Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 0.0e+00 1260.4 633 100.0
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 0.0e+00 1117.8 672 83.3
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 3.0e-311 1071.2 628 83.0
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 1.1e-310 1069.3 627 82.6
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 2.0e-307 1058.5 626 82.9
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.9e-305 1052.0 627 81.8
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 3.5e-304 1047.7 627 81.3
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.3e-303 1045.8 629 81.7
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.1e-301 1038.5 624 81.1
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 3.6e-301 1037.7 628 80.6
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 4.7e-301 1037.3 628 80.4
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 2.4e-300 1035.0 628 80.4
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 5.2e-300 1033.9 626 81.2
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 4.4e-299 1030.8 625 81.1
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.1e-297 1026.2 609 82.6
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 1.4e-297 1025.8 631 79.6
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 1.9e-297 1025.4 571 87.6
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 4.2e-297 1024.2 632 79.7
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 3.9e-295 1017.7 630 80.2
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 8.7e-295 1016.5 631 78.4
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 4.3e-294 1014.2 628 80.9
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 7.3e-294 1013.4 628 78.7
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.4e-292 1009.2 628 80.4
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 2.9e-290 1001.5 627 78.5
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 3.8e-290 1001.1 627 78.0
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.1e-289 999.6 628 79.6
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 1.9e-289 998.8 627 78.8
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 2.4e-289 998.4 628 78.2
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 5.4e-289 997.3 628 80.1
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 7.8e-288 993.4 626 78.1
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 1.3e-287 992.6 626 77.5
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 3.0e-287 991.5 606 78.4
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 6.6e-287 990.3 633 77.3
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.9e-286 988.8 626 78.3
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 2.5e-286 988.4 627 77.5
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 1.1e-284 983.0 634 75.9
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 1.4e-284 982.6 623 76.4
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 4.5e-283 977.6 623 77.5
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 4.5e-283 977.6 623 76.4
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 9.9e-283 976.5 627 75.9
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.3e-279 966.1 625 73.9
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.8e-279 965.7 628 76.4
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 5.1e-279 964.1 625 74.9
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 1.1e-278 963.0 628 73.7
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 1.1e-278 963.0 625 74.6
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.1e-277 958.7 623 74.0
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 2.8e-277 958.4 631 74.3
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 2.8e-277 958.4 653 73.7
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 6.2e-277 957.2 627 74.2
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 6.2e-277 957.2 623 73.7
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 8.1e-277 956.8 639 74.2
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 3.1e-276 954.9 623 74.0
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 1.3e-274 949.5 628 74.2
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 8.4e-274 946.8 592 77.5
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 3.0e-271 938.3 663 71.5
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 9.6e-270 933.3 593 77.7
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.3e-269 932.9 588 76.9
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.6e-269 932.6 603 73.8
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 4.1e-268 927.9 629 73.4
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 1.2e-267 926.4 620 74.8
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.7e-266 922.5 631 72.4
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 3.8e-266 921.4 631 72.9
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.2e-264 916.4 624 71.6
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 3.5e-264 914.8 624 70.5
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 6.1e-264 914.1 625 71.7
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 2.5e-262 908.7 626 71.1
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.1e-260 903.3 624 70.0
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 3.3e-254 881.7 626 68.8
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 2.2e-253 879.0 583 72.9
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 2.8e-253 878.6 622 69.9
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 8.2e-253 877.1 627 70.5
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.4e-252 876.3 630 67.9
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.4e-252 876.3 570 73.2
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 1.2e-251 873.2 628 69.6
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 2.2e-250 869.0 632 67.4
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.1e-249 866.7 628 68.0
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 1.4e-249 866.3 634 68.3
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 1.6e-248 862.8 618 68.3
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.5e-246 856.3 629 68.4
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 2.6e-246 855.5 630 67.0
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 4.4e-246 854.7 589 70.6
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 5.3e-244 847.8 630 66.2
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 5.3e-244 847.8 629 66.9
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 1.5e-243 846.3 630 66.3
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 2.5e-241 839.0 626 66.9
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 5.5e-241 837.8 632 66.1
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 5.5e-241 837.8 632 66.1
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 4.2e-233 811.6 566 69.8
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 8.5e-226 787.3 627 62.0
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.2e-224 783.5 601 64.2
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 2.6e-214 749.2 440 82.7
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.3e-210 736.9 454 80.0
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 4.7e-200 701.8 396 88.4
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 9.5e-193 677.6 493 68.2
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 5.8e-190 668.3 448 72.3
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.1e-188 664.1 416 77.4
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 6.6e-186 654.8 634 52.4
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 1.8e-175 620.2 640 49.8
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 7.1e-164 581.6 418 70.6
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 5.1e-154 548.9 599 47.9
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 5.7e-153 545.4 399 67.7
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.2e-150 537.7 635 45.8
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.0e-141 508.1 604 47.7
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 5.5e-140 502.3 421 66.0
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 2.6e-113 413.7 272 77.6
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.3e-109 401.4 766 34.6
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.3e-53 215.3 179 59.2
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 5.3e-50 203.4 175 59.4
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 1.7e-48 198.4 163 62.6
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 2.4e-47 194.5 214 48.1
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 5.8e-41 173.3 151 56.3
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.3e-32 145.6 81 82.7
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.9e-23 115.2 79 75.9
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.4e-21 109.0 89 61.8
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.2e-17 95.9 81 60.5
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 4.8e-11 73.9 47 74.5
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 1.8e-10 72.0 39 82.1
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 9.1e-10 69.7 37 89.2
COL.COLO4_22600 Corchorus olitorius HOM05D002762 ORTHO05D155964 2.5e-07 61.6 51 60.8


User provided reference genes

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