Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.6e-34 148.7 66 100.0
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 2.8e-23 111.3 66 69.7
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 9.1e-22 106.3 66 71.2
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 2.7e-21 104.8 66 71.2
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 1.0e-20 102.8 66 68.2
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.3e-20 102.4 66 63.6
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 2.3e-20 101.7 66 62.1
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 2.3e-20 101.7 66 62.1
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 2.9e-20 101.3 66 63.6
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 3.8e-20 100.9 64 67.2
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 5.0e-20 100.5 66 62.1
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 5.0e-20 100.5 66 62.1
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 6.6e-20 100.1 64 64.1
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.1e-19 99.4 64 67.2
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 1.1e-19 99.4 66 66.7
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.5e-19 99.0 64 67.2
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 1.9e-19 98.6 64 62.5
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 2.5e-19 98.2 64 70.3
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 4.2e-19 97.4 63 66.7
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 4.2e-19 97.4 64 62.5
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 5.5e-19 97.1 64 68.8
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 5.5e-19 97.1 63 65.1
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 7.2e-19 96.7 64 68.8
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 7.2e-19 96.7 64 68.8
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 7.2e-19 96.7 64 68.8
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 7.2e-19 96.7 65 64.6
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 9.5e-19 96.3 64 68.8
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 9.5e-19 96.3 64 68.8
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 9.5e-19 96.3 64 68.8
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 9.5e-19 96.3 64 68.8
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 9.5e-19 96.3 64 65.6
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 1.2e-18 95.9 64 68.8
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.2e-18 95.9 63 68.3
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 1.6e-18 95.5 63 61.9
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.6e-18 95.5 63 60.3
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.6e-18 95.5 63 60.3
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.6e-18 95.5 63 60.3
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.6e-18 95.5 63 60.3
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.6e-18 95.5 63 60.3
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.6e-18 95.5 63 60.3
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 2.1e-18 95.1 64 68.8
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 2.1e-18 95.1 65 63.1
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 2.1e-18 95.1 65 63.1
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 2.1e-18 95.1 64 67.2
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 2.1e-18 95.1 64 67.2
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 2.8e-18 94.7 62 69.4
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 2.8e-18 94.7 62 69.4
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 3.6e-18 94.4 64 64.1
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 3.6e-18 94.4 64 64.1
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 4.7e-18 94.0 65 61.5
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 4.7e-18 94.0 66 62.1
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 6.1e-18 93.6 64 65.6
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 8.0e-18 93.2 64 62.5
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 8.0e-18 93.2 64 62.5
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 1.0e-17 92.8 66 59.1
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 1.0e-17 92.8 59 66.1
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 1.4e-17 92.4 63 60.3
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 1.8e-17 92.0 64 59.4
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 2.3e-17 91.7 66 60.6
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 3.0e-17 91.3 57 68.4
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 4.0e-17 90.9 62 62.9
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 5.2e-17 90.5 58 67.2
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 5.2e-17 90.5 64 60.9
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 5.2e-17 90.5 62 64.5
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 6.8e-17 90.1 64 59.4
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 8.9e-17 89.7 64 60.9
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 8.9e-17 89.7 64 57.8
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 8.9e-17 89.7 64 59.4
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 1.2e-16 89.4 59 62.7
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.5e-16 89.0 59 66.1
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 2.0e-16 88.6 64 60.9
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 2.0e-16 88.6 59 62.7
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 2.0e-16 88.6 64 56.2
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 2.0e-16 88.6 64 59.4
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 2.0e-16 88.6 64 59.4
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 3.4e-16 87.8 63 57.1
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 5.7e-16 87.0 65 60.0
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 5.7e-16 87.0 65 60.0
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 5.7e-16 87.0 55 70.9
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 7.5e-16 86.7 58 62.1
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 7.5e-16 86.7 59 62.7
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 9.8e-16 86.3 64 57.8
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 1.7e-15 85.5 59 59.3
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 2.2e-15 85.1 64 56.2
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 3.7e-15 84.3 55 63.6
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 3.7e-15 84.3 58 60.3
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 4.9e-15 84.0 55 61.8
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 3.1e-14 81.3 66 59.1
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 4.1e-14 80.9 62 58.1
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 5.9e-13 77.0 63 52.4
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 1.7e-12 75.5 64 56.2
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 8.6e-12 73.2 59 54.2
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 4.3e-11 70.9 64 51.6
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 1.4e-09 65.9 44 59.1
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 3.1e-09 64.7 44 59.1
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 6.8e-09 63.5 54 50.0
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.5e-08 62.4 60 46.7
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.5e-08 62.4 60 46.7
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 3.4e-08 61.2 60 43.3
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 1.1e-06 56.2 36 69.4
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 3.2e-06 54.7 41 56.1
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 3.2e-06 54.7 41 56.1
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 4.1e-06 54.3 35 62.9
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 5.4e-06 53.9 41 56.1
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 7.0e-06 53.5 36 61.1


User provided reference genes

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