Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p058251 Quercus lobata HOM05D012386 ORTHO05D010611 7.6e-68 260.4 133 100.0
Haze_23085 Corylus avellana HOM05D012386 ORTHO05D002688 2.0e-12 76.3 94 47.9
QL02p014709 Quercus lobata HOM05D005504 ORTHO05D002688 2.7e-12 75.9 94 46.8
Duzib093G0882 Durio zibethinus HOM05D005504 ORTHO05D002688 7.8e-12 74.3 93 48.4
Manes.05G124000 Manihot esculenta HOM05D005504 ORTHO05D002688 1.9e-10 69.7 134 38.1
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 2.5e-10 69.3 121 37.2
QL06p003849 Quercus lobata HOM05D012386 ORTHO05D002688 5.6e-10 68.2 113 37.2
Cfa015598 Carpinus fangiana HOM05D012386 ORTHO05D002688 7.3e-10 67.8 108 34.3
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 7.3e-10 67.8 107 35.5
Medtr3g027145 Medicago truncatula HOM05D005504 ORTHO05D002688 1.2e-09 67.0 102 33.3
Medtr5g086750 Medicago truncatula HOM05D005504 ORTHO05D002688 1.2e-09 67.0 102 33.3
Medtr7g094380 Medicago truncatula HOM05D005504 ORTHO05D002688 1.2e-09 67.0 102 33.3
CANSAT78G0906 Cannabis sativa HOM05D012386 ORTHO05D002688 2.8e-09 65.9 94 40.4
Haze_00946 Corylus avellana HOM05D012386 ORTHO05D002688 2.8e-09 65.9 108 33.3
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 3.6e-09 65.5 133 33.1
CSS0010294 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 8.0e-09 64.3 130 35.4
Manes.03G183002 Manihot esculenta HOM05D012386 ORTHO05D002688 1.4e-08 63.5 92 40.2
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 2.3e-08 62.8 70 45.7
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 2.3e-08 62.8 92 38.0
CSS0015173 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 3.1e-08 62.4 119 36.1
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.0e-08 62.0 106 34.9
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 4.0e-08 62.0 110 33.6
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 5.2e-08 61.6 133 31.6
CSS0049663 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 6.8e-08 61.2 119 35.3
Nitab4.5_0006507g0030 Nicotiana tabacum HOM05D008574 ORTHO05D010611 6.8e-08 61.2 57 42.1
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.2e-07 60.5 130 32.3
COL.COLO4_28891 Corchorus olitorius HOM05D021688 ORTHO05D022442 1.2e-07 60.5 101 33.7
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 1.5e-07 60.1 108 35.2
CSS0003405 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.5e-07 60.1 133 30.1
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-07 59.3 70 47.1
Medtr8g060820 Medicago truncatula HOM05D005504 ORTHO05D002688 3.4e-07 58.9 90 31.1
Peaxi162Scf00001g00004 Petunia axillaris HOM05D008574 ORTHO05D010611 3.4e-07 58.9 83 34.9
Nitab4.5_0013708g0020 Nicotiana tabacum HOM05D008574 ORTHO05D010611 7.5e-07 57.8 57 40.4
COL.COLO4_32183 Corchorus olitorius HOM05D021688 ORTHO05D022442 1.3e-06 57.0 91 35.2
Nitab4.5_0028069g0010 Nicotiana tabacum HOM05D008574 ORTHO05D010611 1.3e-06 57.0 55 45.5
Nitab4.5_0005788g0020 Nicotiana tabacum HOM05D008574 ORTHO05D010611 2.2e-06 56.2 62 38.7
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.4e-06 54.7 97 33.0


User provided reference genes

Program Settings