Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p057492 Quercus lobata HOM05D001384 ORTHO05D001215 2.3e-35 151.8 79 100.0
QL02p057804 Quercus lobata HOM05D009020 ORTHO05D010722 3.3e-18 94.7 47 100.0
QL04p058637 Quercus lobata HOM05D001384 ORTHO05D001215 9.9e-07 56.6 32 90.6
QL04p059433 Quercus lobata HOM05D001384 ORTHO05D001215 9.9e-07 56.6 32 90.6
Thecc.01G347500 Theobroma cacao HOM05D001384 ORTHO05D001215 1.3e-06 56.2 49 63.3
CsaV3_3G008420 Cucumis sativus L. HOM05D001384 ORTHO05D001215 2.2e-06 55.5 32 90.6
THA.LOC104817336 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 2.2e-06 55.5 60 56.7
Haze_15620 Corylus avellana HOM05D001384 ORTHO05D001215 3.8e-06 54.7 31 90.3
ClCG05G001090 Citrullus lanatus HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
COL.COLO4_06332 Corchorus olitorius HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
Duzib133G0751 Durio zibethinus HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
Duzib138G1328 Durio zibethinus HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
FAN01G1051 Fragaria x ananassa HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
FAN06G2635 Fragaria x ananassa HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
FAN06G3780 Fragaria x ananassa HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
FAN10G1694 Fragaria x ananassa HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
FAN10G3769 Fragaria x ananassa HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
RcHm_v2.0_Chr1g0358781 Rosa chinensis HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
Sed0001168 Sechium edule HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
TAR636G2986 Trochodendron aralioides HOM05D001384 ORTHO05D001215 4.9e-06 54.3 32 87.5
Actinidia02805 Actinidia chinensis HOM05D001384 ORTHO05D001215 6.4e-06 53.9 32 84.4
Actinidia20196 Actinidia chinensis HOM05D001384 ORTHO05D001215 6.4e-06 53.9 32 87.5
Gohir.A12G110700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 6.4e-06 53.9 32 87.5
Gohir.D12G114000 Gossypium hirsutum HOM05D001384 ORTHO05D001215 6.4e-06 53.9 32 87.5
Gorai.008G123500 Gossypium raimondii HOM05D001384 ORTHO05D001215 6.4e-06 53.9 32 87.5
Manes.05G026100 Manihot esculenta HOM05D001384 ORTHO05D001215 6.4e-06 53.9 32 84.4
Cpa.g.sc194.9 Carica papaya HOM05D001384 ORTHO05D001215 8.4e-06 53.5 32 87.5
FAN03G0436 Fragaria x ananassa HOM05D001384 ORTHO05D001215 8.4e-06 53.5 32 87.5
Gohir.A11G094700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 8.4e-06 53.5 32 87.5
Gohir.D11G099700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 8.4e-06 53.5 32 87.5
Gorai.007G105900 Gossypium raimondii HOM05D001384 ORTHO05D001215 8.4e-06 53.5 32 87.5
Nitab4.5_0009232g0020 Nicotiana tabacum HOM05D001384 ORTHO05D001215 8.4e-06 53.5 59 54.2


User provided reference genes

Program Settings