Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p032179 Quercus lobata HOM05D020009 ORTHO05D000004 1.7e-116 422.5 199 100.0
QL04p039404 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-63 246.5 237 55.3
QL02p000576 Quercus lobata HOM05D002132 ORTHO05D002168 1.5e-46 190.3 270 41.1
QL04p067637 Quercus lobata HOM05D000003 ORTHO05D000004 4.0e-44 182.2 182 50.0
QL10p043402 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-37 160.6 172 50.6
QL05p062712 Quercus lobata HOM05D000003 ORTHO05D000004 8.0e-37 157.9 232 38.8
QL06p011007 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-36 156.4 264 36.7
QL03p025076 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-35 153.7 248 37.1
QL12p025805 Quercus lobata HOM05D000967 ORTHO05D000796 2.8e-34 149.4 273 33.7
QL03p020372 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-33 147.1 180 43.3
QL09p031838 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-33 146.7 236 37.3
QL11p053175 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-32 144.1 209 38.3
QL01p005053 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-31 140.2 264 33.3
QL04p002075 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-31 139.0 158 44.9
QL05p065576 Quercus lobata HOM05D000003 ORTHO05D000004 5.5e-30 135.2 154 46.1
QL04p088136 Quercus lobata HOM05D000003 ORTHO05D000004 2.8e-29 132.9 235 34.9
QL02p041162 Quercus lobata HOM05D000003 ORTHO05D000004 3.6e-29 132.5 167 43.7
QL02p020718 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-28 129.8 142 45.8
QL12p042719 Quercus lobata HOM05D000003 ORTHO05D000004 3.0e-28 129.4 164 42.7
QL02p022361 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-27 126.7 264 31.8
QL05p036409 Quercus lobata HOM05D000003 ORTHO05D000004 5.7e-27 125.2 164 42.7
QL09p015564 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-27 124.8 162 41.4
QL05p052024 Quercus lobata HOM05D000003 ORTHO05D000004 9.8e-27 124.4 168 39.3
QL04p088840 Quercus lobata HOM05D000003 ORTHO05D000004 2.2e-26 123.2 225 33.3
QL09p031428 Quercus lobata HOM05D020009 ORTHO05D000004 2.2e-26 123.2 184 39.1
QL05p064920 Quercus lobata HOM05D000003 ORTHO05D000004 2.8e-26 122.9 147 43.5
QL03p006515 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-25 120.2 147 43.5
QL03p053290 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-24 117.5 134 44.8
QL06p031073 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-24 117.5 247 31.6
QL09p011339 Quercus lobata HOM05D000003 ORTHO05D000006 2.0e-24 116.7 154 41.6
QL10p062138 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-23 111.3 135 41.5
QL10p062985 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-23 111.3 135 41.5
QL02p052601 Quercus lobata HOM05D000003 ORTHO05D000004 3.6e-21 105.9 218 29.8
QL02p087577 Quercus lobata HOM05D000003 ORTHO05D000004 6.1e-21 105.1 104 49.0
QL05p026414 Quercus lobata HOM05D000103 ORTHO05D000049 6.1e-21 105.1 138 39.9
QL09p036209 Quercus lobata HOM05D020009 ORTHO05D000004 3.0e-20 102.8 148 40.5
QL05p014002 Quercus lobata HOM05D000003 ORTHO05D000004 6.8e-20 101.7 242 28.1
QL10p062870 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-19 100.1 209 30.6
QL03p017914 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-19 98.2 103 47.6
QL04p085495 Quercus lobata HOM05D020009 ORTHO05D000004 7.5e-19 98.2 74 54.1
QL05p002322 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-18 97.4 117 43.6
QL05p008698 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-17 92.8 102 45.1
QL09p000062 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-16 90.1 112 42.0
CiPaw.14G093100 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.9e-16 88.6 161 31.7
QL09p019629 Quercus lobata HOM05D000003 ORTHO05D000004 5.9e-16 88.6 120 38.3
QL02p088449 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-15 87.0 163 34.4
QL08p017448 Quercus lobata HOM05D000003 ORTHO05D000004 3.0e-15 86.3 173 31.2
QL12p030327 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-15 85.9 90 43.3
QL05p067574 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-15 84.7 143 39.2
QL09p033712 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-14 84.3 81 48.1
QL02p033692 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-14 84.0 85 45.9
QL05p019810 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-14 82.8 129 35.7
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.3e-14 82.4 175 29.1
QL11p050044 Quercus lobata HOM05D000003 ORTHO05D000004 7.3e-14 81.6 109 40.4
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.5e-14 81.3 149 30.2
QL07p020237 Quercus lobata HOM05D000003 ORTHO05D000004 9.5e-14 81.3 153 34.0
QL12p025216 Quercus lobata HOM05D000003 ORTHO05D000004 9.5e-14 81.3 133 35.3
QL93p0381_0054 Quercus lobata HOM05D000003 ORTHO05D000004 2.8e-13 79.7 211 27.5
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.6e-13 79.3 172 26.7
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 4.7e-13 79.0 164 30.5
QL03p063600 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-13 78.6 123 40.7
QL06p022312 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-13 78.6 76 46.1
QL11p049760 Quercus lobata HOM05D000003 ORTHO05D000004 8.0e-13 78.2 89 41.6
CiPaw.05G068400 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.3e-12 76.6 170 27.1
TAR250G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.3e-12 76.6 173 30.1
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.5e-11 73.9 167 27.5
QL10p061684 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-11 72.8 118 35.6
CANSAT01G1430 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-11 72.4 193 26.9
CiPaw.09G167800 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.8e-11 72.0 171 26.9
TAR164G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 5.8e-11 72.0 175 26.3
CiPaw.15G109000 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.8e-11 71.2 172 26.7
QL05p036384 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-10 70.9 144 31.9
CiPaw.10G106100 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.2e-10 70.1 174 23.0
QL10p018431 Quercus lobata HOM05D000003 ORTHO05D000004 3.7e-10 69.3 72 50.0
QL05p008349 Quercus lobata HOM05D000003 ORTHO05D000006 6.4e-10 68.6 143 27.3
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.3e-10 68.2 175 26.3
QL03p039168 Quercus lobata HOM05D000003 ORTHO05D000167 8.3e-10 68.2 142 31.0
CANSAT54G0106 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-09 67.0 228 24.6
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 1.9e-09 67.0 125 27.2
CANSAT80G0283 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-09 66.6 197 24.4
CiPaw.16G035600 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-09 66.6 89 36.0
QL04p017271 Quercus lobata HOM05D000021 ORTHO05D000010 2.4e-09 66.6 65 46.2
Ah.15g100100 Amaranthus hybridus HOM05D000003 ORTHO05D000004 5.4e-09 65.5 154 29.9
QL11p043810 Quercus lobata HOM05D020009 ORTHO05D000004 5.4e-09 65.5 171 29.8
QL02p032899 Quercus lobata HOM05D000003 ORTHO05D000004 7.0e-09 65.1 71 43.7
Ah.06g188390 Amaranthus hybridus HOM05D000003 ORTHO05D000004 9.2e-09 64.7 168 28.6
QL05p083592 Quercus lobata HOM05D000003 ORTHO05D000004 9.2e-09 64.7 67 43.3
QL05p083724 Quercus lobata HOM05D000003 ORTHO05D000004 9.2e-09 64.7 67 43.3
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.2e-08 64.3 274 21.2
QL05p039051 Quercus lobata HOM05D020009 ORTHO05D000004 1.2e-08 64.3 124 34.7
QL11p012750 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-08 64.3 155 28.4
QL12p015175 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-08 64.3 61 49.2
Aa31LG10G10270 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-08 63.5 210 25.7
CiPaw.06G023000 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.0e-08 63.5 148 28.4
QL04p016891 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-08 63.5 63 46.0
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.0e-08 63.5 164 27.4
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.0e-08 63.5 164 27.4
CiPaw.15G051200 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.7e-08 63.2 175 26.3
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.7e-08 63.2 207 25.6
QL06p019542 Quercus lobata HOM05D000003 ORTHO05D000004 3.5e-08 62.8 79 41.8
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.5e-08 62.8 164 27.4
Rhsim11G0140100 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.0e-08 62.0 207 27.1
QL04p002405 Quercus lobata HOM05D000038 ORTHO05D000143 7.8e-08 61.6 69 46.4
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.0e-07 61.2 162 30.9
CiPaw.11G073400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.0e-07 61.2 149 26.2
QL04p033651 Quercus lobata HOM05D000385 ORTHO05D000269 1.0e-07 61.2 77 40.3
QL12p028271 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-07 61.2 62 51.6
CANSAT80G2424 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-07 60.8 167 24.6
CiPaw.07G081000 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.3e-07 60.8 161 26.7
QL05p012339 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-07 60.8 72 38.9
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.3e-07 60.8 164 26.8
Atru.chr4.2116 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-07 60.5 164 24.4
BcaC04g20486 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-07 60.1 275 24.0
CANSAT25G0754 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-07 60.1 167 26.9
QL10p007205 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-07 60.1 51 54.9
CANSAT01G1428 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-07 59.7 235 24.3
QL04p082731 Quercus lobata HOM05D000038 ORTHO05D000143 3.0e-07 59.7 55 54.5
Atru.chr10.669 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-07 59.3 163 26.4
CANSAT80G0722 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-07 59.3 166 25.9
QL05p018687 Quercus lobata HOM05D000106 ORTHO05D000160 3.9e-07 59.3 177 24.3
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.9e-07 59.3 139 28.1
Aa31LG2G12260 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.0e-07 58.9 182 23.1
BolC7t42817H Brassica oleracea HOM05D000003 ORTHO05D000004 5.0e-07 58.9 275 20.4
QL05p002907 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-07 58.9 206 23.8
CANSAT54G1879 Cannabis sativa HOM05D000003 ORTHO05D000004 6.6e-07 58.5 165 24.2
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.6e-07 58.5 171 25.7
CANSAT01G1078 Cannabis sativa HOM05D000003 ORTHO05D000004 8.6e-07 58.2 164 25.6
PSO675G9045 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 58.2 177 24.9
QL04p009622 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-07 58.2 53 54.7
Atru.chr6.887 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 117 32.5
Atru.chr9.494 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-06 57.8 87 32.2
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 222 23.9
BraA04t16438Z Brassica rapa HOM05D000003 ORTHO05D001498 1.1e-06 57.8 134 28.4
QL03p005847 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 57.8 111 28.8
CANSAT78G2022 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-06 57.4 169 25.4
FvH4_6g12311 Fragaria vesca HOM05D000003 ORTHO05D000004 1.5e-06 57.4 212 25.0
PSO541G3861 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 57.4 197 27.9
Sed0000842 Sechium edule HOM05D000003 ORTHO05D000126 1.5e-06 57.4 179 23.5
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-06 57.0 173 28.9
CiPaw.05G213600 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.9e-06 57.0 83 37.3
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-06 57.0 235 24.7
Sed0012963 Sechium edule HOM05D000003 ORTHO05D000004 1.9e-06 57.0 150 24.0
CANSAT35G0748 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-06 56.6 209 23.0
CANSAT54G1043 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-06 56.6 181 23.8
Atru.chr12.386 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 56.2 158 25.3
BcaC07g38152 Brassica carinata HOM05D000003 ORTHO05D000004 3.3e-06 56.2 179 26.3
CANSAT64G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 56.2 133 27.8
Prupe.6G123900 Prunus persica HOM05D000003 ORTHO05D000004 3.3e-06 56.2 164 26.8
QL93p1911_0010 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 56.2 49 55.1
EL10Ac2g04745 Beta vulgaris HOM05D000003 ORTHO05D000006 4.3e-06 55.8 136 25.7
CANSAT21G2489 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-06 55.8 124 30.6
CANSAT35G1823 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-06 55.8 169 24.9
CANSAT64G0662 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-06 55.8 219 25.6
CANSAT78G1435 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-06 55.8 174 25.9
QL05p043982 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-06 55.8 152 28.3
QL05p078226 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-06 55.8 162 25.3
QL12p002221 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-06 55.8 58 43.1
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-06 55.5 161 27.3
CANSAT54G0625 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-06 55.5 157 23.6
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 5.6e-06 55.5 136 30.1
RcHm_v2.0_Chr4g0402201 Rosa chinensis HOM05D000003 ORTHO05D000004 5.6e-06 55.5 183 22.4
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.6e-06 55.5 169 24.9
BcaB07g32788 Brassica carinata HOM05D000003 ORTHO05D000004 7.3e-06 55.1 163 28.2
CANSAT64G2061 Cannabis sativa HOM05D000003 ORTHO05D000004 7.3e-06 55.1 162 24.1
Atru.chr3.1772 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 54.7 173 27.2
BcaC09g49394 Brassica carinata HOM05D000003 ORTHO05D000411 9.5e-06 54.7 211 26.1
CANSAT64G2253 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-06 54.7 171 29.8
AUR62008654 Chenopodium quinoa HOM05D000003 ORTHO05D000004 9.5e-06 54.7 163 23.9


User provided reference genes

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