Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 3.3e-92 341.7 166 100.0
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 3.6e-59 231.9 166 69.9
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 4.0e-58 228.4 166 68.1
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 5.2e-58 228.0 166 68.1
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 6.8e-58 227.6 166 68.1
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 2.0e-57 226.1 166 68.1
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 5.8e-57 224.6 164 67.7
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 5.8e-57 224.6 166 67.5
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.3e-56 223.4 166 66.3
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 1.7e-56 223.0 166 66.9
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 2.2e-56 222.6 165 67.3
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 4.9e-56 221.5 166 65.1
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 4.9e-56 221.5 166 67.5
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 4.9e-56 221.5 166 66.9
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 4.9e-56 221.5 166 66.9
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 6.4e-56 221.1 164 66.5
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 8.4e-56 220.7 166 66.3
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 1.1e-55 220.3 168 66.7
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 1.4e-55 219.9 164 65.9
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 1.4e-55 219.9 166 65.7
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 5.4e-55 218.0 166 66.3
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 7.1e-55 217.6 165 64.8
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 7.1e-55 217.6 166 65.7
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 9.3e-55 217.2 162 66.7
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 4.6e-54 214.9 165 64.2
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 4.6e-54 214.9 165 64.8
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 6.0e-54 214.5 165 64.2
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 6.0e-54 214.5 166 65.1
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.3e-53 213.4 166 64.5
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 1.7e-53 213.0 162 66.0
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.7e-53 213.0 166 62.7
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.3e-53 212.6 166 64.5
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 5.1e-53 211.5 166 63.9
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 5.1e-53 211.5 166 63.9
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 5.1e-53 211.5 164 65.9
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 5.1e-53 211.5 165 63.0
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 5.1e-53 211.5 162 64.8
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.1e-52 210.3 166 63.9
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.1e-52 210.3 166 65.1
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.9e-52 209.5 164 64.6
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 2.5e-52 209.1 166 63.9
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 3.3e-52 208.8 165 63.6
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 4.3e-52 208.4 166 61.4
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 5.6e-52 208.0 166 62.7
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 5.6e-52 208.0 166 62.7
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 5.6e-52 208.0 166 62.0
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 7.3e-52 207.6 165 62.4
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 7.3e-52 207.6 166 62.0
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 7.3e-52 207.6 166 60.8
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 9.6e-52 207.2 166 62.0
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.6e-51 206.5 160 63.1
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 2.1e-51 206.1 162 63.6
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 2.1e-51 206.1 166 60.8
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.8e-51 205.7 164 63.4
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 2.8e-51 205.7 166 60.8
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 2.8e-51 205.7 165 63.0
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 2.8e-51 205.7 165 63.0
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 3.6e-51 205.3 164 61.6
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 3.6e-51 205.3 164 62.8
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 3.6e-51 205.3 165 63.0
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 6.2e-51 204.5 164 62.8
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 1.4e-50 203.4 163 61.3
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 1.4e-50 203.4 163 61.3
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 1.4e-50 203.4 163 61.3
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 1.4e-50 203.4 163 61.3
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 1.4e-50 203.4 163 61.3
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 1.4e-50 203.4 165 61.8
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.4e-50 203.4 163 63.8
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.8e-50 203.0 165 61.8
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 3.1e-50 202.2 165 60.6
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 4.0e-50 201.8 164 62.8
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 4.0e-50 201.8 163 60.7
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 5.3e-50 201.4 160 61.9
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 5.3e-50 201.4 167 62.3
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 9.0e-50 200.7 164 61.0
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 9.0e-50 200.7 162 62.3
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 4.4e-49 198.4 165 60.6
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 5.8e-49 198.0 167 60.5
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 1.7e-48 196.4 162 60.5
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.7e-48 196.4 157 63.7
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 2.2e-48 196.1 162 58.0
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 3.8e-48 195.3 165 57.0
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 2.4e-47 192.6 165 59.4
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 2.7e-46 189.1 162 56.8
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 2.7e-46 189.1 165 58.8
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 1.3e-45 186.8 164 56.7
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 3.9e-45 185.3 164 56.1
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 6.6e-45 184.5 164 57.3
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 2.5e-44 182.6 149 63.1
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 4.3e-44 181.8 163 57.7
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 7.3e-44 181.0 162 54.3
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 7.6e-41 171.0 149 58.4
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.7e-40 169.9 162 53.1
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 2.4e-39 166.0 163 52.8
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 4.2e-39 165.2 162 49.4
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.2e-38 163.7 166 48.8
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 2.1e-38 162.9 160 50.6
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 6.9e-34 147.9 150 50.0
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 7.6e-33 144.4 170 45.9
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 1.7e-32 143.3 160 43.8
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 6.5e-32 141.4 146 53.4
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 7.1e-31 137.9 161 42.2
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.6e-30 136.7 79 81.0
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 8.2e-27 124.4 74 81.1
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.1e-26 124.0 167 39.5
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.1e-26 124.0 167 38.9
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 9.0e-26 120.9 74 78.4
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 4.5e-25 118.6 143 43.4
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 6.1e-22 108.2 156 37.8
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 1.0e-21 107.5 59 78.0
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 6.7e-21 104.8 56 78.6
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 8.7e-21 104.4 56 82.1
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 1.5e-20 103.6 52 84.6
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 4.3e-20 102.1 68 72.1
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.2e-17 94.0 58 69.0
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.2e-09 67.4 43 69.8
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.4e-09 65.9 43 67.4
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 4.2e-07 58.9 36 80.6


User provided reference genes

Program Settings