Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p003630 Quercus lobata HOM05D007492 ORTHO05D009510 3.1e-55 218.4 122 100.0
CiPaw.10G035300 Carya illinoinensis HOM05D007492 ORTHO05D009510 3.9e-34 148.3 104 79.8
Cfa016781 Carpinus fangiana HOM05D007492 ORTHO05D009510 1.4e-31 139.8 100 81.0
Psat0s33g0080 Pisum sativum HOM05D007492 ORTHO05D009510 1.0e-26 123.6 118 61.0
Glyma.10G107400 Glycine max HOM05D007492 ORTHO05D009510 2.5e-25 119.0 118 60.2
Potri.006G046800 Populus trichocarpa HOM05D007492 ORTHO05D009510 7.3e-25 117.5 121 56.2
arahy.Tifrunner.gnm1.ann1.BXP26X Arachis hypogaea HOM05D007492 ORTHO05D009510 9.6e-25 117.1 118 58.5
Lalb_Chr21g0316561 Lupinus albus HOM05D007492 ORTHO05D009510 2.1e-24 115.9 109 59.6
Medtr1g052270 Medicago truncatula HOM05D007492 ORTHO05D009510 3.6e-24 115.2 118 57.6
arahy.Tifrunner.gnm1.ann1.7L65TE Arachis hypogaea HOM05D007492 ORTHO05D009510 4.8e-24 114.8 118 56.8
Manes.08G052300 Manihot esculenta HOM05D007492 ORTHO05D009510 4.8e-24 114.8 118 60.2
Sabra06G0032400 Salix brachista HOM05D007492 ORTHO05D009510 1.4e-23 113.2 103 62.1
Ca_12247_v3 Cicer arietinum L. HOM05D007492 ORTHO05D009510 2.4e-23 112.5 118 57.6
CANSAT80G1179 Cannabis sativa HOM05D007492 ORTHO05D009510 1.2e-22 110.2 96 67.7
Lj5g0022766 Lotus japonicus HOM05D007492 ORTHO05D009510 2.0e-22 109.4 115 58.3
Prupe.7G053700 Prunus persica HOM05D007492 ORTHO05D009510 2.6e-22 109.0 102 62.7
CANSAT80G0939 Cannabis sativa HOM05D007492 ORTHO05D009510 3.4e-22 108.6 96 66.7
Phvul.007G250800 Phaseolus vulgaris HOM05D007492 ORTHO05D009510 5.8e-22 107.8 92 65.2
TAR636G3489 Trochodendron aralioides HOM05D007492 ORTHO05D009510 5.8e-22 107.8 104 63.5
MD12G1082300 Malus domestica HOM05D007492 ORTHO05D009510 7.6e-22 107.5 106 57.5
PGR004G0419 Punica granatum HOM05D007492 ORTHO05D009510 9.9e-22 107.1 107 59.8
Sed0027371 Sechium edule HOM05D007492 ORTHO05D009510 1.3e-21 106.7 92 62.0
TPR.G19665 Trifolium pratense HOM05D007492 ORTHO05D009510 1.3e-21 106.7 133 51.1
Haze_19797 Corylus avellana HOM05D007492 ORTHO05D009510 3.8e-21 105.1 128 55.5
Duzib106G1025 Durio zibethinus HOM05D007492 ORTHO05D009510 4.9e-21 104.8 92 65.2
Gorai.006G135800 Gossypium raimondii HOM05D007492 ORTHO05D009510 8.4e-21 104.0 92 65.2
Haze_19793 Corylus avellana HOM05D007492 ORTHO05D009510 1.1e-20 103.6 128 54.7
Thecc.05G151900 Theobroma cacao HOM05D007492 ORTHO05D009510 1.4e-20 103.2 92 64.1
Gohir.D09G117400 Gossypium hirsutum HOM05D007492 ORTHO05D009510 2.4e-20 102.4 92 64.1
TWI77G0158 Tripterygium wilfordii HOM05D007492 ORTHO05D009510 2.4e-20 102.4 93 61.3
ClCG04G003670 Citrullus lanatus HOM05D007492 ORTHO05D009510 5.4e-20 101.3 91 63.7
Atru.chr1.1236 Acer truncatum HOM05D007492 ORTHO05D009510 9.3e-20 100.5 93 59.1
MSTRG.19841 Avicennia marina HOM05D007492 ORTHO05D009510 9.3e-20 100.5 96 63.5
Sc19g0006630 Simmondsia chinensis HOM05D007492 ORTHO05D009510 9.3e-20 100.5 97 57.7
Gohir.A09G121300 Gossypium hirsutum HOM05D007492 ORTHO05D009510 1.2e-19 100.1 92 64.1
Dinv39655 Davidia involucrata HOM05D007492 ORTHO05D009510 1.6e-19 99.8 92 62.0
Eucgr.K01714 Eucalyptus grandis HOM05D007492 ORTHO05D009510 1.6e-19 99.8 100 58.0
Eucgr.K02018 Eucalyptus grandis HOM05D007492 ORTHO05D009510 1.6e-19 99.8 100 58.0
Oeu023131.1 Olea europaea HOM05D007492 ORTHO05D009510 7.9e-19 97.4 103 59.2
Rhsim04G0106100 Rhododendron simsii HOM05D007492 ORTHO05D009510 1.7e-18 96.3 96 62.5
SalBow6G0030 Salvia bowleyana HOM05D007492 ORTHO05D009510 2.3e-18 95.9 96 58.3
SalBow6G0474 Salvia bowleyana HOM05D007492 ORTHO05D009510 2.3e-18 95.9 96 58.3
FAN05G0111 Fragaria x ananassa HOM05D007492 ORTHO05D009510 3.0e-18 95.5 101 56.4
Hma1.2p1_0005F.1_g004460 Hydrangea macrophylla HOM05D007492 ORTHO05D009510 3.9e-18 95.1 108 56.5
FAN14G3877 Fragaria x ananassa HOM05D007492 ORTHO05D009510 5.1e-18 94.7 101 56.4
CDE04G0450 Ceratophyllum demersum HOM05D007492 ORTHO05D009510 1.5e-17 93.2 95 60.0
Cc06_g18080 Coffea canephora HOM05D007492 ORTHO05D009510 1.5e-17 93.2 97 57.7
FAN02G2710 Fragaria x ananassa HOM05D007492 ORTHO05D009510 1.9e-17 92.8 101 54.5
RcHm_v2.0_Chr3g0483561 Rosa chinensis HOM05D007492 ORTHO05D009510 7.3e-17 90.9 101 53.5
Hund19134 Selenicereus undatus HOM05D007492 ORTHO05D009510 1.3e-16 90.1 95 55.8
Actinidia38130 Actinidia chinensis HOM05D007492 ORTHO05D009510 6.2e-16 87.8 94 54.3
SGA_v2.0_scaffold105G30374 Striga asiatica HOM05D007492 ORTHO05D009510 1.4e-15 86.7 96 57.3
GSVIVG01033234001 Vitis vinifera HOM05D007492 ORTHO05D009510 1.4e-15 86.7 82 63.4
AUR62026094 Chenopodium quinoa HOM05D007492 ORTHO05D009510 6.9e-15 84.3 98 54.1
HPP92_012551 Vanilla planifolia HOM05D007492 ORTHO05D009510 9.0e-15 84.0 100 52.0
AL5G38860 Arabidopsis lyrata HOM05D007492 ORTHO05D009510 1.5e-14 83.2 103 49.5
Cpa.g.sc1210.1 Carica papaya HOM05D007492 ORTHO05D009510 1.5e-14 83.2 97 52.6
HPP92_012476 Vanilla planifolia HOM05D007492 ORTHO05D009510 2.6e-14 82.4 100 51.0
Os07g0661700 Oryza sativa ssp. japonica HOM05D007492 ORTHO05D009510 3.4e-14 82.0 89 51.7
Sopen04g008400 Solanum pennellii HOM05D007492 ORTHO05D009510 3.4e-14 82.0 103 50.5
PGSC0003DMG400012711 Solanum tuberosum HOM05D007492 ORTHO05D009510 3.4e-14 82.0 103 50.5
Ciclev10005969m.g Citrus clementina HOM05D007492 ORTHO05D009510 4.5e-14 81.6 140 41.4
THA.LOC104802018 Tarenaya hassleriana HOM05D007492 ORTHO05D009510 4.5e-14 81.6 116 43.1
ATR0721G123 Amborella trichopoda HOM05D007492 ORTHO05D009510 5.8e-14 81.3 100 51.0
Solyc04g150113.1 Solanum lycopersicum HOM05D007492 ORTHO05D009510 5.8e-14 81.3 103 50.5
Migut.J01728 Erythranthe guttata HOM05D007492 ORTHO05D009510 1.7e-13 79.7 93 52.7
BcaB02g07611 Brassica carinata HOM05D007492 ORTHO05D009510 2.2e-13 79.3 96 49.0
Sp5g05280 Schrenkiella parvula HOM05D007492 ORTHO05D009510 2.9e-13 79.0 97 47.4
BraA07t29999Z Brassica rapa HOM05D007492 ORTHO05D009510 4.9e-13 78.2 96 47.9
Lsat_1_v5_gn_5_160860 Lactuca sativa HOM05D007492 ORTHO05D009510 4.9e-13 78.2 87 51.7
DCAR_013612 Daucus carota HOM05D007492 ORTHO05D009510 6.4e-13 77.8 103 49.5
BcaC08g44833 Brassica carinata HOM05D007492 ORTHO05D009510 8.4e-13 77.4 96 47.9
C06p24390 Brassica napus HOM05D007492 ORTHO05D009510 8.4e-13 77.4 96 47.9
Peaxi162Scf00130g00832 Petunia axillaris HOM05D007492 ORTHO05D009510 8.4e-13 77.4 98 51.0
Carub.0005s2417 Capsella rubella HOM05D007492 ORTHO05D009510 1.1e-12 77.0 103 46.6
CARHR167510 Cardamine hirsuta HOM05D007492 ORTHO05D009510 1.4e-12 76.6 94 47.9
Nitab4.5_0000826g0210 Nicotiana tabacum HOM05D007492 ORTHO05D009510 1.4e-12 76.6 103 49.5
vmacro09057 Vaccinium macrocarpon HOM05D007492 ORTHO05D009510 1.4e-12 76.6 85 56.5
A07p23340 Brassica napus HOM05D007492 ORTHO05D009510 1.9e-12 76.3 96 46.9
BolC6t37587H Brassica oleracea HOM05D007492 ORTHO05D009510 1.9e-12 76.3 96 46.9
Zm00001eb329920 Zea mays HOM05D007492 ORTHO05D009510 2.4e-12 75.9 91 49.5
MELO3C026338.2 Cucumis melo HOM05D007492 ORTHO05D009510 4.2e-12 75.1 62 66.1
Aa31LG10G12190 Aethionema arabicum HOM05D007492 ORTHO05D009510 2.1e-11 72.8 97 44.3
HanXRQChr13g0395971 Helianthus annuus HOM05D007492 ORTHO05D009510 7.9e-11 70.9 102 47.1
ECA248G1814 Erigeron canadensis HOM05D007492 ORTHO05D009510 2.3e-10 69.3 91 46.2
EL10Ac3g07135 Beta vulgaris HOM05D007492 ORTHO05D009510 1.1e-09 67.0 98 43.9
Aqoxy2G00252 Aquilegia oxysepala HOM05D007492 ORTHO05D009510 1.3e-08 63.5 97 45.4
Pp3c18_6860 Physcomitrium patens HOM05D007492 ORTHO05D009510 1.6e-08 63.2 94 46.8
AagrBONN_evm.TU.Sc2ySwM_228.377 Anthoceros agrestis HOM05D007492 ORTHO05D009510 6.2e-08 61.2 94 41.5
Mapoly0061s0071 Marchantia polymorpha HOM05D007492 ORTHO05D009510 9.0e-07 57.4 102 40.2
Zm00001eb195500 Zea mays HOM05D007492 ORTHO05D009510 1.2e-06 57.0 85 43.5
Zm00001eb380160 Zea mays HOM05D007492 ORTHO05D009510 1.5e-06 56.6 84 44.0
AUR62024507 Chenopodium quinoa HOM05D007492 ORTHO05D009510 4.5e-06 55.1 114 38.6
MBI13_g15315_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 1.0e-05 53.9 150 32.0


User provided reference genes

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