Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p100837 Quercus lobata HOM05D000062 ORTHO05D337859 4.3e-33 144.1 71 100.0
Phvul.006G219600 Phaseolus vulgaris HOM05D000062 ORTHO05D000043 1.9e-12 75.5 50 78.0
AUR62040144 Chenopodium quinoa HOM05D000062 ORTHO05D000043 4.1e-12 74.3 50 78.0
CiPaw.06G174500 Carya illinoinensis HOM05D000062 ORTHO05D000043 5.4e-12 73.9 50 76.0
Glyma.12G166200 Glycine max HOM05D000062 ORTHO05D000043 1.6e-11 72.4 50 76.0
VMungo0540G1467 Vigna mungo HOM05D000062 ORTHO05D000043 1.6e-11 72.4 50 76.0
Hund15447 Selenicereus undatus HOM05D000062 ORTHO05D000043 2.1e-11 72.0 50 76.0
ECA234G2292 Erigeron canadensis HOM05D000062 ORTHO05D000043 2.7e-11 71.6 50 78.0
FvH4_7g07430 Fragaria vesca HOM05D000062 ORTHO05D000043 2.7e-11 71.6 53 77.4
FAN01G1387 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.7e-11 71.6 53 77.4
FAN03G1201 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.7e-11 71.6 53 77.4
FAN06G2693 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.7e-11 71.6 53 77.4
FAN10G3215 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.7e-11 71.6 53 77.4
Phvul.006G219500 Phaseolus vulgaris HOM05D000062 ORTHO05D000043 3.5e-11 71.2 50 76.0
Potri.004G224400 Populus trichocarpa HOM05D000062 ORTHO05D000043 6.0e-11 70.5 50 74.0
RcHm_v2.0_Chr1g0339531 Rosa chinensis HOM05D000062 ORTHO05D000043 6.0e-11 70.5 53 75.5
EL10Ac6g14038 Beta vulgaris HOM05D000062 ORTHO05D000043 7.8e-11 70.1 50 74.0
CSS0046427 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D000043 7.8e-11 70.1 51 76.5
Sed0027286 Sechium edule HOM05D000062 ORTHO05D000043 7.8e-11 70.1 50 78.0
Oeu010209.2 Olea europaea HOM05D000062 ORTHO05D000043 1.0e-10 69.7 50 74.0
Ca_00036_v3 Cicer arietinum L. HOM05D000062 ORTHO05D000043 1.3e-10 69.3 50 76.0
Duzib212G0560 Durio zibethinus HOM05D000062 ORTHO05D000043 1.7e-10 68.9 51 70.6
Sabra01G0170600 Salix brachista HOM05D000062 ORTHO05D000043 1.7e-10 68.9 50 72.0
Sabra01G0170700 Salix brachista HOM05D000062 ORTHO05D000043 1.7e-10 68.9 50 72.0
ClCG06G009740 Citrullus lanatus HOM05D000062 ORTHO05D000043 2.3e-10 68.6 51 78.4
Gohir.D02G007600 Gossypium hirsutum HOM05D000062 ORTHO05D000043 2.3e-10 68.6 50 74.0
Gorai.005G009100 Gossypium raimondii HOM05D000062 ORTHO05D000043 2.3e-10 68.6 50 74.0
Peaxi162Scf00011g01425 Petunia axillaris HOM05D000062 ORTHO05D000043 2.3e-10 68.6 50 72.0
Glyma.16G002500 Glycine max HOM05D000062 ORTHO05D000043 3.0e-10 68.2 50 76.0
Gohir.A10G145100 Gossypium hirsutum HOM05D000062 ORTHO05D000043 3.0e-10 68.2 50 76.0
MD08G1242400 Malus domestica HOM05D000062 ORTHO05D000043 3.0e-10 68.2 51 72.5
Potri.003G006300 Populus trichocarpa HOM05D000062 ORTHO05D000043 3.9e-10 67.8 50 70.0
Manes.07G024700 Manihot esculenta HOM05D000062 ORTHO05D000043 6.6e-10 67.0 50 72.0
CSS0027513 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D000043 8.6e-10 66.6 51 74.5
CSS0034363 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D000043 8.6e-10 66.6 51 74.5
MELO3C020341.2 Cucumis melo HOM05D000062 ORTHO05D000043 8.6e-10 66.6 51 76.5
Duzib268G0500 Durio zibethinus HOM05D000062 ORTHO05D000043 8.6e-10 66.6 50 70.0
CiPaw.05G004000 Carya illinoinensis HOM05D000062 ORTHO05D000043 1.1e-09 66.2 52 71.2
vmacro01709 Vaccinium macrocarpon HOM05D000062 ORTHO05D000043 1.1e-09 66.2 50 72.0
Ah.03g135290 Amaranthus hybridus HOM05D000062 ORTHO05D000043 1.5e-09 65.9 51 70.6
Nn2g14041 Nelumbo nucifera HOM05D000062 ORTHO05D000043 1.5e-09 65.9 52 71.2
Gohir.A02G007800 Gossypium hirsutum HOM05D000062 ORTHO05D000043 1.9e-09 65.5 50 72.0
MD15G1436200 Malus domestica HOM05D000062 ORTHO05D000043 1.9e-09 65.5 52 73.1
HanXRQChr10g0299511 Helianthus annuus HOM05D000062 ORTHO05D000043 2.5e-09 65.1 51 70.6
MD15G1436300 Malus domestica HOM05D000062 ORTHO05D000043 2.5e-09 65.1 51 70.6
TWI75G1661 Tripterygium wilfordii HOM05D000062 ORTHO05D000043 2.5e-09 65.1 50 70.0
Lalb_Chr15g0090771 Lupinus albus HOM05D000062 ORTHO05D000043 3.3e-09 64.7 52 73.1
TAR628G1688 Trochodendron aralioides HOM05D000062 ORTHO05D000043 3.3e-09 64.7 51 70.6
Duzib151G0488 Durio zibethinus HOM05D000062 ORTHO05D000043 5.6e-09 63.9 50 68.0
Ciclev10003537m.g Citrus clementina HOM05D000062 ORTHO05D015787 7.3e-09 63.5 50 66.0
Ciclev10003758m.g Citrus clementina HOM05D000062 ORTHO05D000043 7.3e-09 63.5 50 66.0
arahy.Tifrunner.gnm1.ann1.3T3M0P Arachis hypogaea HOM05D000062 ORTHO05D000043 9.5e-09 63.2 50 74.0
arahy.Tifrunner.gnm1.ann1.VUP4LL Arachis hypogaea HOM05D000062 ORTHO05D000043 9.5e-09 63.2 50 74.0
arahy.Tifrunner.gnm1.ann1.Z0X0W1 Arachis hypogaea HOM05D000062 ORTHO05D000043 9.5e-09 63.2 50 74.0
TWI59G0736 Tripterygium wilfordii HOM05D000062 ORTHO05D000043 1.2e-08 62.8 50 68.0
Rhsim11G0122200 Rhododendron simsii HOM05D000062 ORTHO05D000043 2.1e-08 62.0 50 72.0
CANSAT11G1111 Cannabis sativa HOM05D000062 ORTHO05D000043 2.8e-08 61.6 54 66.7
ECA240G0462 Erigeron canadensis HOM05D000062 ORTHO05D000043 2.8e-08 61.6 50 70.0
FAN04G0132 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.8e-08 61.6 52 67.3
FAN18G1622 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.8e-08 61.6 52 67.3
Lj1g0025507 Lotus japonicus HOM05D000062 ORTHO05D000043 2.8e-08 61.6 53 69.8
Gohir.D10G121900 Gossypium hirsutum HOM05D000062 ORTHO05D000043 3.6e-08 61.2 50 70.0
Gorai.011G134000 Gossypium raimondii HOM05D000062 ORTHO05D000043 3.6e-08 61.2 50 70.0
Prupe.1G078200 Prunus persica HOM05D000062 ORTHO05D000043 3.6e-08 61.2 53 71.7
PGR142G2534 Punica granatum HOM05D000062 ORTHO05D000043 3.6e-08 61.2 51 72.5
Ah.03g136910 Amaranthus hybridus HOM05D000062 ORTHO05D000043 4.7e-08 60.8 51 68.6
RcHm_v2.0_Chr7g0220581 Rosa chinensis HOM05D000062 ORTHO05D000043 4.7e-08 60.8 55 65.5
DCAR_001745 Daucus carota HOM05D000062 ORTHO05D000043 6.2e-08 60.5 51 68.6
HanXRQChr03g0067941 Helianthus annuus HOM05D000062 ORTHO05D000043 6.2e-08 60.5 51 72.5
PSO063G2006 Papaver somniferum HOM05D000062 ORTHO05D000043 8.1e-08 60.1 52 71.2
PSO170G2349 Papaver somniferum HOM05D000062 ORTHO05D000043 8.1e-08 60.1 52 71.2
Nn3g19210 Nelumbo nucifera HOM05D000062 ORTHO05D000043 1.4e-07 59.3 51 66.7
CDE02G4510 Ceratophyllum demersum HOM05D000062 ORTHO05D000043 1.8e-07 58.9 50 64.0
Lj6g0002712 Lotus japonicus HOM05D000062 ORTHO05D000043 1.8e-07 58.9 52 67.3
Lalb_Chr20g0123751 Lupinus albus HOM05D000062 ORTHO05D000043 1.8e-07 58.9 51 66.7
TAR381G0445 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.8e-07 58.9 50 66.0
Sc07g0005260 Simmondsia chinensis HOM05D000062 ORTHO05D000043 2.4e-07 58.5 50 70.0
Gohir.D09G212600 Gossypium hirsutum HOM05D000062 ORTHO05D000043 3.1e-07 58.2 50 64.0
Gorai.006G232400 Gossypium raimondii HOM05D000062 ORTHO05D000043 3.1e-07 58.2 50 64.0
DCAR_006667 Daucus carota HOM05D000062 ORTHO05D000043 5.2e-07 57.4 52 69.2
MBI03_g01210_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D000043 5.2e-07 57.4 51 68.6
Rhsim11G0122300 Rhododendron simsii HOM05D000062 ORTHO05D000043 5.2e-07 57.4 50 64.0
MSTRG.27865 Avicennia marina HOM05D000062 ORTHO05D000043 6.8e-07 57.0 50 68.0
AUR62040617 Chenopodium quinoa HOM05D000062 ORTHO05D000043 6.8e-07 57.0 50 66.0
Oeu045915.1 Olea europaea HOM05D000062 ORTHO05D000043 6.8e-07 57.0 50 64.0
Cpa.g.sc113.35 Carica papaya HOM05D000062 ORTHO05D000043 8.9e-07 56.6 50 64.0
Migut.N00844 Erythranthe guttata HOM05D000062 ORTHO05D000043 8.9e-07 56.6 50 66.0
QL02p100831 Quercus lobata HOM05D000062 ORTHO05D000043 8.9e-07 56.6 54 63.0
unitig_8.g2952 Utricularia gibba HOM05D000062 ORTHO05D000043 8.9e-07 56.6 51 68.6
MBI06_g06707_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D000043 1.2e-06 56.2 51 66.7
Ciclev10000433m.g Citrus clementina HOM05D000062 ORTHO05D000043 1.5e-06 55.8 50 64.0
THA.LOC104809030 Tarenaya hassleriana HOM05D000062 ORTHO05D000043 1.5e-06 55.8 50 62.0
DCAR_025330 Daucus carota HOM05D000062 ORTHO05D000043 2.6e-06 55.1 50 62.0
Gohir.A09G213614 Gossypium hirsutum HOM05D000062 ORTHO05D000043 2.6e-06 55.1 50 60.0
HanXRQChr05g0131461 Helianthus annuus HOM05D000062 ORTHO05D000043 2.6e-06 55.1 50 62.0
Medtr2g005690 Medicago truncatula HOM05D000062 ORTHO05D000043 2.6e-06 55.1 52 67.3
Actinidia38996 Actinidia chinensis HOM05D000062 ORTHO05D015787 3.4e-06 54.7 50 62.0
CDE07G1893 Ceratophyllum demersum HOM05D000062 ORTHO05D000043 3.4e-06 54.7 51 66.7
Migut.B00755 Erythranthe guttata HOM05D000062 ORTHO05D000043 3.4e-06 54.7 50 66.0
DCAR_025327 Daucus carota HOM05D000062 ORTHO05D000043 4.4e-06 54.3 50 62.0
Eucgr.I02771 Eucalyptus grandis HOM05D000062 ORTHO05D000043 4.4e-06 54.3 57 59.6
Os05g0303000 Oryza sativa ssp. japonica HOM05D000062 ORTHO05D000043 4.4e-06 54.3 51 66.7
SGA_v2.0_scaffold456G51926 Striga asiatica HOM05D000062 ORTHO05D000043 4.4e-06 54.3 53 62.3
HanXRQChr09g0249071 Helianthus annuus HOM05D000062 ORTHO05D000043 5.8e-06 53.9 50 62.0
Lj9C298T4 Lonicera japonica HOM05D000062 ORTHO05D000043 5.8e-06 53.9 53 62.3
Zm00001eb053750 Zea mays HOM05D000062 ORTHO05D000043 5.8e-06 53.9 51 64.7
CDE04G3227 Ceratophyllum demersum HOM05D000062 ORTHO05D000043 9.9e-06 53.1 51 64.7


User provided reference genes

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