Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p010601 Quercus lobata HOM05D003876 ORTHO05D004560 9.6e-278 959.5 485 100.0
QL08p010640 Quercus lobata HOM05D003876 ORTHO05D004560 2.9e-40 170.6 164 65.9
QL10p036392 Quercus lobata HOM05D003876 ORTHO05D004560 2.5e-36 157.5 127 72.4
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 2.0e-33 147.9 104 74.0
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 2.5e-31 141.0 118 63.6
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 1.0e-29 135.6 151 51.7
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 1.1e-18 99.0 127 41.7
QL08p010650 Quercus lobata HOM05D003876 ORTHO05D004560 3.1e-18 97.4 52 88.5
QL10p036338 Quercus lobata HOM05D003876 ORTHO05D004560 3.1e-18 97.4 52 88.5
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 4.1e-18 97.1 230 30.9
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 4.1e-18 97.1 115 49.6
QL08p010686 Quercus lobata HOM05D003876 ORTHO05D004560 4.1e-18 97.1 59 76.3
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 7.0e-18 96.3 260 33.5
QL08p010874 Quercus lobata HOM05D003876 ORTHO05D004560 9.1e-18 95.9 55 81.8
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 1.2e-17 95.5 113 45.1
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 1.5e-17 95.1 198 35.4
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 1.5e-17 95.1 201 34.3
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 2.6e-17 94.4 102 50.0
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 4.5e-17 93.6 100 48.0
QL08p010925 Quercus lobata HOM05D003876 ORTHO05D004560 4.5e-17 93.6 55 80.0
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 1.0e-16 92.4 104 50.0
QL08p010959 Quercus lobata HOM05D003876 ORTHO05D004560 2.2e-16 91.3 52 84.6
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 3.8e-16 90.5 112 49.1
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 5.0e-16 90.1 104 50.0
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 1.4e-15 88.6 104 46.2
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 1.9e-15 88.2 113 41.6
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 2.5e-15 87.8 257 28.0
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 3.2e-15 87.4 113 41.6
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 4.2e-15 87.0 160 35.0
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 5.5e-15 86.7 104 45.2
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 5.5e-15 86.7 112 41.1
Gohir.A05G328600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 9.4e-15 85.9 113 40.7
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 1.2e-14 85.5 104 45.2
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 1.2e-14 85.5 102 44.1
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 2.7e-14 84.3 104 44.2
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 2.7e-14 84.3 106 48.1
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 2.7e-14 84.3 261 28.7
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 6.1e-14 83.2 104 47.1
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 8.0e-14 82.8 112 42.9
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 2.3e-13 81.3 262 27.9
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 3.0e-13 80.9 118 39.0
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 3.0e-13 80.9 102 46.1
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 3.9e-13 80.5 114 44.7
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 1.5e-12 78.6 104 45.2
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 2.6e-12 77.8 104 43.3
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 3.3e-12 77.4 102 43.1
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 3.3e-12 77.4 104 41.3
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 4.4e-12 77.0 149 31.5
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 5.7e-12 76.6 114 43.9
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 7.4e-12 76.3 102 43.1
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 7.4e-12 76.3 102 43.1
Lj4C310T3 Lonicera japonica HOM05D003876 ORTHO05D004560 7.4e-12 76.3 103 42.7
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 9.7e-12 75.9 102 43.1
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 1.3e-11 75.5 114 42.1
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 1.3e-11 75.5 104 42.3
Phvul.006G043300 Phaseolus vulgaris HOM05D003876 ORTHO05D004560 2.2e-11 74.7 97 44.3
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 2.2e-11 74.7 252 25.4
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 2.8e-11 74.3 127 37.8
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 6.3e-11 73.2 107 40.2
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 8.2e-11 72.8 105 43.8
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 1.4e-10 72.0 107 40.2
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 1.8e-10 71.6 93 41.9
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 2.4e-10 71.2 114 36.0
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 3.1e-10 70.9 263 25.5
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 4.1e-10 70.5 267 24.3
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 4.1e-10 70.5 93 40.9
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 7.0e-10 69.7 110 42.7
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 9.1e-10 69.3 255 25.1
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 1.2e-09 68.9 251 23.9
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 1.6e-09 68.6 262 24.0
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 3.5e-09 67.4 264 25.8
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 1.7e-08 65.1 109 34.9
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 2.2e-08 64.7 113 35.4
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 3.8e-08 63.9 252 24.6
Solyc02g065500.4 Solanum lycopersicum HOM05D003876 ORTHO05D004560 5.0e-08 63.5 104 38.5
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 5.0e-08 63.5 104 38.5
Nitab4.5_0014432g0010 Nicotiana tabacum HOM05D003876 ORTHO05D004560 8.5e-08 62.8 112 39.3
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 4.2e-07 60.5 56 53.6
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 7.2e-07 59.7 248 24.2
Nitab4.5_0000071g0230 Nicotiana tabacum HOM05D003876 ORTHO05D004560 7.2e-07 59.7 191 31.4
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 7.2e-07 59.7 81 49.4
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 7.2e-07 59.7 81 49.4
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 1.6e-06 58.5 248 24.6
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 2.1e-06 58.2 236 25.0
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 2.7e-06 57.8 48 58.3
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 2.7e-06 57.8 48 58.3
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 2.7e-06 57.8 150 31.3
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 4.7e-06 57.0 104 33.7
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 4.7e-06 57.0 104 33.7
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 4.7e-06 57.0 112 34.8
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 6.1e-06 56.6 49 61.2


User provided reference genes

Program Settings