Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 3.2e-176 621.7 323 100.0
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 2.4e-107 392.9 204 98.0
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 5.0e-65 252.3 204 68.1
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 1.9e-64 250.4 204 67.6
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.5e-61 240.7 157 75.8
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.3e-60 237.7 157 75.8
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 8.6e-57 224.9 205 64.9
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 8.6e-57 224.9 205 64.9
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.9e-56 223.8 203 64.0
QL07p043329 Quercus lobata HOM05D006702 ORTHO05D008540 7.3e-56 221.9 116 100.0
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 8.1e-55 218.4 188 63.8
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 1.4e-51 207.6 204 57.8
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 3.2e-51 206.5 205 60.5
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 1.1e-48 198.0 187 64.2
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 2.5e-48 196.8 186 59.7
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 2.5e-48 196.8 186 60.8
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 2.5e-48 196.8 207 58.0
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 3.3e-48 196.4 214 57.0
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 7.3e-48 195.3 186 60.2
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 2.8e-47 193.4 158 66.5
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 8.1e-47 191.8 210 57.1
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 2.0e-45 187.2 205 54.1
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.9e-44 182.6 190 55.3
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 4.9e-44 182.6 152 62.5
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.9e-44 182.6 230 53.0
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 6.4e-44 182.2 194 55.7
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 4.2e-43 179.5 148 66.2
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.2e-42 177.9 134 68.7
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 1.6e-42 177.6 100 85.0
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 2.7e-42 176.8 204 53.4
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 6.0e-42 175.6 158 60.8
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 7.8e-42 175.3 147 64.6
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 7.8e-42 175.3 133 67.7
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.3e-41 174.5 109 77.1
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 2.3e-41 173.7 137 63.5
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 3.0e-41 173.3 146 61.0
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 3.9e-41 172.9 138 67.4
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 5.1e-41 172.6 106 79.2
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 6.6e-41 172.2 272 47.8
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 8.7e-41 171.8 111 73.0
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 1.5e-40 171.0 147 65.3
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.5e-40 171.0 103 74.8
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 1.9e-40 170.6 146 62.3
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 3.3e-40 169.9 195 52.3
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 3.3e-40 169.9 153 62.1
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.3e-40 169.5 94 86.2
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 7.3e-40 168.7 182 55.5
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 9.6e-40 168.3 152 60.5
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 9.6e-40 168.3 110 78.2
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 1.3e-39 167.9 158 60.1
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 1.6e-39 167.5 209 51.7
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 2.8e-39 166.8 100 76.0
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 2.8e-39 166.8 100 76.0
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 3.6e-39 166.4 149 61.1
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 6.2e-39 165.6 157 61.1
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 1.4e-38 164.5 154 59.7
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 1.4e-38 164.5 115 73.0
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 1.8e-38 164.1 97 81.4
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 6.9e-38 162.2 150 59.3
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 6.9e-38 162.2 150 59.3
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 6.9e-38 162.2 133 64.7
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 9.0e-38 161.8 147 59.9
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 9.0e-38 161.8 125 66.4
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 1.2e-37 161.4 150 58.7
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 1.2e-37 161.4 115 72.2
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 1.2e-37 161.4 155 56.8
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 1.5e-37 161.0 121 70.2
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 2.6e-37 160.2 142 63.4
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 2.6e-37 160.2 161 57.8
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 9.9e-37 158.3 150 58.7
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 9.9e-37 158.3 114 71.1
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 3.8e-36 156.4 153 56.9
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 8.4e-36 155.2 144 59.7
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 8.4e-36 155.2 108 71.3
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 8.4e-36 155.2 87 83.9
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.1e-35 154.8 138 60.9
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 1.4e-35 154.5 110 68.2
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 1.4e-35 154.5 119 65.5
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 1.4e-35 154.5 87 81.6
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 4.2e-35 152.9 153 56.9
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 5.4e-35 152.5 93 77.4
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 9.3e-35 151.8 102 70.6
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 2.7e-34 150.2 151 58.3
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.3e-33 147.9 171 50.9
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 2.3e-33 147.1 89 76.4
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 6.7e-33 145.6 99 66.7
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 1.1e-32 144.8 91 76.9
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 2.5e-32 143.7 87 75.9
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 7.4e-32 142.1 97 70.1
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 9.6e-32 141.7 87 74.7
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.6e-31 141.0 110 62.7
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 4.0e-30 136.3 134 59.0
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 4.5e-29 132.9 89 70.8
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 5.8e-29 132.5 81 79.0
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 5.8e-29 132.5 81 79.0
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 5.8e-29 132.5 132 58.3
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 6.4e-28 129.0 114 58.8
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 1.4e-27 127.9 87 67.8
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 5.5e-27 125.9 108 61.1
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 1.6e-26 124.4 147 51.0
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.0e-25 121.7 145 55.9
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.0e-25 121.7 145 55.9
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 1.3e-25 121.3 89 65.2
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.8e-25 120.9 89 65.2
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 3.0e-25 120.2 85 65.9
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 3.0e-25 120.2 91 64.8
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 5.1e-25 119.4 104 60.6
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.8e-23 113.6 107 52.3
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 6.2e-23 112.5 108 51.9
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 8.2e-23 112.1 125 50.4
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 6.9e-22 109.0 121 52.1
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 1.0e-20 105.1 87 57.5
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 2.9e-20 103.6 107 46.7
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 4.6e-18 96.3 97 54.6
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.0e-17 95.1 86 50.0
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 6.5e-12 75.9 155 38.1
CiPaw.10G130100 Carya illinoinensis HOM05D006702 ORTHO05D127951 5.5e-11 72.8 81 50.6
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 6.1e-10 69.3 84 40.5
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 7.9e-10 68.9 50 70.0
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.4e-09 68.2 40 77.5


User provided reference genes

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