Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p022295 Quercus lobata HOM05D002529 ORTHO05D002664 6.7e-47 190.3 92 100.0
QL08p059718 Quercus lobata HOM05D002529 ORTHO05D002664 1.2e-14 83.2 94 51.1
CiPaw.07G007900 Carya illinoinensis HOM05D002529 ORTHO05D002664 8.3e-13 77.0 90 48.9
CiPaw.08G178400 Carya illinoinensis HOM05D002529 ORTHO05D002664 2.4e-12 75.5 91 49.5
Manes.08G120700 Manihot esculenta HOM05D002529 ORTHO05D002664 2.4e-12 75.5 86 52.3
ATR0730G133 Amborella trichopoda HOM05D002529 ORTHO05D002664 3.1e-12 75.1 92 47.8
Lj4g0005583 Lotus japonicus HOM05D002529 ORTHO05D002664 9.2e-12 73.6 89 47.2
ATR0697G145 Amborella trichopoda HOM05D002529 ORTHO05D002664 1.2e-11 73.2 92 45.7
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 2.0e-11 72.4 86 47.7
Manes.15G029600 Manihot esculenta HOM05D002529 ORTHO05D002664 2.7e-11 72.0 81 46.9
Sabra05G0043300 Salix brachista HOM05D002529 ORTHO05D002664 2.7e-11 72.0 86 47.7
Nn5g28120 Nelumbo nucifera HOM05D002529 ORTHO05D002664 3.5e-11 71.6 96 46.9
Nn6g34079 Nelumbo nucifera HOM05D002529 ORTHO05D002664 3.5e-11 71.6 94 44.7
Potri.013G035000 Populus trichocarpa HOM05D002529 ORTHO05D002664 4.5e-11 71.2 86 47.7
Nn1g02343 Nelumbo nucifera HOM05D002529 ORTHO05D002664 5.9e-11 70.9 93 46.2
Potri.005G047901 Populus trichocarpa HOM05D002529 ORTHO05D002664 7.8e-11 70.5 86 46.5
TWI12G0397 Tripterygium wilfordii HOM05D002529 ORTHO05D002664 7.8e-11 70.5 86 51.2
TWI12G0415 Tripterygium wilfordii HOM05D000460 ORTHO05D000333 7.8e-11 70.5 86 51.2
vmacro19828 Vaccinium macrocarpon HOM05D002529 ORTHO05D002664 7.8e-11 70.5 88 48.9
Actinidia33839 Actinidia chinensis HOM05D002529 ORTHO05D002664 1.3e-10 69.7 83 48.2
ClCG11G014280 Citrullus lanatus HOM05D002529 ORTHO05D002664 1.3e-10 69.7 94 47.9
Prupe.6G025700 Prunus persica HOM05D002529 ORTHO05D002664 1.7e-10 69.3 89 49.4
Rhsim05G0150200 Rhododendron simsii HOM05D002529 ORTHO05D002664 2.9e-10 68.6 88 48.9
Sabra10G0056700 Salix brachista HOM05D002529 ORTHO05D002664 3.8e-10 68.2 79 50.6
GSVIVG01021882001 Vitis vinifera HOM05D002529 ORTHO05D002664 5.0e-10 67.8 94 47.9
Atru.chr4.2452 Acer truncatum HOM05D002529 ORTHO05D002664 6.6e-10 67.4 74 50.0
Dinv05119 Davidia involucrata HOM05D002529 ORTHO05D002664 8.6e-10 67.0 84 50.0
Lj1g0004297 Lotus japonicus HOM05D002529 ORTHO05D002664 8.6e-10 67.0 84 46.4
MD03G1029600 Malus domestica HOM05D002529 ORTHO05D002664 8.6e-10 67.0 89 47.2
Aqoxy3G00616 Aquilegia oxysepala HOM05D002529 ORTHO05D002664 1.1e-09 66.6 87 44.8
Cfa007075 Carpinus fangiana HOM05D001516 ORTHO05D001357 1.1e-09 66.6 91 51.6
Ciclev10002511m.g Citrus clementina HOM05D002529 ORTHO05D002664 1.1e-09 66.6 88 47.7
MD16G1195200 Malus domestica HOM05D002529 ORTHO05D002664 1.1e-09 66.6 76 46.1
Prupe.1G015200 Prunus persica HOM05D002529 ORTHO05D002664 1.1e-09 66.6 76 46.1
CSS0013639 Camellia sinensis var. sinensis HOM05D002529 ORTHO05D002664 1.5e-09 66.2 84 48.8
TAR636G3415 Trochodendron aralioides HOM05D002529 ORTHO05D002664 1.5e-09 66.2 92 45.7
PSO761G0286 Papaver somniferum HOM05D002529 ORTHO05D002664 1.9e-09 65.9 84 42.9
Potri.010G086800 Populus trichocarpa HOM05D002529 ORTHO05D002664 1.9e-09 65.9 79 49.4
Sed0025735 Sechium edule HOM05D002529 ORTHO05D002664 1.9e-09 65.9 94 46.8
Ciclev10006772m.g Citrus clementina HOM05D002529 ORTHO05D002664 2.5e-09 65.5 87 43.7
Prupe.6G337800 Prunus persica HOM05D002529 ORTHO05D002664 2.5e-09 65.5 89 46.1
Aqoxy1G03767 Aquilegia oxysepala HOM05D002529 ORTHO05D002664 5.6e-09 64.3 87 43.7
CSS0050505 Camellia sinensis var. sinensis HOM05D002529 ORTHO05D002664 5.6e-09 64.3 92 44.6
CsaV3_3G047670 Cucumis sativus L. HOM05D002529 ORTHO05D002664 5.6e-09 64.3 94 44.7
Glyma.19G009300 Glycine max HOM05D002529 ORTHO05D002664 5.6e-09 64.3 89 43.8
PSO210G7021 Papaver somniferum HOM05D002529 ORTHO05D002664 7.3e-09 63.9 84 42.9
TAR365G0359 Trochodendron aralioides HOM05D000460 ORTHO05D000333 7.3e-09 63.9 87 44.8
Dinv02599 Davidia involucrata HOM05D002529 ORTHO05D002664 9.5e-09 63.5 84 50.0
Lalb_Chr04g0264001 Lupinus albus HOM05D002529 ORTHO05D002664 9.5e-09 63.5 86 43.0
ClCG05G009860 Citrullus lanatus HOM05D002529 ORTHO05D002664 1.2e-08 63.2 84 46.4
MELO3C003557.2 Cucumis melo HOM05D002529 ORTHO05D002664 1.2e-08 63.2 94 44.7
Eucgr.H04397 Eucalyptus grandis HOM05D002529 ORTHO05D002664 1.2e-08 63.2 86 44.2
MD12G1235200 Malus domestica HOM05D002529 ORTHO05D002664 1.2e-08 63.2 86 47.7
PGSC0003DMG400027508 Solanum tuberosum HOM05D002529 ORTHO05D002664 1.2e-08 63.2 88 46.6
CDE02G3900 Ceratophyllum demersum HOM05D002529 ORTHO05D002664 1.6e-08 62.8 81 42.0
TAR374G0044 Trochodendron aralioides HOM05D002529 ORTHO05D002664 1.6e-08 62.8 82 46.3
Solyc01g096760.3 Solanum lycopersicum HOM05D002529 ORTHO05D002664 2.1e-08 62.4 96 44.8
Sopen01g040470 Solanum pennellii HOM05D002529 ORTHO05D002664 2.1e-08 62.4 96 44.8
Aqoxy2G03402 Aquilegia oxysepala HOM05D002529 ORTHO05D002664 2.8e-08 62.0 84 42.9
Atru.chr2.663 Acer truncatum HOM05D002529 ORTHO05D002664 3.6e-08 61.6 81 48.1
CSS0043802 Camellia sinensis var. sinensis HOM05D002529 ORTHO05D002664 3.6e-08 61.6 92 40.2
MD04G1217800 Malus domestica HOM05D002529 ORTHO05D002664 3.6e-08 61.6 89 44.9
RcHm_v2.0_Chr5g0076411 Rosa chinensis HOM05D002529 ORTHO05D002664 3.6e-08 61.6 89 41.6
Ca_23953_v3 Cicer arietinum L. HOM05D002529 ORTHO05D002664 4.7e-08 61.2 86 38.4
Ca_23959_v3 Cicer arietinum L. HOM05D002529 ORTHO05D002664 4.7e-08 61.2 86 38.4
VMungo0251G2818 Vigna mungo HOM05D002529 ORTHO05D002664 4.7e-08 61.2 89 41.6
Glyma.13G169100 Glycine max HOM05D002529 ORTHO05D002664 8.0e-08 60.5 86 43.0
MBI03_g47918_MAGBIO Magnolia biondii HOM05D002529 ORTHO05D002664 8.0e-08 60.5 90 41.1
PSO210G6081 Papaver somniferum HOM05D002529 ORTHO05D002664 8.0e-08 60.5 64 50.0
RcHm_v2.0_Chr1g0334081 Rosa chinensis HOM05D002529 ORTHO05D002664 8.0e-08 60.5 89 40.4
FvH4_5g30310 Fragaria vesca HOM05D002529 ORTHO05D002664 1.4e-07 59.7 89 41.6
TWI09G0630 Tripterygium wilfordii HOM05D002529 ORTHO05D002664 1.4e-07 59.7 86 40.7
PSO832G3905 Papaver somniferum HOM05D002529 ORTHO05D002664 1.8e-07 59.3 64 48.4
Phvul.003G288900 Phaseolus vulgaris HOM05D002529 ORTHO05D002664 1.8e-07 59.3 86 41.9
Hund12122 Selenicereus undatus HOM05D002529 ORTHO05D002664 1.8e-07 59.3 76 46.1
AagrBONN_evm.TU.Sc2ySwM_228.2752 Anthoceros agrestis HOM05D002529 ORTHO05D002664 2.3e-07 58.9 88 36.4
vmacro15348 Vaccinium macrocarpon HOM05D002529 ORTHO05D002664 2.3e-07 58.9 81 43.2
Cpa.g.sc114.63 Carica papaya HOM05D002529 ORTHO05D002664 3.0e-07 58.5 90 43.3
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 3.0e-07 58.5 76 46.1
Glyma.18G147100 Glycine max HOM05D002529 ORTHO05D002664 3.0e-07 58.5 86 44.2
PSO017G4668 Papaver somniferum HOM05D002529 ORTHO05D002664 3.0e-07 58.5 79 45.6
Psat2g156040 Pisum sativum HOM05D002529 ORTHO05D002664 3.0e-07 58.5 86 36.0
Sed0014372 Sechium edule HOM05D002529 ORTHO05D002664 3.0e-07 58.5 91 40.7
CANSAT78G1692 Cannabis sativa HOM05D002529 ORTHO05D002664 4.0e-07 58.2 78 43.6
DCAR_018312 Daucus carota HOM05D002529 ORTHO05D002664 4.0e-07 58.2 84 44.0
DCAR_024166 Daucus carota HOM05D002529 ORTHO05D002664 4.0e-07 58.2 76 40.8
FAN08G0687 Fragaria x ananassa HOM05D002529 ORTHO05D002664 4.0e-07 58.2 89 40.4
FAN13G2107 Fragaria x ananassa HOM05D002529 ORTHO05D002664 5.2e-07 57.8 89 40.4
CDE08G0620 Ceratophyllum demersum HOM05D007486 ORTHO05D003673 6.8e-07 57.4 85 36.5
Actinidia36955 Actinidia chinensis HOM05D002529 ORTHO05D002664 8.9e-07 57.0 78 44.9
Duzib128G1976 Durio zibethinus HOM05D002529 ORTHO05D002664 8.9e-07 57.0 87 44.8
Thecc.04G233300 Theobroma cacao HOM05D002529 ORTHO05D002664 8.9e-07 57.0 90 43.3
unitig_578.g16363 Utricularia gibba HOM05D000550 ORTHO05D000400 8.9e-07 57.0 85 43.5
CDE08G1586 Ceratophyllum demersum HOM05D002529 ORTHO05D002664 1.2e-06 56.6 84 36.9
ECA238G0509 Erigeron canadensis HOM05D002529 ORTHO05D002664 1.5e-06 56.2 84 40.5
Lsat_1_v5_gn_2_115920 Lactuca sativa HOM05D002529 ORTHO05D002664 1.5e-06 56.2 84 40.5
MSTRG.5850 Avicennia marina HOM05D002529 ORTHO05D002664 2.0e-06 55.8 84 42.9
CiPaw.01G167200 Carya illinoinensis HOM05D002529 ORTHO05D002664 2.0e-06 55.8 82 41.5
ClCG05G005150 Citrullus lanatus HOM05D002529 ORTHO05D002664 2.0e-06 55.8 82 41.5
Dinv14000 Davidia involucrata HOM05D002529 ORTHO05D002664 2.0e-06 55.8 88 40.9
MD11G1033000 Malus domestica HOM05D002529 ORTHO05D002664 2.6e-06 55.5 92 43.5
VMungo1383G2706 Vigna mungo HOM05D002529 ORTHO05D002664 2.6e-06 55.5 86 39.5
CAN.G134.40 Capsicum annuum HOM05D002529 ORTHO05D002664 3.4e-06 55.1 84 42.9
Duzib212G0919 Durio zibethinus HOM05D002529 ORTHO05D002664 3.4e-06 55.1 76 46.1
Hma1.2p1_0083F.1_g042670 Hydrangea macrophylla HOM05D002529 ORTHO05D002664 3.4e-06 55.1 94 42.6
Lsat_1_v5_gn_1_56180 Lactuca sativa HOM05D002529 ORTHO05D002664 3.4e-06 55.1 84 39.3
Thecc.05G290400 Theobroma cacao HOM05D002529 ORTHO05D002664 3.4e-06 55.1 88 43.2
CANSAT54G0996 Cannabis sativa HOM05D002529 ORTHO05D002664 4.4e-06 54.7 94 42.6
Sed0006923 Sechium edule HOM05D002529 ORTHO05D002664 4.4e-06 54.7 82 40.2
MELO3C031694.2 Cucumis melo HOM05D002529 ORTHO05D002664 5.7e-06 54.3 82 40.2
Duzib177G0239 Durio zibethinus HOM05D000460 ORTHO05D000333 5.7e-06 54.3 87 43.7
HanXRQChr07g0200741 Helianthus annuus HOM05D002529 ORTHO05D002664 5.7e-06 54.3 84 38.1
Hma1.2p1_0654F.1_g196630 Hydrangea macrophylla HOM05D002529 ORTHO05D002664 5.7e-06 54.3 89 40.4
TPR.G20395 Trifolium pratense HOM05D002529 ORTHO05D002664 5.7e-06 54.3 79 39.2
GSVIVG01017990001 Vitis vinifera HOM05D002529 ORTHO05D002664 5.7e-06 54.3 76 43.4
RcHm_v2.0_Chr4g0416031 Rosa chinensis HOM05D002529 ORTHO05D002664 7.5e-06 53.9 76 42.1


User provided reference genes

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