Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p028135 Quercus lobata HOM05D015411 ORTHO05D043376 3.8e-129 464.9 250 100.0
QL02p075438 Quercus lobata HOM05D000264 ORTHO05D000152 1.2e-18 97.8 237 35.4
QL03p028282 Quercus lobata HOM05D000264 ORTHO05D000152 1.4e-14 84.3 209 32.1
QL02p020235 Quercus lobata HOM05D000264 ORTHO05D000152 2.9e-12 76.6 189 34.4
QL03p028195 Quercus lobata HOM05D015411 ORTHO05D000152 3.2e-11 73.2 205 31.2
QL07p032650 Quercus lobata HOM05D015411 ORTHO05D000152 3.2e-11 73.2 205 31.2
CANSAT11G2504 Cannabis sativa HOM05D015411 ORTHO05D043376 1.6e-10 70.9 196 31.6
QL03p016551 Quercus lobata HOM05D000264 ORTHO05D000152 4.7e-10 69.3 112 44.6
CANSAT54G1172 Cannabis sativa HOM05D000264 ORTHO05D000152 6.1e-10 68.9 186 30.1
GSVIVG01001631001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.0e-09 66.6 106 42.5
ClCG02G016850 Citrullus lanatus HOM05D000264 ORTHO05D000152 6.8e-09 65.5 202 28.2
GSVIVG01027206001 Vitis vinifera HOM05D000264 ORTHO05D000152 6.8e-09 65.5 142 34.5
FvH4_1g18590 Fragaria vesca HOM05D000264 ORTHO05D000152 8.8e-09 65.1 161 29.2
FAN19G0588 Fragaria x ananassa HOM05D000264 ORTHO05D000152 1.2e-08 64.7 159 29.6
GSVIVG01010731001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.2e-08 64.7 153 31.4
CSS0036307 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 2.6e-08 63.5 135 37.0
Cc11_g07200 Coffea canephora HOM05D000264 ORTHO05D000152 2.6e-08 63.5 112 41.1
GSVIVG01036241001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.6e-08 63.5 173 34.1
MD04G1020900 Malus domestica HOM05D000264 ORTHO05D000152 3.4e-08 63.2 149 30.9
CANSAT11G0583 Cannabis sativa HOM05D000264 ORTHO05D000152 4.4e-08 62.8 140 33.6
MELO3C004399.2 Cucumis melo HOM05D000264 ORTHO05D000152 4.4e-08 62.8 113 34.5
ClCG02G016840 Citrullus lanatus HOM05D000264 ORTHO05D000152 5.7e-08 62.4 136 33.8
Sed0022421 Sechium edule HOM05D000264 ORTHO05D000152 5.7e-08 62.4 119 33.6
GSVIVG01001636001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.7e-08 62.4 166 33.1
GSVIVG01036248001 Vitis vinifera HOM05D000264 ORTHO05D000152 7.5e-08 62.0 174 32.8
CSS0044576 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 9.8e-08 61.6 139 34.5
CsaV3_2G003930 Cucumis sativus L. HOM05D000264 ORTHO05D000152 1.7e-07 60.8 182 25.8
MD02G1193600 Malus domestica HOM05D000264 ORTHO05D000152 1.7e-07 60.8 70 42.9
GSVIVG01036249001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.8e-07 60.1 136 33.8
MD10G1197300 Malus domestica HOM05D000264 ORTHO05D000152 3.7e-07 59.7 153 30.7
Thecc.05G278100 Theobroma cacao HOM05D000264 ORTHO05D000152 3.7e-07 59.7 181 29.3
COL.COLO4_15399 Corchorus olitorius HOM05D000264 ORTHO05D000152 4.9e-07 59.3 124 33.1
Thhalv10020630m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 6.3e-07 58.9 143 32.2
FAN26G1698 Fragaria x ananassa HOM05D000264 ORTHO05D000152 6.3e-07 58.9 145 34.5
GSVIVG01036250001 Vitis vinifera HOM05D000264 ORTHO05D000152 6.3e-07 58.9 140 32.9
DCAR_029612 Daucus carota HOM05D000264 ORTHO05D000152 8.3e-07 58.5 150 30.7
FAN21G2481 Fragaria x ananassa HOM05D000264 ORTHO05D000152 8.3e-07 58.5 167 29.9
Lj3A662G12 Lonicera japonica HOM05D000264 ORTHO05D000152 8.3e-07 58.5 141 31.2
GSVIVG01001627001 Vitis vinifera HOM05D000264 ORTHO05D000152 8.3e-07 58.5 136 34.6
C03p40960 Brassica napus HOM05D000264 ORTHO05D000152 1.4e-06 57.8 144 31.9
MELO3C031561.2 Cucumis melo HOM05D015411 ORTHO05D000152 1.8e-06 57.4 117 29.9
QL03p016847 Quercus lobata HOM05D000264 ORTHO05D000152 1.8e-06 57.4 126 36.5
QL03p027987 Quercus lobata HOM05D000264 ORTHO05D000152 1.8e-06 57.4 171 30.4
Sed0020174 Sechium edule HOM05D000264 ORTHO05D000152 1.8e-06 57.4 161 30.4
GSVIVG01036243001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.8e-06 57.4 137 32.8
CANSAT54G1206 Cannabis sativa HOM05D000264 ORTHO05D000152 2.4e-06 57.0 163 27.0
MD02G1117100 Malus domestica HOM05D000264 ORTHO05D000152 2.4e-06 57.0 106 40.6
QL03p016466 Quercus lobata HOM05D000264 ORTHO05D000152 2.4e-06 57.0 109 40.4
QL03p028264 Quercus lobata HOM05D015411 ORTHO05D000152 2.4e-06 57.0 161 32.3
CSS0047711 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000001 3.1e-06 56.6 129 34.1
Carub.0006s3361 Capsella rubella HOM05D000264 ORTHO05D000152 3.1e-06 56.6 148 33.1
Duzib151G0098 Durio zibethinus HOM05D000264 ORTHO05D000152 3.1e-06 56.6 180 30.6
FAN28G1654 Fragaria x ananassa HOM05D000264 ORTHO05D000152 3.1e-06 56.6 161 32.3
Lj8A605G12 Lonicera japonica HOM05D000454 ORTHO05D002637 3.1e-06 56.6 112 39.3
BcaC01g06675 Brassica carinata HOM05D000264 ORTHO05D000152 4.1e-06 56.2 148 34.5
C03p36730 Brassica napus HOM05D000264 ORTHO05D000152 4.1e-06 56.2 148 34.5
BolC3t15987H Brassica oleracea HOM05D000264 ORTHO05D000152 4.1e-06 56.2 148 34.5
MELO3C004404.2 Cucumis melo HOM05D000264 ORTHO05D000152 4.1e-06 56.2 139 33.8
Peaxi162Scf00071g00016 Petunia axillaris HOM05D000264 ORTHO05D000152 4.1e-06 56.2 127 34.6
TAR636G1934 Trochodendron aralioides HOM05D000264 ORTHO05D000152 4.1e-06 56.2 211 29.4
GSVIVG01001633001 Vitis vinifera HOM05D000264 ORTHO05D000152 4.1e-06 56.2 136 34.6
CsaV3_2G003910 Cucumis sativus L. HOM05D000264 ORTHO05D000152 5.4e-06 55.8 180 30.6
Prupe.4G145100 Prunus persica HOM05D000264 ORTHO05D000152 5.4e-06 55.8 158 30.4
QL03p027829 Quercus lobata HOM05D000264 ORTHO05D000152 7.0e-06 55.5 137 30.7
Hund19604 Selenicereus undatus HOM05D000264 ORTHO05D000152 7.0e-06 55.5 163 32.5
BcaB04g21355 Brassica carinata HOM05D000264 ORTHO05D000152 9.2e-06 55.1 147 32.0
BraA03t12545Z Brassica rapa HOM05D000264 ORTHO05D000152 9.2e-06 55.1 144 31.2
Duzib068G1351 Durio zibethinus HOM05D000264 ORTHO05D000152 9.2e-06 55.1 166 29.5
Gohir.D08G233800 Gossypium hirsutum HOM05D000264 ORTHO05D000152 9.2e-06 55.1 124 28.2
Gorai.004G248400 Gossypium raimondii HOM05D000264 ORTHO05D000152 9.2e-06 55.1 124 28.2
Manes.14G151654 Manihot esculenta HOM05D000264 ORTHO05D000152 9.2e-06 55.1 128 33.6
Thecc.10G061700 Theobroma cacao HOM05D000264 ORTHO05D000152 9.2e-06 55.1 175 30.3


User provided reference genes

Program Settings