Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 5.7e-55 217.6 133 100.0
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 2.0e-36 156.0 133 65.4
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 3.5e-36 155.2 102 78.4
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.0e-35 153.7 133 60.2
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 3.8e-35 151.8 133 59.4
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 6.5e-35 151.0 134 63.4
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.5e-34 149.8 132 72.0
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 3.2e-34 148.7 132 71.2
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 3.2e-34 148.7 100 74.0
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 3.2e-34 148.7 133 58.6
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 4.2e-34 148.3 130 72.3
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 5.5e-34 147.9 131 61.1
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 5.5e-34 147.9 132 64.4
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.6e-33 146.4 101 74.3
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 2.1e-33 146.0 104 74.0
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 1.0e-32 143.7 141 68.8
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 2.3e-32 142.5 104 76.0
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 1.5e-31 139.8 132 57.6
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 4.4e-31 138.3 135 63.7
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 4.4e-31 138.3 98 69.4
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 7.5e-31 137.5 128 59.4
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 9.7e-31 137.1 134 58.2
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 2.8e-30 135.6 128 57.0
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 4.8e-30 134.8 139 56.8
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 1.1e-29 133.7 133 54.9
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 1.8e-29 132.9 102 68.6
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 3.1e-29 132.1 95 69.5
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 3.1e-29 132.1 132 57.6
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 4.1e-29 131.7 131 55.0
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 7.0e-29 131.0 131 58.0
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 2.0e-28 129.4 140 60.7
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 3.5e-28 128.6 148 52.0
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 4.5e-28 128.3 131 57.3
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.5e-28 128.3 148 60.8
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 5.9e-28 127.9 127 57.5
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 7.7e-28 127.5 95 68.4
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 1.0e-27 127.1 160 51.2
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.3e-27 126.7 114 64.9
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.7e-27 126.3 136 55.1
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.7e-27 126.3 114 64.9
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.7e-27 126.3 86 69.8
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 1.7e-27 126.3 141 62.4
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 6.5e-27 124.4 109 66.1
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 2.5e-26 122.5 141 54.6
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.5e-26 122.5 132 53.0
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 1.2e-25 120.2 100 64.0
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 1.6e-25 119.8 131 54.2
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 2.1e-25 119.4 95 63.2
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 2.7e-25 119.0 98 63.3
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 3.6e-25 118.6 139 63.3
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 3.6e-25 118.6 154 49.4
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 8.0e-25 117.5 99 65.7
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.4e-24 116.7 102 62.7
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.4e-24 116.7 112 58.9
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 1.4e-24 116.7 112 58.9
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.4e-24 116.7 117 53.0
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.8e-24 116.3 112 58.0
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 2.3e-24 115.9 138 48.6
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 4.0e-24 115.2 144 48.6
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 2.0e-23 112.8 137 54.7
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 2.0e-23 112.8 89 64.0
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 1.3e-22 110.2 112 55.4
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 1.7e-22 109.8 140 47.9
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 8.3e-22 107.5 102 62.7
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.1e-21 107.1 102 60.8
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.4e-21 106.7 103 64.1
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 5.4e-21 104.8 100 59.0
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 7.0e-21 104.4 110 56.4
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 1.0e-19 100.5 110 56.4
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.1e-18 97.1 121 54.5
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 2.5e-18 95.9 103 58.3
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 3.3e-18 95.5 103 58.3
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 5.5e-18 94.7 102 56.9
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 9.5e-18 94.0 103 58.3
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 1.2e-17 93.6 102 56.9
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 3.6e-17 92.0 131 42.7
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 3.6e-17 92.0 103 58.3
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 6.1e-17 91.3 133 47.4
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 2.3e-16 89.4 103 55.3
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 2.3e-16 89.4 133 58.6
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 4.0e-16 88.6 120 50.8
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.3e-14 83.6 131 45.8
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 1.3e-14 83.6 131 45.8
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 2.2e-14 82.8 104 55.8
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.9e-14 81.6 96 51.0
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 8.3e-14 80.9 104 54.8
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 1.1e-13 80.5 99 53.5
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.6e-12 76.6 105 49.5
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 1.6e-12 76.6 105 49.5
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 7.8e-12 74.3 101 50.5
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 1.0e-11 73.9 134 49.3
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.7e-11 73.2 90 46.7
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 2.3e-11 72.8 101 46.5
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 1.5e-10 70.1 104 48.1
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 2.5e-10 69.3 123 39.8
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.3e-10 68.9 98 45.9
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.3e-10 68.6 117 44.4
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.6e-09 66.6 98 42.9
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 6.8e-08 61.2 79 46.8
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 1.5e-07 60.1 82 45.1
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 4.4e-07 58.5 101 38.6
Aqoxy6G03038 Aquilegia oxysepala HOM05D008614 ORTHO05D010420 7.5e-07 57.8 95 37.9
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 1.3e-06 57.0 97 37.1
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 1.3e-06 57.0 97 37.1
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 3.7e-06 55.5 133 33.1


User provided reference genes

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