Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p072672 Quercus lobata HOM05D005568 ORTHO05D006940 1.1e-56 223.0 108 100.0
QL12p030796 Quercus lobata HOM05D005568 ORTHO05D006940 2.6e-50 201.8 108 89.8
Haze_11911 Corylus avellana HOM05D005568 ORTHO05D006940 5.1e-46 187.6 108 81.5
CiPaw.05G125400 Carya illinoinensis HOM05D005568 ORTHO05D006940 6.2e-44 180.6 108 78.7
GSVIVG01012218001 Vitis vinifera HOM05D005568 ORTHO05D006940 1.3e-38 162.9 107 72.0
Duzib248G1642 Durio zibethinus HOM05D005568 ORTHO05D006940 1.5e-37 159.5 108 68.5
MD16G1061400 Malus domestica HOM05D005568 ORTHO05D006940 2.5e-37 158.7 107 67.3
RcHm_v2.0_Chr4g0438391 Rosa chinensis HOM05D005568 ORTHO05D006940 3.3e-37 158.3 107 67.3
TAR622G0890 Trochodendron aralioides HOM05D005568 ORTHO05D006940 2.8e-36 155.2 108 66.7
FAN22G1579 Fragaria x ananassa HOM05D005568 ORTHO05D006940 3.7e-36 154.8 107 66.4
Prupe.1G286700 Prunus persica HOM05D005568 ORTHO05D006940 1.4e-35 152.9 107 66.4
Ciclev10031554m.g Citrus clementina HOM05D005568 ORTHO05D006940 3.1e-35 151.8 108 65.7
FvH4_4g30090 Fragaria vesca HOM05D005568 ORTHO05D006940 5.3e-35 151.0 107 64.5
FAN07G0232 Fragaria x ananassa HOM05D005568 ORTHO05D006940 5.3e-35 151.0 107 64.5
FAN12G3709 Fragaria x ananassa HOM05D005568 ORTHO05D006940 5.3e-35 151.0 107 64.5
FAN17G2544 Fragaria x ananassa HOM05D005568 ORTHO05D006940 6.9e-35 150.6 107 64.5
Atru.chr11.1627 Acer truncatum HOM05D005568 ORTHO05D006940 2.6e-34 148.7 108 62.0
Manes.01G027700 Manihot esculenta HOM05D005568 ORTHO05D006940 2.6e-34 148.7 107 65.4
Hma1.2p1_0566F.1_g179750 Hydrangea macrophylla HOM05D005568 ORTHO05D006940 4.5e-34 147.9 106 64.2
Thecc.02G330600 Theobroma cacao HOM05D005568 ORTHO05D006940 7.6e-34 147.1 107 64.5
CSS0039095 Camellia sinensis var. sinensis HOM05D005568 ORTHO05D006940 8.5e-33 143.7 106 63.2
Lj6A779T68 Lonicera japonica HOM05D005568 ORTHO05D006940 5.5e-32 141.0 105 61.9
Cpa.g.sc1.123 Carica papaya HOM05D005568 ORTHO05D006940 7.2e-32 140.6 108 62.0
Potri.008G095700 Populus trichocarpa HOM05D005568 ORTHO05D006940 7.2e-32 140.6 107 64.5
Actinidia16167 Actinidia chinensis HOM05D005568 ORTHO05D006940 9.3e-32 140.2 108 60.2
Peaxi162Scf00175g00125 Petunia axillaris HOM05D005568 ORTHO05D006940 9.3e-32 140.2 108 63.9
CANSAT64G0560 Cannabis sativa HOM05D005568 ORTHO05D006940 1.2e-31 139.8 107 60.7
Solyc05g012290.3 Solanum lycopersicum HOM05D005568 ORTHO05D006940 1.6e-31 139.4 108 61.1
Ah.12g059120 Amaranthus hybridus HOM05D005568 ORTHO05D006940 2.1e-31 139.0 108 58.3
Cc11_g11980 Coffea canephora HOM05D005568 ORTHO05D006940 3.6e-31 138.3 107 56.1
Aqoxy3G03640 Aquilegia oxysepala HOM05D005568 ORTHO05D006940 7.9e-31 137.1 106 58.5
Sabra08G0072100 Salix brachista HOM05D005568 ORTHO05D006940 1.0e-30 136.7 108 63.0
Sopen05g007120 Solanum pennellii HOM05D005568 ORTHO05D006940 1.0e-30 136.7 108 60.2
Medtr5g044720 Medicago truncatula HOM05D005568 ORTHO05D006940 1.4e-30 136.3 105 63.8
DCAR_030041 Daucus carota HOM05D005568 ORTHO05D006940 1.8e-30 136.0 107 59.8
Nitab4.5_0000231g0340 Nicotiana tabacum HOM05D005568 ORTHO05D006940 1.8e-30 136.0 108 58.3
EL10Ac5g12478 Beta vulgaris HOM05D005568 ORTHO05D006940 3.0e-30 135.2 107 57.9
Nitab4.5_0001487g0140 Nicotiana tabacum HOM05D005568 ORTHO05D006940 6.7e-30 134.0 108 58.3
PGSC0003DMG400028318 Solanum tuberosum HOM05D005568 ORTHO05D006940 6.7e-30 134.0 109 59.6
ECA233G1797 Erigeron canadensis HOM05D005568 ORTHO05D006940 8.8e-30 133.7 108 58.3
Hund10887 Selenicereus undatus HOM05D005568 ORTHO05D006940 1.1e-29 133.3 107 55.1
TPR.G24479 Trifolium pratense HOM05D005568 ORTHO05D006940 1.1e-29 133.3 105 61.0
Rhsim09G0127600 Rhododendron simsii HOM05D005568 ORTHO05D006940 1.5e-29 132.9 99 59.6
HanXRQChr08g0211781 Helianthus annuus HOM05D005568 ORTHO05D006940 1.9e-29 132.5 108 58.3
AUR62030755 Chenopodium quinoa HOM05D005568 ORTHO05D006940 3.3e-29 131.7 115 58.3
MBI16_g24180_MAGBIO Magnolia biondii HOM05D005568 ORTHO05D006940 4.3e-29 131.3 101 60.4
Migut.L01192 Erythranthe guttata HOM05D005568 ORTHO05D006940 7.4e-29 130.6 108 54.6
THA.LOC104824056 Tarenaya hassleriana HOM05D005568 ORTHO05D006940 1.7e-28 129.4 108 57.4
Lj2g0017860 Lotus japonicus HOM05D005568 ORTHO05D006940 2.2e-28 129.0 105 61.0
Lalb_Chr10g0098831 Lupinus albus HOM05D005568 ORTHO05D006940 2.8e-28 128.6 108 61.1
CAN.G616.43 Capsicum annuum HOM05D005568 ORTHO05D006940 3.7e-28 128.3 99 59.6
Gohir.A12G161300 Gossypium hirsutum HOM05D005568 ORTHO05D006940 3.7e-28 128.3 98 61.2
Gohir.D12G164600 Gossypium hirsutum HOM05D005568 ORTHO05D006940 3.7e-28 128.3 98 60.2
Gorai.008G177200 Gossypium raimondii HOM05D005568 ORTHO05D006940 3.7e-28 128.3 98 60.2
A06p09820 Brassica napus HOM05D005568 ORTHO05D006940 8.2e-28 127.1 109 56.9
Carub.0001s1349 Capsella rubella HOM05D005568 ORTHO05D006940 1.1e-27 126.7 109 56.9
CARHR014160 Cardamine hirsuta HOM05D005568 ORTHO05D006940 1.4e-27 126.3 109 56.0
Sed0026263 Sechium edule HOM05D005568 ORTHO05D006940 1.4e-27 126.3 107 52.3
TWI31G1152 Tripterygium wilfordii HOM05D005568 ORTHO05D006940 1.4e-27 126.3 99 60.6
vmacro10423 Vaccinium macrocarpon HOM05D005568 ORTHO05D006940 1.4e-27 126.3 103 58.3
VMungo1215G2929 Vigna mungo HOM05D005568 ORTHO05D006940 1.4e-27 126.3 105 59.0
AL1G25570 Arabidopsis lyrata HOM05D005568 ORTHO05D006940 1.8e-27 125.9 109 56.0
Sp1g12160 Schrenkiella parvula HOM05D005568 ORTHO05D006940 1.8e-27 125.9 109 56.0
Glyma.02G116567 Glycine max HOM05D005568 ORTHO05D006940 6.9e-27 124.0 105 60.0
Phvul.003G042500 Phaseolus vulgaris HOM05D005568 ORTHO05D006940 6.9e-27 124.0 105 58.1
Glyma.01G059200 Glycine max HOM05D005568 ORTHO05D006940 9.1e-27 123.6 102 60.8
SalBow2G0760 Salvia bowleyana HOM05D005568 ORTHO05D006940 9.1e-27 123.6 98 55.1
BraA06t24172Z Brassica rapa HOM05D005568 ORTHO05D006940 1.5e-26 122.9 109 55.0
BcaC05g25284 Brassica carinata HOM05D005568 ORTHO05D006940 7.7e-26 120.6 109 53.2
Thhalv10007655m.g Eutrema salsugineum HOM05D005568 ORTHO05D006940 7.7e-26 120.6 109 52.3
COL.COLO4_27886 Corchorus olitorius HOM05D005568 ORTHO05D006940 1.0e-25 120.2 93 59.1
Lsat_1_v5_gn_8_46541 Lactuca sativa HOM05D005568 ORTHO05D006940 1.0e-25 120.2 97 59.8
ClCG08G010410 Citrullus lanatus HOM05D005568 ORTHO05D006940 1.3e-25 119.8 107 54.2
arahy.Tifrunner.gnm1.ann1.MYF1K6 Arachis hypogaea HOM05D005568 ORTHO05D006940 1.7e-25 119.4 105 55.2
arahy.Tifrunner.gnm1.ann1.TQ64T1 Arachis hypogaea HOM05D005568 ORTHO05D006940 1.7e-25 119.4 105 55.2
C05p11620 Brassica napus HOM05D005568 ORTHO05D006940 1.7e-25 119.4 109 53.2
BolC5t29908H Brassica oleracea HOM05D005568 ORTHO05D006940 1.7e-25 119.4 109 53.2
SGA_v2.0_scaffold36G14456 Striga asiatica HOM05D005568 ORTHO05D006940 2.9e-25 118.6 108 53.7
BcaB02g06475 Brassica carinata HOM05D005568 ORTHO05D006940 3.8e-25 118.2 100 56.0
AT1G13770 Arabidopsis thaliana HOM05D005568 ORTHO05D006940 6.5e-25 117.5 109 53.2
AUR62036400 Chenopodium quinoa HOM05D005568 ORTHO05D006940 1.4e-24 116.3 102 56.9
HPP92_024922 Vanilla planifolia HOM05D005568 ORTHO05D006940 1.4e-24 116.3 108 46.3
PSO478G2131 Papaver somniferum HOM05D005568 ORTHO05D006940 2.5e-24 115.5 99 51.5
arahy.Tifrunner.gnm1.ann1.H69QIP Arachis hypogaea HOM05D005568 ORTHO05D006940 4.2e-24 114.8 105 50.5
PSO017G2580 Papaver somniferum HOM05D005568 ORTHO05D006940 5.5e-24 114.4 99 50.5
Zm00001eb400240 Zea mays HOM05D005568 ORTHO05D006940 1.6e-23 112.8 107 46.7
MELO3C011420.2 Cucumis melo HOM05D005568 ORTHO05D006940 2.7e-23 112.1 99 55.6
CsaV3_6G033680 Cucumis sativus L. HOM05D005568 ORTHO05D006940 8.8e-22 107.1 99 53.5
Aa31LG1G1170 Aethionema arabicum HOM05D005568 ORTHO05D006940 1.1e-21 106.7 106 47.2
Nn3g17444 Nelumbo nucifera HOM05D005568 ORTHO05D006940 5.7e-21 104.4 107 48.6
unitig_22.g6492 Utricularia gibba HOM05D005568 ORTHO05D006940 9.7e-21 103.6 110 43.6
ATR0907G009 Amborella trichopoda HOM05D005568 ORTHO05D006940 4.8e-20 101.3 99 44.4
GSVIVG01031111001 Vitis vinifera HOM05D005568 ORTHO05D006940 2.4e-19 99.0 66 72.7
Oeu004582.1 Olea europaea HOM05D005568 ORTHO05D006940 5.3e-19 97.8 74 59.5
Atru.BG.280.p Acer truncatum HOM05D005568 ORTHO05D006940 8.5e-17 90.5 63 65.1
SEGI_02746 Sequoiadendron giganteum HOM05D005568 ORTHO05D006940 6.7e-14 80.9 96 43.8
PGR102G3278 Punica granatum HOM05D005568 ORTHO05D006940 1.1e-13 80.1 77 48.1
CBR_g29960 Chara braunii HOM05D005568 ORTHO05D006940 9.1e-11 70.5 101 34.7
Nitab4.5_0007976g0020 Nicotiana tabacum HOM05D005568 ORTHO05D006940 1.2e-10 70.1 65 50.8
Pp3c17_20490 Physcomitrium patens HOM05D005568 ORTHO05D006940 1.2e-10 70.1 93 37.6
Hma1.2p1_0354F.1_g133380 Hydrangea macrophylla HOM05D005568 ORTHO05D006940 1.6e-10 69.7 80 46.2
GSVIVG01031104001 Vitis vinifera HOM05D005568 ORTHO05D006940 1.0e-06 57.0 66 50.0


User provided reference genes

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