Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 4.6e-128 461.5 270 100.0
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 4.3e-86 322.0 268 70.9
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 4.3e-86 322.0 268 70.9
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 5.0e-74 282.0 268 60.8
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 5.7e-70 268.5 242 59.9
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 3.7e-69 265.8 261 52.5
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 9.1e-68 261.2 270 48.9
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 9.1e-68 261.2 270 49.3
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 3.5e-67 259.2 267 50.6
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 2.2e-66 256.5 235 53.2
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 2.9e-66 256.1 270 53.0
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 1.1e-65 254.2 272 50.7
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 4.2e-65 252.3 270 50.4
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 3.6e-64 249.2 274 47.1
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 2.0e-62 243.4 270 47.4
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 3.3e-62 242.7 269 49.1
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 3.3e-62 242.7 260 51.9
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 7.4e-62 241.5 274 46.4
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.7e-61 239.2 274 49.3
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 4.8e-61 238.8 240 51.2
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 6.3e-61 238.4 242 52.1
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 6.3e-61 238.4 274 47.1
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 6.3e-61 238.4 274 47.1
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 8.2e-61 238.0 255 58.4
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 1.8e-60 236.9 236 52.1
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 3.1e-60 236.1 240 52.1
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 7.0e-60 235.0 242 52.1
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 1.6e-59 233.8 272 47.8
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 7.7e-59 231.5 280 47.9
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 1.3e-58 230.7 245 50.6
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 1.7e-58 230.3 246 50.0
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 1.7e-58 230.3 207 66.7
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 2.2e-58 229.9 245 50.2
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.8e-58 229.2 274 48.2
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 1.1e-57 227.6 266 46.6
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 5.5e-57 225.3 242 46.3
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 1.0e-55 221.1 249 50.6
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 1.8e-55 220.3 242 50.8
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 1.8e-55 220.3 271 52.0
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 2.3e-55 219.9 270 55.6
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 1.5e-54 217.2 272 45.2
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 3.4e-54 216.1 267 44.6
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 1.8e-52 210.3 246 44.7
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 1.9e-49 200.3 249 42.2
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 7.2e-49 198.4 239 45.2
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 3.0e-47 193.0 241 42.7
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 1.5e-46 190.7 269 42.8
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 7.5e-46 188.3 238 44.5
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 4.9e-45 185.7 243 42.8
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 1.4e-44 184.1 231 42.9
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 1.8e-44 183.7 241 41.9
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 5.4e-44 182.2 266 41.0
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 5.9e-43 178.7 247 42.9
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.9e-42 176.4 208 44.2
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 1.1e-41 174.5 244 37.7
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 1.2e-40 171.0 159 56.6
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 1.8e-39 167.2 261 44.4
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 5.2e-39 165.6 249 40.6
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 5.2e-39 165.6 255 37.3
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 6.8e-39 165.2 255 37.3
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 1.5e-38 164.1 240 39.2
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.6e-38 163.3 264 34.8
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 2.6e-38 163.3 257 35.4
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 3.4e-38 162.9 255 36.9
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 1.3e-37 161.0 274 47.8
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 1.7e-37 160.6 230 38.7
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 4.9e-37 159.1 244 38.5
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 1.8e-36 157.1 250 36.4
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 2.9e-34 149.8 271 36.2
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 6.6e-34 148.7 241 35.3
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 5.6e-33 145.6 244 36.1
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 7.3e-33 145.2 232 34.9
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 3.6e-32 142.9 240 35.4
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 1.0e-31 141.4 157 45.9
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 8.9e-31 138.3 163 42.9
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 2.6e-30 136.7 150 48.7
MD13G1194600 Malus domestica HOM05D007633 ORTHO05D008817 2.4e-28 130.2 162 48.1
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 7.0e-28 128.6 171 39.8
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 9.2e-28 128.3 157 43.3
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.0e-27 127.1 161 39.8
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 3.5e-27 126.3 123 48.8
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 4.6e-27 125.9 171 39.8
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 6.0e-27 125.6 150 44.7
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 6.0e-27 125.6 242 33.1
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 7.8e-27 125.2 262 35.9
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 8.6e-26 121.7 198 35.9
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 1.2e-19 101.3 154 39.0
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 1.6e-19 100.9 150 36.7
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 1.7e-18 97.4 75 50.7
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 2.3e-18 97.1 154 36.4
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 5.1e-18 95.9 171 35.1
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 5.1e-18 95.9 236 29.7
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 6.6e-18 95.5 238 26.9
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 1.9e-17 94.0 162 33.3
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 5.6e-17 92.4 154 35.7
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 3.6e-16 89.7 173 32.9
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 4.7e-16 89.4 104 47.1
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 8.1e-16 88.6 264 29.2
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 6.8e-15 85.5 151 33.8
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 1.5e-14 84.3 150 32.7
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 1.5e-14 84.3 140 32.9
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 1.5e-14 84.3 140 32.9
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 2.6e-14 83.6 150 32.7
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 2.6e-14 83.6 150 32.7
BcaC05g24389 Brassica carinata HOM05D012198 ORTHO05D008817 1.3e-13 81.3 152 32.9
TWI73G0180 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 2.4e-12 77.0 100 45.0
Os10g0430800 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 3.5e-11 73.2 156 30.8
MD13G1194800 Malus domestica HOM05D007633 ORTHO05D008817 1.1e-09 68.2 50 66.0
Sabra08G0117600 Salix brachista HOM05D007633 ORTHO05D008817 1.1e-09 68.2 90 44.4
Os10g0430700 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 4.3e-09 66.2 152 29.6
DCAR_030642 Daucus carota HOM05D007633 ORTHO05D008817 7.3e-09 65.5 107 38.3
MD07G1251800 Malus domestica HOM05D007633 ORTHO05D008817 9.6e-09 65.1 51 60.8
AagrBONN_evm.TU.Sc2ySwM_117.1122 Anthoceros agrestis HOM05D020856 ORTHO05D018339 2.1e-08 63.9 142 30.3
Cpa.g.sc58.94 Carica papaya HOM05D007633 ORTHO05D008817 2.8e-08 63.5 52 50.0
Cpa.g.sc58.92 Carica papaya HOM05D000003 ORTHO05D000004 4.7e-08 62.8 52 55.8
MD13G1194700 Malus domestica HOM05D007633 ORTHO05D008817 3.1e-07 60.1 71 46.5
Lalb_Chr01g0013111 Lupinus albus HOM05D007633 ORTHO05D008817 1.2e-06 58.2 68 45.6


User provided reference genes

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