Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p089141 Quercus lobata HOM05D003452 ORTHO05D004046 4.3e-101 371.3 185 100.0
QL05p089247 Quercus lobata HOM05D003452 ORTHO05D004046 1.9e-64 249.6 181 75.7
QL12p009800 Quercus lobata HOM05D003452 ORTHO05D004046 4.8e-60 235.0 243 56.8
CiPaw.02G006400 Carya illinoinensis HOM05D003452 ORTHO05D004046 2.0e-50 203.0 233 50.6
Rhsim10G0113000 Rhododendron simsii HOM05D003452 ORTHO05D004046 4.5e-50 201.8 169 60.4
Dinv26859 Davidia involucrata HOM05D003452 ORTHO05D004046 1.0e-49 200.7 225 50.2
Haze_15356 Corylus avellana HOM05D003452 ORTHO05D004046 2.9e-49 199.1 215 53.0
Cfa004056 Carpinus fangiana HOM05D003452 ORTHO05D004046 3.8e-49 198.7 226 50.9
AUR62038246 Chenopodium quinoa HOM05D003452 ORTHO05D004046 1.9e-48 196.4 169 58.0
Cpa.g.sc55.98 Carica papaya HOM05D003452 ORTHO05D004046 1.3e-46 190.3 166 58.4
FAN23G2911 Fragaria x ananassa HOM05D003452 ORTHO05D004046 8.7e-46 187.6 216 48.1
Actinidia36467 Actinidia chinensis HOM05D003452 ORTHO05D004046 9.7e-45 184.1 233 44.6
FAN19G1474 Fragaria x ananassa HOM05D003452 ORTHO05D004046 9.7e-45 184.1 216 47.7
Lj4A155G89 Lonicera japonica HOM05D003452 ORTHO05D004046 9.7e-45 184.1 231 46.8
Actinidia12025 Actinidia chinensis HOM05D003452 ORTHO05D004046 2.2e-44 183.0 233 43.3
Lalb_Chr05g0226301 Lupinus albus HOM05D003452 ORTHO05D004046 2.4e-43 179.5 233 43.3
vmacro05258 Vaccinium macrocarpon HOM05D003452 ORTHO05D004046 2.4e-43 179.5 243 41.6
Hma1.2p1_0017F.1_g011830 Hydrangea macrophylla HOM05D003452 ORTHO05D004046 3.1e-43 179.1 226 44.7
GSVIVG01000228001 Vitis vinifera HOM05D003452 ORTHO05D004046 5.3e-43 178.3 233 43.8
Thecc.01G062600 Theobroma cacao HOM05D003452 ORTHO05D004046 6.9e-43 177.9 225 47.1
Lj7A76T78 Lonicera japonica HOM05D003452 ORTHO05D004046 1.5e-42 176.8 228 45.6
FvH4_1g16590 Fragaria vesca HOM05D003452 ORTHO05D004046 2.0e-42 176.4 236 43.6
CAN.G1778.2 Capsicum annuum HOM05D003452 ORTHO05D004046 2.6e-42 176.0 226 43.4
Ciclev10025436m.g Citrus clementina HOM05D003452 ORTHO05D004046 2.6e-42 176.0 223 45.7
TAR381G1138 Trochodendron aralioides HOM05D003452 ORTHO05D004046 3.4e-42 175.6 223 43.5
FAN26G2566 Fragaria x ananassa HOM05D003452 ORTHO05D004046 5.9e-42 174.9 198 49.0
RcHm_v2.0_Chr2g0106501 Rosa chinensis HOM05D003452 ORTHO05D004046 7.7e-42 174.5 225 46.7
TWI73G0964 Tripterygium wilfordii HOM05D003452 ORTHO05D004046 1.3e-41 173.7 223 45.3
Lalb_Chr09g0323371 Lupinus albus HOM05D003452 ORTHO05D004046 5.0e-41 171.8 239 42.3
Atru.chr3.258 Acer truncatum HOM05D003452 ORTHO05D004046 8.5e-41 171.0 224 45.5
Lj7A83T65 Lonicera japonica HOM05D003452 ORTHO05D004046 1.4e-40 170.2 228 45.2
Lsat_1_v5_gn_3_90381 Lactuca sativa HOM05D003452 ORTHO05D004046 1.9e-40 169.9 207 47.8
Glyma.17G167900 Glycine max HOM05D003452 ORTHO05D004046 3.2e-40 169.1 235 42.1
Lalb_Chr16g0378691 Lupinus albus HOM05D003452 ORTHO05D004046 3.2e-40 169.1 227 43.2
Prupe.6G230000 Prunus persica HOM05D003452 ORTHO05D004046 3.2e-40 169.1 226 45.1
Nitab4.5_0001297g0030 Nicotiana tabacum HOM05D003452 ORTHO05D004046 5.5e-40 168.3 227 43.6
Hund13910 Selenicereus undatus HOM05D003452 ORTHO05D004046 5.5e-40 168.3 243 39.9
FAN28G2117 Fragaria x ananassa HOM05D003452 ORTHO05D004046 7.2e-40 167.9 263 39.5
Manes.12G151100 Manihot esculenta HOM05D003452 ORTHO05D004046 7.2e-40 167.9 220 45.9
PGSC0003DMG400010461 Solanum tuberosum HOM05D003452 ORTHO05D004046 7.2e-40 167.9 226 42.5
ECA246G2207 Erigeron canadensis HOM05D003452 ORTHO05D004046 1.2e-39 167.2 226 43.4
CSS0049847 Camellia sinensis var. sinensis HOM05D003452 ORTHO05D004046 1.6e-39 166.8 227 44.1
Lj1g0003061 Lotus japonicus HOM05D003452 ORTHO05D004046 2.1e-39 166.4 235 42.6
Sopen10g033610 Solanum pennellii HOM05D003452 ORTHO05D004046 2.1e-39 166.4 226 42.0
Solyc10g084160.2 Solanum lycopersicum HOM05D003452 ORTHO05D004046 3.6e-39 165.6 226 42.0
Lj5g0005600 Lotus japonicus HOM05D003452 ORTHO05D004046 1.4e-38 163.7 235 42.1
Nitab4.5_0001192g0060 Nicotiana tabacum HOM05D003452 ORTHO05D004046 1.4e-38 163.7 227 41.9
Cc07_g06390 Coffea canephora HOM05D003452 ORTHO05D004046 1.8e-38 163.3 226 40.3
Medtr1g023955 Medicago truncatula HOM05D003452 ORTHO05D004046 1.8e-38 163.3 229 42.4
Eucgr.I00803 Eucalyptus grandis HOM05D003452 ORTHO05D004046 3.9e-38 162.2 226 41.6
Ca_13403_v3 Cicer arietinum L. HOM05D003452 ORTHO05D004046 5.1e-38 161.8 234 41.0
MD15G1287900 Malus domestica HOM05D003452 ORTHO05D004046 5.1e-38 161.8 225 43.6
Peaxi162Scf00472g00008 Petunia axillaris HOM05D003452 ORTHO05D004046 5.1e-38 161.8 226 41.2
TPR.G34364 Trifolium pratense HOM05D003452 ORTHO05D004046 5.1e-38 161.8 229 41.9
Gohir.A11G230304 Gossypium hirsutum HOM05D003452 ORTHO05D004046 6.7e-38 161.4 243 39.5
Gohir.D11G232800 Gossypium hirsutum HOM05D003452 ORTHO05D004046 6.7e-38 161.4 243 39.5
Gorai.003G066000 Gossypium raimondii HOM05D003452 ORTHO05D004046 6.7e-38 161.4 243 39.5
Ca_13416_v3 Cicer arietinum L. HOM05D003452 ORTHO05D004046 1.1e-37 160.6 237 40.5
Duzib147G1492 Durio zibethinus HOM05D003452 ORTHO05D004046 1.5e-37 160.2 223 43.5
DCAR_010856 Daucus carota HOM05D003452 ORTHO05D004046 2.0e-37 159.8 226 41.6
HanXRQChr11g0348391 Helianthus annuus HOM05D003452 ORTHO05D004046 2.0e-37 159.8 227 42.7
Potri.007G048000 Populus trichocarpa HOM05D003452 ORTHO05D004046 2.6e-37 159.5 235 40.4
Sabra07G0043000 Salix brachista HOM05D003452 ORTHO05D004046 5.7e-37 158.3 248 38.7
PGR004G0567 Punica granatum HOM05D003452 ORTHO05D004046 7.4e-37 157.9 225 43.1
CSS0011108 Camellia sinensis var. sinensis HOM05D003452 ORTHO05D004046 9.7e-37 157.5 203 45.3
Sed0010356 Sechium edule HOM05D003452 ORTHO05D004046 9.7e-37 157.5 225 40.9
ClCG01G017040 Citrullus lanatus HOM05D003452 ORTHO05D004046 1.7e-36 156.8 224 42.4
Oeu049888.1 Olea europaea HOM05D003452 ORTHO05D004046 1.7e-36 156.8 223 41.3
VMungo0251G0295 Vigna mungo HOM05D003452 ORTHO05D004046 1.7e-36 156.8 229 39.3
CsaV3_6G043510 Cucumis sativus L. HOM05D003452 ORTHO05D004046 2.8e-36 156.0 224 42.4
Aqoxy2G00584 Aquilegia oxysepala HOM05D003452 ORTHO05D004046 4.8e-36 155.2 224 42.0
Phvul.003G240600 Phaseolus vulgaris HOM05D003452 ORTHO05D004046 4.8e-36 155.2 235 38.3
AUR62003930 Chenopodium quinoa HOM05D003452 ORTHO05D004046 6.3e-36 154.8 252 37.7
MD02G1178000 Malus domestica HOM05D003452 ORTHO05D004046 1.1e-35 154.1 225 42.7
Psat6g004200 Pisum sativum HOM05D003452 ORTHO05D004046 1.1e-35 154.1 227 40.5
Oeu008437.1 Olea europaea HOM05D003452 ORTHO05D004046 1.8e-35 153.3 223 41.3
Aqoxy6G02896 Aquilegia oxysepala HOM05D003452 ORTHO05D004046 2.4e-35 152.9 220 41.4
Nn5g30393 Nelumbo nucifera HOM05D003452 ORTHO05D004046 2.4e-35 152.9 223 39.5
CAN.G1778.3 Capsicum annuum HOM05D003452 ORTHO05D004046 3.1e-35 152.5 225 41.8
PSO447G0386 Papaver somniferum HOM05D003452 ORTHO05D004046 5.3e-35 151.8 229 40.2
MELO3C007581.2 Cucumis melo HOM05D003452 ORTHO05D004046 1.2e-34 150.6 224 41.1
MSTRG.2860 Avicennia marina HOM05D003452 ORTHO05D004046 5.9e-34 148.3 226 38.5
PSO700G0024 Papaver somniferum HOM05D003452 ORTHO05D004046 5.9e-34 148.3 229 39.3
Sc18g0004770 Simmondsia chinensis HOM05D003452 ORTHO05D004046 6.5e-33 144.8 223 39.9
EL10Ac6g15698 Beta vulgaris HOM05D003452 ORTHO05D004046 5.5e-32 141.7 248 36.3
Migut.H00401 Erythranthe guttata HOM05D003452 ORTHO05D004046 5.5e-32 141.7 228 38.6
ATR0006G091 Amborella trichopoda HOM05D003452 ORTHO05D004046 7.2e-32 141.4 227 37.4
FAN26G1073 Fragaria x ananassa HOM05D003452 ORTHO05D004046 9.4e-32 141.0 159 49.7
SGA_v2.0_scaffold15G07361 Striga asiatica HOM05D003452 ORTHO05D004046 1.2e-31 140.6 225 36.9
Lsat_1_v5_gn_3_90320 Lactuca sativa HOM05D003452 ORTHO05D004046 4.7e-31 138.7 167 48.5
THA.LOC104805170 Tarenaya hassleriana HOM05D003452 ORTHO05D004046 5.2e-30 135.2 226 36.7
THA.LOC104827394 Tarenaya hassleriana HOM05D003452 ORTHO05D004046 5.2e-30 135.2 226 36.7
CDE10G0659 Ceratophyllum demersum HOM05D003452 ORTHO05D004046 2.0e-29 133.3 217 38.7
COL.COLO4_16245 Corchorus olitorius HOM05D003452 ORTHO05D004046 5.7e-29 131.7 131 55.7
Os04g0650600 Oryza sativa ssp. japonica HOM05D003452 ORTHO05D004046 5.7e-29 131.7 228 35.1
Thhalv10003942m.g Eutrema salsugineum HOM05D003452 ORTHO05D004046 3.7e-28 129.0 232 35.8
Nn1g04732 Nelumbo nucifera HOM05D003452 ORTHO05D004046 4.8e-28 128.6 228 35.5
HPP92_021980 Vanilla planifolia HOM05D003452 ORTHO05D004046 1.8e-27 126.7 232 34.1
Aa31LG1G15770 Aethionema arabicum HOM05D003452 ORTHO05D004046 5.3e-27 125.2 225 35.1
PSO210G5185 Papaver somniferum HOM05D003452 ORTHO05D004046 7.0e-27 124.8 225 35.6
Nitab4.5_0001238g0020 Nicotiana tabacum HOM05D003452 ORTHO05D004046 1.6e-26 123.6 181 42.0
PSO170G4023 Papaver somniferum HOM05D003452 ORTHO05D004046 2.0e-26 123.2 226 34.5
PSO210G6200 Papaver somniferum HOM05D003452 ORTHO05D004046 4.5e-26 122.1 243 33.7
BcaC06g34807 Brassica carinata HOM05D001905 ORTHO05D001820 7.7e-26 121.3 232 33.2
C07p24440 Brassica napus HOM05D001905 ORTHO05D001820 7.7e-26 121.3 232 33.2
BraA09t39792Z Brassica rapa HOM05D003452 ORTHO05D004046 1.7e-25 120.2 244 32.0
AL6G15430 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 2.2e-25 119.8 238 34.0
BolC7t42964H Brassica oleracea HOM05D001905 ORTHO05D001820 2.9e-25 119.4 237 32.5
AL5G30220 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 5.0e-25 118.6 226 34.5
AT3G50100 Arabidopsis thaliana HOM05D003452 ORTHO05D004046 5.0e-25 118.6 226 33.6
Sp2g29430 Schrenkiella parvula HOM05D003452 ORTHO05D004046 6.5e-25 118.2 232 32.8
BcaB02g09943 Brassica carinata HOM05D003452 ORTHO05D004046 1.1e-24 117.5 232 31.9
Sp7g29190 Schrenkiella parvula HOM05D003452 ORTHO05D004046 1.1e-24 117.5 240 34.2
Zm00001eb068290 Zea mays HOM05D003452 ORTHO05D004046 1.1e-24 117.5 216 34.7
A09p43220 Brassica napus HOM05D003452 ORTHO05D004046 1.5e-24 117.1 244 31.1
FvH4_4g28290 Fragaria vesca HOM05D003452 ORTHO05D004046 1.5e-24 117.1 138 51.4
CARHR280390 Cardamine hirsuta HOM05D003452 ORTHO05D004046 1.9e-24 116.7 232 32.3
PSO210G3568 Papaver somniferum HOM05D003452 ORTHO05D004046 1.9e-24 116.7 253 31.6
FAN12G4129 Fragaria x ananassa HOM05D003452 ORTHO05D004046 3.2e-24 115.9 136 51.5
AT5G67240 Arabidopsis thaliana HOM05D003452 ORTHO05D004046 4.2e-24 115.5 236 33.1
BolC8t50143H Brassica oleracea HOM05D003452 ORTHO05D004046 5.5e-24 115.2 244 30.7
Thhalv10011012m.g Eutrema salsugineum HOM05D003452 ORTHO05D004046 5.5e-24 115.2 239 32.2
BcaC07g39477 Brassica carinata HOM05D003452 ORTHO05D004046 7.2e-24 114.8 244 30.7
AL8G44100 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 9.4e-24 114.4 242 32.2
AT5G05540 Arabidopsis thaliana HOM05D003452 ORTHO05D004046 9.4e-24 114.4 238 32.8
A07p16710 Brassica napus HOM05D001905 ORTHO05D001820 1.6e-23 113.6 232 31.9
AL5G30210 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 2.1e-23 113.2 216 35.6
C08p25210 Brassica napus HOM05D003452 ORTHO05D004046 2.1e-23 113.2 242 30.6
AT3G50090 Arabidopsis thaliana HOM05D003452 ORTHO05D004046 2.7e-23 112.8 236 32.6
SEGI_05143 Sequoiadendron giganteum HOM05D003452 ORTHO05D004046 4.7e-23 112.1 226 29.2
CARHR207730 Cardamine hirsuta HOM05D003452 ORTHO05D004046 8.0e-23 111.3 240 31.7
Sp7g29060 Schrenkiella parvula HOM05D003452 ORTHO05D004046 8.0e-23 111.3 245 32.7
Carub.0005s1644 Capsella rubella HOM05D003452 ORTHO05D004046 1.4e-22 110.5 223 32.7
Sp5g12020 Schrenkiella parvula HOM05D003452 ORTHO05D004046 2.3e-22 109.8 226 31.0
Carub.0006s0444 Capsella rubella HOM05D003452 ORTHO05D004046 6.7e-22 108.2 238 30.3
Carub.0008s2727 Capsella rubella HOM05D003452 ORTHO05D004046 8.8e-22 107.8 236 30.9
Thhalv10024938m.g Eutrema salsugineum HOM05D003452 ORTHO05D004046 2.0e-21 106.7 245 31.0
BcaC09g50006 Brassica carinata HOM05D003452 ORTHO05D004046 4.4e-21 105.5 214 31.3
BcaB01g00639 Brassica carinata HOM05D003452 ORTHO05D004046 9.7e-21 104.4 269 27.9
A01p24270 Brassica napus HOM05D003452 ORTHO05D004046 1.7e-20 103.6 216 31.0
unitig_744.g24372 Utricularia gibba HOM05D003452 ORTHO05D004046 3.7e-20 102.4 199 34.7
Thhalv10010950m.g Eutrema salsugineum HOM05D003452 ORTHO05D004046 1.1e-19 100.9 224 30.8
BcaC09g50010 Brassica carinata HOM05D003452 ORTHO05D004046 1.4e-19 100.5 219 31.5
C01p30070 Brassica napus HOM05D003452 ORTHO05D004046 1.4e-19 100.5 219 31.5
BolC1t02949H Brassica oleracea HOM05D003452 ORTHO05D004046 1.4e-19 100.5 219 31.5
BolC1t02953H Brassica oleracea HOM05D003452 ORTHO05D004046 1.4e-19 100.5 227 29.5
BraA01t02340Z Brassica rapa HOM05D003452 ORTHO05D004046 5.3e-19 98.6 229 29.3
C01p30090 Brassica napus HOM05D003452 ORTHO05D004046 1.0e-17 94.4 243 27.6
CARHR239210 Cardamine hirsuta HOM05D003452 ORTHO05D004046 6.5e-17 91.7 239 30.5
CARHR153780 Cardamine hirsuta HOM05D003452 ORTHO05D004046 7.2e-16 88.2 118 39.8
Mapoly0033s0099 Marchantia polymorpha HOM05D003452 ORTHO05D004046 4.0e-14 82.4 226 25.2
BraA07t29398Z Brassica rapa HOM05D003452 ORTHO05D004046 3.4e-13 79.3 90 46.7
CDE10G0894 Ceratophyllum demersum HOM05D003452 ORTHO05D004046 9.8e-13 77.8 137 38.7
PSO210G7714 Papaver somniferum HOM05D003452 ORTHO05D004046 1.7e-12 77.0 183 31.1
BraA07t29394Z Brassica rapa HOM05D001905 ORTHO05D001820 2.8e-12 76.3 88 44.3
Nitab4.5_0007967g0050 Nicotiana tabacum HOM05D003452 ORTHO05D004046 2.8e-12 76.3 59 62.7
PSO170G2906 Papaver somniferum HOM05D003452 ORTHO05D004046 3.1e-11 72.8 82 46.3
CARHR216260 Cardamine hirsuta HOM05D003452 ORTHO05D004046 7.0e-11 71.6 127 33.1
AL6G18830 Arabidopsis lyrata HOM05D003452 ORTHO05D004046 9.1e-11 71.2 69 55.1
BcaB05g23189 Brassica carinata HOM05D003452 ORTHO05D004046 2.0e-10 70.1 172 29.7
Pp3c18_20990 Physcomitrium patens HOM05D003452 ORTHO05D004046 3.5e-10 69.3 226 23.9
Nitab4.5_0008152g0030 Nicotiana tabacum HOM05D003452 ORTHO05D004046 4.5e-10 68.9 112 37.5
CARHR112890 Cardamine hirsuta HOM05D003452 ORTHO05D004046 1.1e-08 64.3 73 46.6
HPP92_021466 Vanilla planifolia HOM05D005364 ORTHO05D006554 1.5e-08 63.9 95 38.9
AagrBONN_evm.TU.Sc2ySwM_344.2478 Anthoceros agrestis HOM05D005364 ORTHO05D006554 4.7e-07 58.9 88 42.0
Medtr1g029410 Medicago truncatula HOM05D005364 ORTHO05D006554 4.7e-07 58.9 97 40.2
PSO339G0322 Papaver somniferum HOM05D003452 ORTHO05D004046 8.0e-07 58.2 219 26.5
FAN27G1309 Fragaria x ananassa HOM05D005364 ORTHO05D006554 1.4e-06 57.4 96 38.5
Cre01.g036600 Chlamydomonas reinhardtii HOM05D003452 ORTHO05D004046 2.3e-06 56.6 94 39.4
FvH4_2g15020 Fragaria vesca HOM05D005364 ORTHO05D006554 2.3e-06 56.6 96 38.5
FAN15G1836 Fragaria x ananassa HOM05D005364 ORTHO05D006554 2.3e-06 56.6 96 38.5
FAN20G2210 Fragaria x ananassa HOM05D005364 ORTHO05D006554 2.3e-06 56.6 96 38.5
FAN24G1520 Fragaria x ananassa HOM05D005364 ORTHO05D006554 2.3e-06 56.6 96 38.5
PSO384G3646 Papaver somniferum HOM05D003452 ORTHO05D004046 2.3e-06 56.6 221 25.8
CSS0018960 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 5.2e-06 55.5 96 35.4
CSS0048679 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 5.2e-06 55.5 96 35.4


User provided reference genes

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