Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p013392 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-61 238.8 125 100.0
QL05p005727 Quercus lobata HOM05D000432 ORTHO05D000320 8.0e-35 150.6 117 61.5
QL04p012103 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-31 140.2 122 58.2
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 5.0e-29 131.3 120 55.8
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 8.6e-29 130.6 122 53.3
QL12p021712 Quercus lobata HOM05D000003 ORTHO05D000167 7.5e-25 117.5 122 51.6
QL07p036969 Quercus lobata HOM05D000003 ORTHO05D000167 1.7e-24 116.3 121 52.1
QL07p030179 Quercus lobata HOM05D000003 ORTHO05D000167 4.6e-22 108.2 121 46.3
QL03p050960 Quercus lobata HOM05D000003 ORTHO05D000167 7.3e-20 100.9 109 47.7
QL05p053348 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-19 100.1 122 45.9
QL06p011527 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-18 96.7 119 43.7
QL07p015398 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-18 96.7 100 51.0
QL11p032349 Quercus lobata HOM05D000003 ORTHO05D000167 5.2e-18 94.7 85 57.6
QL02p011178 Quercus lobata HOM05D001870 ORTHO05D001797 5.8e-17 91.3 93 57.0
QL05p082370 Quercus lobata HOM05D000003 ORTHO05D000167 8.3e-16 87.4 92 48.9
QL05p011804 Quercus lobata HOM05D000003 ORTHO05D000167 7.0e-15 84.3 82 56.1
QL02p081060 Quercus lobata HOM05D000003 ORTHO05D000167 4.6e-14 81.6 83 49.4
QL05p002207 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-13 79.3 104 39.4
QL09p052274 Quercus lobata HOM05D000021 ORTHO05D000010 2.3e-13 79.3 83 56.6
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 3.0e-13 79.0 70 57.1
QL04p086866 Quercus lobata HOM05D000003 ORTHO05D000167 3.0e-13 79.0 112 36.6
QL02p050812 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-13 77.4 123 42.3
QL05p012339 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-12 77.0 77 59.7
QL07p015088 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-11 72.8 105 41.0
EL10Ac6g14087 Beta vulgaris HOM05D000003 ORTHO05D000167 4.7e-11 71.6 109 36.7
QL02p100702 Quercus lobata HOM05D000003 ORTHO05D000167 4.7e-11 71.6 83 48.2
COL.COLO4_06144 Corchorus olitorius HOM05D009774 ORTHO05D000167 1.1e-10 70.5 111 35.1
QL06p015708 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-10 69.3 67 53.7
QL03p039168 Quercus lobata HOM05D000003 ORTHO05D000167 5.2e-10 68.2 68 52.9
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 8.9e-10 67.4 98 35.7
QL11p012871 Quercus lobata HOM05D000003 ORTHO05D000167 8.9e-10 67.4 94 45.7
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 4.4e-09 65.1 109 29.4
Sed0002375 Sechium edule HOM05D000003 ORTHO05D000167 4.4e-09 65.1 109 34.9
QL08p031025 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-09 64.3 108 33.3
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 1.3e-08 63.5 121 30.6
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.7e-08 63.2 118 30.5
QL05p054879 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-08 63.2 50 64.0
QL12p015728 Quercus lobata HOM05D000003 ORTHO05D000167 1.7e-08 63.2 125 32.8
COL.COLO4_05919 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.9e-08 62.4 121 31.4
QL08p006218 Quercus lobata HOM05D000003 ORTHO05D000167 2.9e-08 62.4 98 34.7
EL10Ac5g12505 Beta vulgaris HOM05D000003 ORTHO05D000167 4.9e-08 61.6 94 34.0
EL10Ac6g14583 Beta vulgaris HOM05D000003 ORTHO05D000167 8.3e-08 60.8 99 34.3
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 8.3e-08 60.8 121 29.8
AUR62001182 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.1e-07 60.5 111 34.2
QL02p037441 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-07 60.1 113 38.9
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 1.9e-07 59.7 113 31.0
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-07 59.7 109 27.5
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-07 59.7 119 36.1
QL03p051530 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-07 59.3 118 35.6
QL05p007523 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-07 59.3 94 35.1
Actinidia34033 Actinidia chinensis HOM05D000003 ORTHO05D000167 3.2e-07 58.9 113 35.4
QL04p037951 Quercus lobata HOM05D000003 ORTHO05D000167 5.4e-07 58.2 42 71.4
EL10Ac9g22665 Beta vulgaris HOM05D000003 ORTHO05D000167 7.1e-07 57.8 109 30.3
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 7.1e-07 57.8 111 32.4
COL.COLO4_23207 Corchorus olitorius HOM05D009774 ORTHO05D000167 7.1e-07 57.8 121 28.9
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 7.1e-07 57.8 119 35.3
QL07p011546 Quercus lobata HOM05D000003 ORTHO05D000167 7.1e-07 57.8 94 33.0
QL08p031765 Quercus lobata HOM05D000138 ORTHO05D000167 7.1e-07 57.8 38 68.4
EL10As6g23665 Beta vulgaris HOM05D000003 ORTHO05D000167 9.2e-07 57.4 100 34.0
Atru.chr1.3159 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-06 57.0 121 35.5
COL.COLO4_20671 Corchorus olitorius HOM05D000003 ORTHO05D000167 1.2e-06 57.0 104 30.8
Haze_17656 Corylus avellana HOM05D000003 ORTHO05D000167 1.2e-06 57.0 97 34.0
Haze_19506 Corylus avellana HOM05D000003 ORTHO05D000167 1.2e-06 57.0 97 34.0
Lj9P307T25 Lonicera japonica HOM05D000003 ORTHO05D000167 1.2e-06 57.0 99 32.3
QL02p023292 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-06 57.0 108 32.4
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-06 57.0 119 36.1
Atru.chr1.1375 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 121 32.2
Atru.chr12.998 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 120 30.0
Atru.chr2.2391 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 111 30.6
Atru.chr3.3369 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 109 34.9
Nn1g09632 Nelumbo nucifera HOM05D000003 ORTHO05D000167 1.6e-06 56.6 113 34.5
QL03p002835 Quercus lobata HOM05D000025 ORTHO05D000040 1.6e-06 56.6 60 48.3
QL06p008259 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-06 56.6 94 30.9
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-06 56.6 109 30.3
Atru.chr12.1685 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.2 109 29.4
COL.COLO4_16438 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.1e-06 56.2 125 28.8
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 2.1e-06 56.2 115 33.0
Gorai.004G088300 Gossypium raimondii HOM05D008766 ORTHO05D010886 2.1e-06 56.2 118 29.7
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 2.1e-06 56.2 108 35.2
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-06 56.2 119 34.5
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.1e-06 56.2 109 29.4
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.1e-06 56.2 109 29.4
TAR331G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 2.1e-06 56.2 109 25.7
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 2.7e-06 55.8 93 33.3
EL10Ac8g19164 Beta vulgaris HOM05D000003 ORTHO05D000167 2.7e-06 55.8 107 29.9
CSS0000735 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 2.7e-06 55.8 106 27.4
RcHm_v2.0_Chr4g0402201 Rosa chinensis HOM05D000003 ORTHO05D000004 2.7e-06 55.8 97 33.0
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.7e-06 55.8 109 30.3
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 3.5e-06 55.5 112 31.2
Atru.chr2.2135 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-06 55.5 112 30.4
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 3.5e-06 55.5 110 25.5
CANSAT01G1968 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-06 55.5 124 29.0
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 3.5e-06 55.5 114 29.8
Lj2P1109T58 Lonicera japonica HOM05D000003 ORTHO05D000167 3.5e-06 55.5 108 35.2
EL10Ac7g18097 Beta vulgaris HOM05D000003 ORTHO05D000167 4.6e-06 55.1 114 29.8
EL10Ac9g21339 Beta vulgaris HOM05D000003 ORTHO05D000167 4.6e-06 55.1 92 31.5
COL.COLO4_36420 Corchorus olitorius HOM05D001734 ORTHO05D006943 4.6e-06 55.1 105 26.7
Haze_25213 Corylus avellana HOM05D000335 ORTHO05D001251 4.6e-06 55.1 97 38.1
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 4.6e-06 55.1 119 31.9
CANSAT21G1403 Cannabis sativa HOM05D000003 ORTHO05D000004 6.0e-06 54.7 84 35.7
CiPaw.11G082900 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.0e-06 54.7 140 25.7
Manes.07G069794 Manihot esculenta HOM05D000003 ORTHO05D000167 6.0e-06 54.7 108 34.3
QL02p037922 Quercus lobata HOM05D000003 ORTHO05D000167 6.0e-06 54.7 104 34.6
QL11p000147 Quercus lobata HOM05D000003 ORTHO05D000167 6.0e-06 54.7 98 33.7
Sed0017704 Sechium edule HOM05D000003 ORTHO05D000167 6.0e-06 54.7 109 29.4
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-06 54.3 120 32.5
Atru.chr11.310 Acer truncatum HOM05D000003 ORTHO05D000167 7.8e-06 54.3 89 33.7
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-06 54.3 107 35.5
Atru.chr9.2211 Acer truncatum HOM05D000003 ORTHO05D000167 7.8e-06 54.3 121 29.8
Atru.chr9.909 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-06 54.3 104 31.7
Nn1g03437 Nelumbo nucifera HOM05D000003 ORTHO05D000167 7.8e-06 54.3 96 34.4
QL06p044722 Quercus lobata HOM05D000003 ORTHO05D000167 7.8e-06 54.3 56 46.4


User provided reference genes

Program Settings