Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p000543 Quercus lobata HOM05D000480 ORTHO05D000313 3.6e-129 464.9 237 100.0
QL04p000599 Quercus lobata HOM05D000480 ORTHO05D000313 1.4e-56 223.8 238 55.0
QL04p002118 Quercus lobata HOM05D000480 ORTHO05D000313 4.5e-47 192.2 242 49.6
QL04p002217 Quercus lobata HOM05D000480 ORTHO05D000313 6.4e-33 145.2 231 44.6
QL04p002304 Quercus lobata HOM05D000480 ORTHO05D000313 6.4e-33 145.2 282 38.3
QL04p002360 Quercus lobata HOM05D000480 ORTHO05D000313 8.6e-22 108.2 259 36.3
QL01p000908 Quercus lobata HOM05D000480 ORTHO05D000313 3.4e-18 96.3 170 40.6
QL01p001261 Quercus lobata HOM05D000480 ORTHO05D000313 7.6e-18 95.1 172 40.1
QL01p008880 Quercus lobata HOM05D000480 ORTHO05D000313 1.3e-17 94.4 222 36.9
QL01p009178 Quercus lobata HOM05D000480 ORTHO05D000313 1.3e-17 94.4 222 36.9
QL01p009195 Quercus lobata HOM05D000480 ORTHO05D000313 2.4e-16 90.1 233 34.8
QL09p051419 Quercus lobata HOM05D000480 ORTHO05D000313 9.3e-16 88.2 237 37.1
QL01p008896 Quercus lobata HOM05D000480 ORTHO05D000313 1.6e-15 87.4 217 38.7
Cfa012460 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.1e-15 87.0 108 48.1
QL01p008905 Quercus lobata HOM05D000480 ORTHO05D000313 3.5e-15 86.3 186 39.8
QL01p009318 Quercus lobata HOM05D000480 ORTHO05D000313 8.7e-14 81.6 236 33.5
QL06p034440 Quercus lobata HOM05D000480 ORTHO05D000313 8.7e-14 81.6 239 33.5
QL09p051354 Quercus lobata HOM05D000480 ORTHO05D000313 8.7e-14 81.6 239 34.3
QL09p051310 Quercus lobata HOM05D000480 ORTHO05D000313 1.5e-13 80.9 237 34.2
QL01p008910 Quercus lobata HOM05D000480 ORTHO05D000313 1.9e-13 80.5 213 38.5
Cfa021235 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.3e-12 77.8 98 49.0
QL09p051476 Quercus lobata HOM05D000480 ORTHO05D000313 1.3e-12 77.8 217 35.0
QL01p008575 Quercus lobata HOM05D000480 ORTHO05D000313 2.1e-12 77.0 106 42.5
QL01p009420 Quercus lobata HOM05D000480 ORTHO05D000313 2.1e-12 77.0 246 32.1
QL01p009236 Quercus lobata HOM05D000480 ORTHO05D000313 4.8e-12 75.9 266 30.8
QL01p009608 Quercus lobata HOM05D000480 ORTHO05D000313 4.8e-12 75.9 234 32.5
QL01p008822 Quercus lobata HOM05D000480 ORTHO05D000313 1.4e-11 74.3 217 33.2
QL10p001466 Quercus lobata HOM05D000480 ORTHO05D000313 2.4e-11 73.6 245 32.2
QL08p043484 Quercus lobata HOM05D000480 ORTHO05D000313 9.0e-11 71.6 195 33.8
Duzib114G0288 Durio zibethinus HOM05D000480 ORTHO05D000313 7.6e-10 68.6 95 40.0
QL01p008862 Quercus lobata HOM05D000480 ORTHO05D000313 9.9e-10 68.2 192 31.8
QL08p043468 Quercus lobata HOM05D000480 ORTHO05D000313 1.7e-09 67.4 251 30.7
Thecc.10G055800 Theobroma cacao HOM05D000480 ORTHO05D000313 1.7e-09 67.4 224 33.5
CARHR255620 Cardamine hirsuta HOM05D000480 ORTHO05D000313 2.9e-09 66.6 112 34.8
Cfa004479 Carpinus fangiana HOM05D000480 ORTHO05D000313 3.8e-09 66.2 229 33.6
Cfa012310 Carpinus fangiana HOM05D000480 ORTHO05D000313 6.4e-09 65.5 224 31.2
Eucgr.L00123 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.4e-08 64.3 181 28.7
Gohir.A05G299900 Gossypium hirsutum HOM05D000480 ORTHO05D000313 1.9e-08 63.9 234 31.2
QL10p001535 Quercus lobata HOM05D000480 ORTHO05D000313 3.2e-08 63.2 216 31.5
arahy.Tifrunner.gnm1.ann1.80FDQG Arachis hypogaea HOM05D000480 ORTHO05D000313 5.4e-08 62.4 122 36.1
COL.COLO4_14903 Corchorus olitorius HOM05D000480 ORTHO05D000313 5.4e-08 62.4 101 39.6
CiPaw.11G073300 Carya illinoinensis HOM05D000480 ORTHO05D000313 7.1e-08 62.0 245 29.8
Gorai.009G317100 Gossypium raimondii HOM05D000480 ORTHO05D000313 9.3e-08 61.6 232 30.6
BcaB01g01575 Brassica carinata HOM05D000480 ORTHO05D000313 1.2e-07 61.2 108 37.0
Thecc.04G134700 Theobroma cacao HOM05D000480 ORTHO05D000313 1.6e-07 60.8 104 34.6
CSS0039192 Camellia sinensis var. sinensis HOM05D000480 ORTHO05D000313 2.1e-07 60.5 228 33.3
Gohir.A05G299800 Gossypium hirsutum HOM05D000480 ORTHO05D000313 2.1e-07 60.5 233 31.3
Nitab4.5_0003567g0080 Nicotiana tabacum HOM05D000480 ORTHO05D000313 2.1e-07 60.5 221 29.4
QL01p007528 Quercus lobata HOM05D000480 ORTHO05D000313 2.1e-07 60.5 225 28.4
Cfa012316 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.7e-07 60.1 139 33.1
BraA09t36340Z Brassica rapa HOM05D000480 ORTHO05D000313 3.5e-07 59.7 109 33.9
CARHR223630 Cardamine hirsuta HOM05D000480 ORTHO05D000313 3.5e-07 59.7 122 35.2
Cfa010311 Carpinus fangiana HOM05D000480 ORTHO05D000313 3.5e-07 59.7 103 31.1
THA.LOC104820697 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 3.5e-07 59.7 140 30.0
CiPaw.11G073200 Carya illinoinensis HOM05D000480 ORTHO05D000313 4.6e-07 59.3 230 30.0
Cfa010029 Carpinus fangiana HOM05D000480 ORTHO05D000313 6.0e-07 58.9 227 29.5
Thhalv10028610m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 7.9e-07 58.5 109 38.5
Aa31LG2G13160 Aethionema arabicum HOM05D000480 ORTHO05D000313 1.0e-06 58.2 125 33.6
Cc00_g32620 Coffea canephora HOM05D000480 ORTHO05D000313 1.0e-06 58.2 223 29.1
Eucgr.H05145 Eucalyptus grandis HOM05D000480 ORTHO05D000313 1.0e-06 58.2 116 38.8
Gohir.D05G299600 Gossypium hirsutum HOM05D000480 ORTHO05D000313 1.0e-06 58.2 232 30.6
Aa31LG9G11340 Aethionema arabicum HOM05D000480 ORTHO05D000313 1.3e-06 57.8 102 35.3
Gohir.A03G003850 Gossypium hirsutum HOM05D000480 ORTHO05D000313 1.3e-06 57.8 193 32.6
Glyma.06G237900 Glycine max HOM05D000480 ORTHO05D000313 1.7e-06 57.4 246 27.2
PGR031G3290 Punica granatum HOM05D000480 ORTHO05D000313 1.7e-06 57.4 68 41.2
Thecc.01G132200 Theobroma cacao HOM05D000480 ORTHO05D000313 1.7e-06 57.4 98 35.7
Cfa012319 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.3e-06 57.0 234 26.5
Thhalv10029125m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 2.3e-06 57.0 122 32.8
arahy.Tifrunner.gnm1.ann1.GU1UEY Arachis hypogaea HOM05D000480 ORTHO05D000313 3.0e-06 56.6 64 40.6
Cfa021225 Carpinus fangiana HOM05D000480 ORTHO05D000313 3.0e-06 56.6 208 31.2
Duzib106G1079 Durio zibethinus HOM05D000480 ORTHO05D000313 3.9e-06 56.2 99 36.4
Thecc.10G056300 Theobroma cacao HOM05D000480 ORTHO05D000313 3.9e-06 56.2 91 37.4
Duzib106G1550 Durio zibethinus HOM05D000480 ORTHO05D000313 5.1e-06 55.8 121 30.6
Duzib114G0019 Durio zibethinus HOM05D000480 ORTHO05D000313 5.1e-06 55.8 103 36.9
Gohir.D03G168550 Gossypium hirsutum HOM05D000480 ORTHO05D000313 5.1e-06 55.8 126 34.9
Phvul.009G085000 Phaseolus vulgaris HOM05D000480 ORTHO05D000313 5.1e-06 55.8 240 28.3
PGR004G0350 Punica granatum HOM05D000480 ORTHO05D000313 5.1e-06 55.8 48 54.2
PGR146G0003 Punica granatum HOM05D000480 ORTHO05D000313 5.1e-06 55.8 48 54.2
THA.LOC104799245 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 5.1e-06 55.8 116 31.0
Thecc.10G054300 Theobroma cacao HOM05D000480 ORTHO05D000313 5.1e-06 55.8 103 36.9
Thecc.10G054900 Theobroma cacao HOM05D000480 ORTHO05D000313 6.6e-06 55.5 107 35.5
TAR374G1225 Trochodendron aralioides HOM05D000480 ORTHO05D000313 6.6e-06 55.5 220 32.3
BcaC04g21204 Brassica carinata HOM05D000480 ORTHO05D000313 8.7e-06 55.1 107 36.4
C09p34350 Brassica napus HOM05D000480 ORTHO05D000313 8.7e-06 55.1 107 36.4
BolC9t56278H Brassica oleracea HOM05D000480 ORTHO05D000313 8.7e-06 55.1 107 36.4
PGR031G3286 Punica granatum HOM05D000480 ORTHO05D000313 8.7e-06 55.1 122 31.1
Thecc.10G053900 Theobroma cacao HOM05D000480 ORTHO05D034848 8.7e-06 55.1 103 35.9


User provided reference genes

Program Settings