Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 2.0e-90 335.9 190 100.0
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.6e-58 229.9 192 63.0
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 1.1e-56 223.8 192 62.0
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.5e-56 223.4 188 62.8
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 2.4e-54 216.1 129 76.7
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 9.9e-53 210.7 201 56.7
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 2.2e-52 209.5 124 78.2
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 2.2e-52 209.5 122 79.5
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 3.8e-52 208.8 125 76.0
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 3.8e-52 208.8 125 76.0
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 3.8e-52 208.8 125 76.0
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 4.9e-52 208.4 115 81.7
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.4e-51 206.8 129 74.4
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.9e-51 206.5 131 74.0
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 2.4e-51 206.1 123 77.2
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 3.2e-51 205.7 125 76.0
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 4.2e-51 205.3 123 75.6
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 5.4e-51 204.9 122 76.2
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 9.3e-51 204.1 122 77.9
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.6e-50 203.4 122 77.9
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 1.6e-50 203.4 116 78.4
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 1.6e-50 203.4 124 72.6
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 2.1e-50 203.0 116 78.4
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.7e-50 202.6 121 75.2
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 4.6e-50 201.8 120 75.8
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 1.3e-49 200.3 116 76.7
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 1.3e-49 200.3 124 74.2
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.7e-49 199.9 119 75.6
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.7e-49 199.9 122 76.2
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.7e-49 199.9 120 77.5
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 1.7e-49 199.9 120 75.8
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.0e-49 199.1 122 76.2
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 8.7e-49 197.6 125 72.0
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 1.9e-48 196.4 120 71.7
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.9e-48 196.4 122 74.6
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 4.3e-48 195.3 112 77.7
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 4.3e-48 195.3 121 73.6
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 4.3e-48 195.3 133 69.9
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 7.3e-48 194.5 123 71.5
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 9.6e-48 194.1 110 78.2
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 1.6e-47 193.4 121 71.1
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 2.1e-47 193.0 129 71.3
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 2.1e-47 193.0 125 71.2
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 2.8e-47 192.6 122 72.1
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 2.8e-47 192.6 113 77.9
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 2.8e-47 192.6 114 75.4
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 2.8e-47 192.6 114 75.4
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 3.6e-47 192.2 127 71.7
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.6e-47 192.2 114 74.6
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 6.2e-47 191.4 120 71.7
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 6.2e-47 191.4 130 70.0
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 8.1e-47 191.0 125 70.4
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 1.1e-46 190.7 122 71.3
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 1.8e-46 189.9 125 68.8
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.4e-46 189.5 186 52.7
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 2.4e-46 189.5 121 70.2
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.1e-46 189.1 121 71.9
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 5.3e-46 188.3 126 69.8
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 6.9e-46 188.0 121 71.1
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 9.0e-46 187.6 115 76.5
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 9.0e-46 187.6 122 70.5
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 1.2e-45 187.2 128 66.4
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 1.2e-45 187.2 128 66.4
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 1.2e-45 187.2 128 66.4
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 1.2e-45 187.2 124 70.2
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 3.4e-45 185.7 113 69.9
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 4.5e-45 185.3 113 69.9
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 4.5e-45 185.3 113 69.9
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 5.8e-45 184.9 113 73.5
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 5.8e-45 184.9 115 73.0
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 5.8e-45 184.9 115 73.9
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 7.6e-45 184.5 111 73.0
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.3e-44 183.7 122 68.9
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 1.3e-44 183.7 123 68.3
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 1.7e-44 183.3 123 66.7
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 2.2e-44 183.0 123 67.5
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 2.2e-44 183.0 123 66.7
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 2.2e-44 183.0 120 66.7
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 2.9e-44 182.6 114 71.9
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 2.9e-44 182.6 114 74.6
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 4.9e-44 181.8 123 67.5
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 8.4e-44 181.0 126 65.9
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 1.9e-43 179.9 114 72.8
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 3.2e-43 179.1 131 64.1
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 4.2e-43 178.7 111 73.0
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 5.5e-43 178.3 119 68.1
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.2e-42 177.2 114 71.1
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.6e-42 176.8 127 63.8
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 1.8e-41 173.3 127 63.8
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 3.9e-41 172.2 109 68.8
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 6.7e-41 171.4 111 68.5
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 2.5e-40 169.5 119 67.2
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 9.6e-40 167.5 114 65.8
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 4.0e-38 162.2 126 61.1
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 6.9e-38 161.4 126 61.1
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 3.4e-37 159.1 141 57.4
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 5.8e-37 158.3 95 72.6
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.4e-35 153.7 103 65.0
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 4.3e-32 142.1 108 58.3
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 3.7e-31 139.0 108 57.4
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.5e-29 133.7 125 51.2
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 3.4e-29 132.5 120 51.7
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.7e-28 130.2 104 55.8
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 2.2e-28 129.8 105 57.1
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 5.0e-28 128.6 109 51.4
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 6.5e-28 128.3 102 54.9
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 8.4e-28 127.9 106 52.8
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 1.1e-27 127.5 105 56.2
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 1.1e-27 127.5 105 55.2
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.4e-27 127.1 124 50.8
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.9e-27 126.7 105 51.4
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.9e-27 126.7 106 52.8
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.9e-27 126.7 102 56.9
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 2.5e-27 126.3 130 48.5
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 2.5e-27 126.3 110 54.5
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 4.2e-27 125.6 126 48.4
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 5.5e-27 125.2 106 51.9
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 7.2e-27 124.8 105 53.3
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 7.2e-27 124.8 62 85.5
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 9.3e-27 124.4 105 51.4
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 9.3e-27 124.4 105 55.2
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 9.3e-27 124.4 105 51.4
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.2e-26 124.0 105 54.3
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 1.2e-26 124.0 125 48.0
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.1e-26 123.2 110 49.1
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 2.1e-26 123.2 106 50.9
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 2.7e-26 122.9 110 48.2
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 3.5e-26 122.5 104 52.9
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.0e-25 120.9 125 44.8
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.0e-25 120.9 103 50.5
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.0e-25 120.9 105 49.5
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.0e-25 120.9 105 51.4
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 1.3e-25 120.6 105 50.5
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-25 120.2 110 48.2
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.8e-25 120.2 105 48.6
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 2.3e-25 119.8 105 48.6
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.3e-25 119.8 105 48.6
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.3e-25 119.8 64 81.2
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 3.0e-25 119.4 98 57.1
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.1e-25 118.6 110 47.3
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 6.7e-25 118.2 102 51.0
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 8.7e-25 117.9 102 51.0
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 8.7e-25 117.9 102 50.0
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 8.7e-25 117.9 132 43.9
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.9e-24 116.7 123 45.5
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 2.5e-24 116.3 155 41.3
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.2e-23 113.2 105 45.7
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 2.2e-23 113.2 116 45.7
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 3.7e-23 112.5 104 48.1
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 4.8e-23 112.1 113 47.8
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.8e-23 112.1 105 46.7
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 4.8e-23 112.1 151 39.7
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 8.2e-23 111.3 106 45.3
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.1e-22 110.9 121 45.5
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 2.4e-22 109.8 58 79.3
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 3.1e-22 109.4 107 45.8
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.6e-21 106.3 94 51.1
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 2.9e-20 102.8 63 71.4
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.9e-19 100.1 132 40.2
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.9e-19 100.1 132 40.2
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 5.5e-19 98.6 102 47.1
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 4.6e-18 95.5 98 52.0
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 6.7e-17 91.7 107 42.1
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 2.5e-16 89.7 91 46.2
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 3.7e-15 85.9 123 39.8
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 3.7e-15 85.9 189 27.5
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 2.0e-13 80.1 59 55.9
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 3.4e-13 79.3 63 52.4
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 3.8e-12 75.9 59 62.7
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.1e-08 64.3 75 42.7
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 8.2e-07 58.2 71 42.3
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 4.1e-06 55.8 39 64.1
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 9.1e-06 54.7 47 53.2


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