274 ORTHO05D012136 8.5e-11 73.2 132 36.4
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 8.5e-11 73.2 371 24.3
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 4.2e-10 70.9 418 24.9
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 7.2e-10 70.1 283 27.9
Thecc.03G305700 Theobroma cacao HOM05D017991 ORTHO05D020493 1.2e-09 69.3 412 22.6
Ah.04g152570 Amaranthus hybridus HOM05D014492 ORTHO05D015818 2.1e-09 68.6 371 25.6
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 6.1e-09 67.0 267 27.7
Ah.04g152650 Amaranthus hybridus HOM05D014492 ORTHO05D015818 3.9e-08 64.3 371 24.5
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 6.7e-08 63.5 269 25.7
DCAR_022881 Daucus carota HOM05D014492 ORTHO05D015818 2.2e-06 58.5 377 24.1


User provided reference genes

Program Settings