Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p069882 Quercus lobata HOM05D010918 ORTHO05D010815 7.7e-53 210.3 113 100.0
Cfa007173 Carpinus fangiana HOM05D010918 ORTHO05D010815 5.4e-30 134.4 111 70.3
CiPaw.03G003100 Carya illinoinensis HOM05D009379 ORTHO05D010815 3.6e-26 121.7 103 67.0
Haze_14937 Corylus avellana HOM05D000001 ORTHO05D000003 4.9e-23 111.3 89 71.9
Manes.04G092250 Manihot esculenta HOM05D009379 ORTHO05D010815 1.1e-17 93.6 115 53.0
Lalb_Chr24g0403191 Lupinus albus HOM05D009379 ORTHO05D010815 6.4e-15 84.3 112 46.4
Manes.11G077600 Manihot esculenta HOM05D009379 ORTHO05D010815 6.4e-15 84.3 103 52.4
TAR371G1162 Trochodendron aralioides HOM05D010918 ORTHO05D010815 5.4e-14 81.3 106 52.8
Potri.017G060400 Populus trichocarpa HOM05D010918 ORTHO05D010815 3.5e-13 78.6 103 50.5
Glyma.16G049700 Glycine max HOM05D009379 ORTHO05D010815 1.0e-12 77.0 92 56.5
RcHm_v2.0_Chr2g0176391 Rosa chinensis HOM05D010918 ORTHO05D010815 3.9e-12 75.1 122 50.8
Phvul.001G086200 Phaseolus vulgaris HOM05D009379 ORTHO05D010815 1.5e-11 73.2 89 50.6
Glyma.19G101500 Glycine max HOM05D009379 ORTHO05D010815 1.9e-11 72.8 89 51.7
Thecc.04G045800 Theobroma cacao HOM05D010918 ORTHO05D010815 2.5e-11 72.4 112 49.1
Rhsim10G0001800 Rhododendron simsii HOM05D000001 ORTHO05D000003 7.3e-11 70.9 100 49.0
Duzib147G1198 Durio zibethinus HOM05D010918 ORTHO05D010815 1.6e-10 69.7 114 50.0
GSVIVG01033003001 Vitis vinifera HOM05D005312 ORTHO05D006459 1.4e-09 66.6 81 50.6
Glyma.16G146800 Glycine max HOM05D009379 ORTHO05D010815 4.0e-09 65.1 114 44.7
Cpa.g.sc70.79 Carica papaya HOM05D010918 ORTHO05D010815 6.8e-09 64.3 88 53.4
FAN05G3850 Fragaria x ananassa HOM05D010918 ORTHO05D010815 6.8e-09 64.3 109 48.6
THA.LOC104805305 Tarenaya hassleriana HOM05D009379 ORTHO05D010815 1.5e-08 63.2 89 47.2
Phvul.004G070400 Phaseolus vulgaris HOM05D009379 ORTHO05D010815 2.0e-08 62.8 106 41.5
COL.COLO4_13348 Corchorus olitorius HOM05D010918 ORTHO05D010815 2.6e-08 62.4 113 46.0
Sabra17G0054200 Salix brachista HOM05D001116 ORTHO05D001028 2.6e-08 62.4 101 45.5
VMungo1383G0128 Vigna mungo HOM05D009379 ORTHO05D010815 9.9e-08 60.5 99 44.4
FAN14G2957 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.3e-07 60.1 95 50.5
Sed0007104 Sechium edule HOM05D010918 ORTHO05D010815 3.7e-07 58.5 106 43.4
Carub.0001s1259 Capsella rubella HOM05D009379 ORTHO05D010815 6.4e-07 57.8 87 44.8
Gohir.D10G079900 Gossypium hirsutum HOM05D010918 ORTHO05D010815 6.4e-07 57.8 84 51.2
AT1G12845 Arabidopsis thaliana HOM05D009379 ORTHO05D010815 1.1e-06 57.0 81 43.2
Gohir.A10G071200 Gossypium hirsutum HOM05D010918 ORTHO05D010815 1.1e-06 57.0 94 48.9
Thhalv10010043m.g Eutrema salsugineum HOM05D009379 ORTHO05D010815 1.4e-06 56.6 86 44.2
Gorai.011G087000 Gossypium raimondii HOM05D010918 ORTHO05D010815 2.4e-06 55.8 96 46.9
AL1G24490 Arabidopsis lyrata HOM05D009379 ORTHO05D010815 3.2e-06 55.5 81 42.0
MD09G1004200 Malus domestica HOM05D010918 ORTHO05D010815 7.1e-06 54.3 98 46.9
Nn3g16306 Nelumbo nucifera HOM05D010918 ORTHO05D048567 7.1e-06 54.3 115 44.3


User provided reference genes

Program Settings